RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 GNPATO15228 680 aa18.6■□□□□ 0.57
GGA3-208ENST00000579743 SULT6B1Q6IMI4 303 aa18.6■□□□□ 0.57
GGA3-208ENST00000579743 RBM42Q9BTD8 480 aaKnown RBP18.6■□□□□ 0.57
GGA3-208ENST00000579743 ATG3Q9NT62 314 aa18.6■□□□□ 0.57
GGA3-208ENST00000579743 CHD4Q14839 1912 aa18.59■□□□□ 0.57
GGA3-208ENST00000579743 ZNF784Q8NCA9 323 aaPredicted RBP18.59■□□□□ 0.57
GGA3-208ENST00000579743 AMER1Q5JTC6 1135 aaPredicted RBP18.58■□□□□ 0.56
GGA3-208ENST00000579743 LINC00116Q8NCU8 138 aa18.58■□□□□ 0.56
GGA3-208ENST00000579743 NLGN2Q8NFZ4 835 aa18.58■□□□□ 0.56
GGA3-208ENST00000579743 RTCBQ9Y3I0 505 aaKnown RBP18.58■□□□□ 0.56
GGA3-208ENST00000579743 IL13P35225 146 aa18.56■□□□□ 0.56
GGA3-208ENST00000579743 TRAPPC3LQ5T215 181 aa18.56■□□□□ 0.56
GGA3-208ENST00000579743 ADRA2BP18089 450 aa18.55■□□□□ 0.56
GGA3-208ENST00000579743 ITPK1Q13572 414 aa18.55■□□□□ 0.56
GGA3-208ENST00000579743 RC3H1Q5TC82 1133 aaKnown RBP18.55■□□□□ 0.56
GGA3-208ENST00000579743 AEBP1Q8IUX7 1158 aa18.55■□□□□ 0.56
GGA3-208ENST00000579743 CC2D1BQ5T0F9 858 aaKnown RBP18.54■□□□□ 0.56
GGA3-208ENST00000579743 KDRP35968 1356 aa18.54■□□□□ 0.56
GGA3-208ENST00000579743 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
GGA3-208ENST00000579743 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
GGA3-208ENST00000579743 UBR3Q6ZT12 1888 aa18.53■□□□□ 0.56
GGA3-208ENST00000579743 NLGN1Q8N2Q7 840 aa18.53■□□□□ 0.56
GGA3-208ENST00000579743 NFATC2IPQ8NCF5 419 aa18.53■□□□□ 0.56
GGA3-208ENST00000579743 RFC4P35249 363 aa18.52■□□□□ 0.56
GGA3-208ENST00000579743 CNTNAP4Q9C0A0 1308 aa18.51■□□□□ 0.55
GGA3-208ENST00000579743 PTCD1O75127 700 aaKnown RBP18.51■□□□□ 0.55
GGA3-208ENST00000579743 PER1O15534 1290 aaPredicted RBP18.5■□□□□ 0.55
GGA3-208ENST00000579743 RPS6KA4O75676 772 aa18.5■□□□□ 0.55
GGA3-208ENST00000579743 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
GGA3-208ENST00000579743 YBX3P16989 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
GGA3-208ENST00000579743 AMIGO3Q86WK7 504 aa18.49■□□□□ 0.55
GGA3-208ENST00000579743 ZNF831Q5JPB2 1677 aa18.49■□□□□ 0.55
GGA3-208ENST00000579743 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
GGA3-208ENST00000579743 MMP10P09238 476 aa18.48■□□□□ 0.55
GGA3-208ENST00000579743 HMOX1P09601 288 aa18.48■□□□□ 0.55
GGA3-208ENST00000579743 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
GGA3-208ENST00000579743 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
GGA3-208ENST00000579743 ARHGEF1Q92888 912 aaKnown RBP18.47■□□□□ 0.55
GGA3-208ENST00000579743 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
GGA3-208ENST00000579743 SLC4A9Q96Q91 983 aa18.46■□□□□ 0.55
GGA3-208ENST00000579743 SLC52A2Q9HAB3 445 aa18.46■□□□□ 0.55
GGA3-208ENST00000579743 CCDC87Q9NVE4 849 aa18.46■□□□□ 0.55
GGA3-208ENST00000579743 PARP3Q9Y6F1 533 aa18.46■□□□□ 0.55
GGA3-208ENST00000579743 U2SURPO15042 1029 aaKnown RBP18.45■□□□□ 0.54
GGA3-208ENST00000579743 GIGYF1O75420 1035 aaPredicted RBP18.45■□□□□ 0.54
GGA3-208ENST00000579743 CRKLP46109 303 aaKnown RBP18.45■□□□□ 0.54
GGA3-208ENST00000579743 RNMTO43148 476 aaKnown RBP18.44■□□□□ 0.54
GGA3-208ENST00000579743 TGFB2P61812 414 aa18.44■□□□□ 0.54
GGA3-208ENST00000579743 C1QTNF8P60827 252 aa18.42■□□□□ 0.54
GGA3-208ENST00000579743 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
