RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
CDK5RAP3-213ENST00000579605 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
CDK5RAP3-213ENST00000579605 ASAP1Q9ULH1 1129 aa18.67■□□□□ 0.58
CDK5RAP3-213ENST00000579605 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
CDK5RAP3-213ENST00000579605 PIM2Q9P1W9 311 aa18.65■□□□□ 0.58
CDK5RAP3-213ENST00000579605 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
CDK5RAP3-213ENST00000579605 N4BP2Q86UW6 1770 aaPredicted RBP18.65■□□□□ 0.58
CDK5RAP3-213ENST00000579605 SMG6Q86US8 1419 aaKnown RBP18.65■□□□□ 0.58
CDK5RAP3-213ENST00000579605 UBR3Q6ZT12 1888 aa18.65■□□□□ 0.58
CDK5RAP3-213ENST00000579605 KCNA3P22001 575 aa18.64■□□□□ 0.57
CDK5RAP3-213ENST00000579605 CARD11Q9BXL7 1154 aa18.64■□□□□ 0.57
CDK5RAP3-213ENST00000579605 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
CDK5RAP3-213ENST00000579605 RTCBQ9Y3I0 505 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-213ENST00000579605 DALRD3Q5D0E6 543 aaKnown RBP18.63■□□□□ 0.57
CDK5RAP3-213ENST00000579605 C10orf71Q711Q0 1435 aa18.63■□□□□ 0.57
CDK5RAP3-213ENST00000579605 SLC34A2O95436 690 aa18.62■□□□□ 0.57
CDK5RAP3-213ENST00000579605 ARHGEF1Q92888 912 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-213ENST00000579605 GGNBP2Q9H3C7 697 aa18.62■□□□□ 0.57
CDK5RAP3-213ENST00000579605 RTL1A6NKG5 1358 aa18.62■□□□□ 0.57
CDK5RAP3-213ENST00000579605 DCAF5Q96JK2 942 aa18.61■□□□□ 0.57
CDK5RAP3-213ENST00000579605 GYS1P13807 737 aa18.6■□□□□ 0.57
CDK5RAP3-213ENST00000579605 RFC4P35249 363 aa18.6■□□□□ 0.57
CDK5RAP3-213ENST00000579605 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
CDK5RAP3-213ENST00000579605 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
CDK5RAP3-213ENST00000579605 SPG7Q9UQ90 795 aa18.59■□□□□ 0.57
CDK5RAP3-213ENST00000579605 KIAA1551Q9HCM1 1747 aa18.59■□□□□ 0.57
CDK5RAP3-213ENST00000579605 CHRNA5P30532 468 aa18.58■□□□□ 0.56
CDK5RAP3-213ENST00000579605 NKX1-1Q15270 411 aaPredicted RBP18.58■□□□□ 0.56
CDK5RAP3-213ENST00000579605 VEGFAP15692 232 aaPredicted RBP18.57■□□□□ 0.56
CDK5RAP3-213ENST00000579605 INSRP06213 1382 aa18.56■□□□□ 0.56
CDK5RAP3-213ENST00000579605 FYB1O15117 783 aa18.56■□□□□ 0.56
CDK5RAP3-213ENST00000579605 RASSF7Q02833 373 aa18.56■□□□□ 0.56
CDK5RAP3-213ENST00000579605 PUS7Q96PZ0 661 aaKnown RBP18.55■□□□□ 0.56
CDK5RAP3-213ENST00000579605 MKRN1Q9UHC7 482 aaKnown RBP18.55■□□□□ 0.56
CDK5RAP3-213ENST00000579605 KIF13BQ9NQT8 1826 aa18.55■□□□□ 0.56
CDK5RAP3-213ENST00000579605 ITGB4P16144 1822 aa18.54■□□□□ 0.56
CDK5RAP3-213ENST00000579605 SLC4A9Q96Q91 983 aa18.54■□□□□ 0.56
CDK5RAP3-213ENST00000579605 RPS6KA4O75676 772 aa18.53■□□□□ 0.56
CDK5RAP3-213ENST00000579605 ADRA2BP18089 450 aa18.53■□□□□ 0.56
CDK5RAP3-213ENST00000579605 SRP68Q9UHB9 627 aaKnown RBP18.53■□□□□ 0.56
CDK5RAP3-213ENST00000579605 MAP2P11137 1827 aaKnown RBP18.52■□□□□ 0.56
CDK5RAP3-213ENST00000579605 GLTPD2A6NH11 291 aa18.52■□□□□ 0.56
CDK5RAP3-213ENST00000579605 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
CDK5RAP3-213ENST00000579605 FOXN1O15353 648 aa18.51■□□□□ 0.55
CDK5RAP3-213ENST00000579605 PHKG2P15735 406 aa18.51■□□□□ 0.55
CDK5RAP3-213ENST00000579605 FKBP8Q14318 412 aa18.51■□□□□ 0.55
CDK5RAP3-213ENST00000579605 RC3H1Q5TC82 1133 aaKnown RBP18.51■□□□□ 0.55
CDK5RAP3-213ENST00000579605 IFNL2Q8IZJ0 200 aa18.51■□□□□ 0.55
CDK5RAP3-213ENST00000579605 FLT4P35916 1363 aa18.51■□□□□ 0.55
CDK5RAP3-213ENST00000579605 C4AP0C0L4 1744 aa18.51■□□□□ 0.55
CDK5RAP3-213ENST00000579605 PKD1L3Q7Z443 1732 aa18.51■□□□□ 0.55
CDK5RAP3-213ENST00000579605 DDR1Q08345 913 aa18.5■□□□□ 0.55
CDK5RAP3-213ENST00000579605 EMILIN1Q9Y6C2 1016 aa18.5■□□□□ 0.55
CDK5RAP3-213ENST00000579605 LMNB1P20700 586 aa18.49■□□□□ 0.55
CDK5RAP3-213ENST00000579605 CNTNAP4Q9C0A0 1308 aa18.48■□□□□ 0.55
CDK5RAP3-213ENST00000579605 TNRC6CQ9HCJ0 1690 aaKnown RBP18.47■□□□□ 0.55
CDK5RAP3-213ENST00000579605 FAM161AQ3B820 660 aa18.46■□□□□ 0.55
CDK5RAP3-213ENST00000579605 EYA1Q99502 592 aa18.46■□□□□ 0.55
CDK5RAP3-213ENST00000579605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.46■□□□□ 0.551e-11■□□□□ 11.2
CDK5RAP3-213ENST00000579605 ZC3H4Q9UPT8 1303 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-213ENST00000579605 KDRP35968 1356 aa18.45■□□□□ 0.54
CDK5RAP3-213ENST00000579605 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
CDK5RAP3-213ENST00000579605 POTECB2RU33 542 aa18.45■□□□□ 0.54
CDK5RAP3-213ENST00000579605 PTCD1O75127 700 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-213ENST00000579605 TESK2Q96S53 571 aa18.45■□□□□ 0.54
CDK5RAP3-213ENST00000579605 PRDM10Q9NQV6 1147 aa18.45■□□□□ 0.54
CDK5RAP3-213ENST00000579605 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
CDK5RAP3-213ENST00000579605 ARFGEF1Q9Y6D6 1849 aa18.44■□□□□ 0.54
CDK5RAP3-213ENST00000579605 BRCA1P38398 1863 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP3-213ENST00000579605 AIDAQ96BJ3 306 aa18.44■□□□□ 0.54
CDK5RAP3-213ENST00000579605 POLRMTO00411 1230 aaKnown RBP18.43■□□□□ 0.54
CDK5RAP3-213ENST00000579605 CRKLP46109 303 aaKnown RBP18.43■□□□□ 0.54
CDK5RAP3-213ENST00000579605 CTCFP49711 727 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-213ENST00000579605 DPY19L2Q6NUT2 758 aa18.43■□□□□ 0.54
CDK5RAP3-213ENST00000579605 USP42Q9H9J4 1324 aaKnown RBP18.43■□□□□ 0.54
CDK5RAP3-213ENST00000579605 KIF24Q5T7B8 1368 aa18.42■□□□□ 0.54
CDK5RAP3-213ENST00000579605 ERVV-2B6SEH9 535 aa18.41■□□□□ 0.54
CDK5RAP3-213ENST00000579605 TM4SF1P30408 202 aa18.41■□□□□ 0.54
CDK5RAP3-213ENST00000579605 CABP4P57796 275 aa18.41■□□□□ 0.54
CDK5RAP3-213ENST00000579605 CHADLQ6NUI6 762 aa18.41■□□□□ 0.54
CDK5RAP3-213ENST00000579605 POTEIP0CG38 1075 aa18.4■□□□□ 0.54
CDK5RAP3-213ENST00000579605 POTEJP0CG39 1038 aa18.4■□□□□ 0.54
CDK5RAP3-213ENST00000579605 LBX1P52954 281 aa18.4■□□□□ 0.54
CDK5RAP3-213ENST00000579605 TTLL6Q8N841 843 aa18.4■□□□□ 0.54
CDK5RAP3-213ENST00000579605 ZNF219Q9P2Y4 722 aaPredicted RBP18.4■□□□□ 0.54
CDK5RAP3-213ENST00000579605 TONSLQ96HA7 1378 aa