GGA3-208ENST00000579743 GAS2L2Q8NHY3 880 aa18.42■□□□□ 0.54
GGA3-208ENST00000579743 NUDCQ9Y266 331 aa18.42■□□□□ 0.54
GGA3-208ENST00000579743 SCN11AQ9UI33 1791 aa18.42■□□□□ 0.54
GGA3-208ENST00000579743 ZPR1O75312 459 aa18.41■□□□□ 0.54
GGA3-208ENST00000579743 GYS1P13807 737 aa18.41■□□□□ 0.54
GGA3-208ENST00000579743 TTC5Q8N0Z6 440 aa18.41■□□□□ 0.54
GGA3-208ENST00000579743 LGR6Q9HBX8 967 aa18.41■□□□□ 0.54
GGA3-208ENST00000579743 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
GGA3-208ENST00000579743 TEFQ10587 303 aa18.4■□□□□ 0.54
GGA3-208ENST00000579743 VSIG10Q8N0Z9 540 aa18.39■□□□□ 0.53
GGA3-208ENST00000579743 GNAT3A8MTJ3 354 aa18.38■□□□□ 0.53
GGA3-208ENST00000579743 GPBP1L1Q9HC44 474 aaPredicted RBP18.38■□□□□ 0.53
GGA3-208ENST00000579743 WWC3Q9ULE0 1092 aa18.38■□□□□ 0.53
GGA3-208ENST00000579743 STARD3NLO95772 234 aa18.37■□□□□ 0.53
GGA3-208ENST00000579743 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
GGA3-208ENST00000579743 USP42Q9H9J4 1324 aaKnown RBP18.37■□□□□ 0.53
GGA3-208ENST00000579743 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
GGA3-208ENST00000579743 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
GGA3-208ENST00000579743 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
GGA3-208ENST00000579743 INTS5Q6P9B9 1019 aaKnown RBP18.36■□□□□ 0.53
GGA3-208ENST00000579743 NPM2Q86SE8 214 aaKnown RBP18.36■□□□□ 0.53
GGA3-208ENST00000579743 TEX13AQ9BXU3 409 aaPredicted RBP18.36■□□□□ 0.53
GGA3-208ENST00000579743 BCS1LQ9Y276 419 aa18.36■□□□□ 0.53
GGA3-208ENST00000579743 MRC1P22897 1456 aa18.35■□□□□ 0.53
GGA3-208ENST00000579743 ATP10DQ9P241 1426 aa18.35■□□□□ 0.53
GGA3-208ENST00000579743 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
GGA3-208ENST00000579743 CYP19A1P11511 503 aaPredicted RBP18.35■□□□□ 0.53
GGA3-208ENST00000579743 C10orf71Q711Q0 1435 aa18.34■□□□□ 0.53
GGA3-208ENST00000579743 MYH14Q7Z406 1995 aaKnown RBP18.34■□□□□ 0.53
GGA3-208ENST00000579743 SRP68Q9UHB9 627 aaKnown RBP18.34■□□□□ 0.53
GGA3-208ENST00000579743 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
GGA3-208ENST00000579743 A0A087WZG4 1122 aa18.33■□□□□ 0.52
GGA3-208ENST00000579743 FCHSD2O94868 740 aa18.33■□□□□ 0.52
GGA3-208ENST00000579743 NEFMP07197 916 aa18.33■□□□□ 0.52
GGA3-208ENST00000579743 FKBP8Q14318 412 aa18.33■□□□□ 0.52
GGA3-208ENST00000579743 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
GGA3-208ENST00000579743 UTRNP46939 3433 aa18.33■□□□□ 0.52
GGA3-208ENST00000579743 PXDNLA1KZ92 1463 aa18.33■□□□□ 0.52
GGA3-208ENST00000579743 TJP1Q07157 1748 aa18.32■□□□□ 0.52
GGA3-208ENST00000579743 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
GGA3-208ENST00000579743 DPEP1P16444 411 aa18.32■□□□□ 0.52
GGA3-208ENST00000579743 ARHGAP27Q6ZUM4 889 aa18.32■□□□□ 0.52
GGA3-208ENST00000579743 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
GGA3-208ENST00000579743 KIF13BQ9NQT8 1826 aa18.32■□□□□ 0.52
GGA3-208ENST00000579743 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
GGA3-208ENST00000579743 PRKAR2BP31323 418 aa18.31■□□□□ 0.52
GGA3-208ENST00000579743 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
GGA3-208ENST00000579743 USPL1Q5W0Q7 1092 aa18.31■□□□□ 0.52
GGA3-208ENST00000579743 ZNF790Q6PG37 636 aa18.31■□□□□ 0.52
GGA3-208ENST00000579743 NARFQ9UHQ1 456 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms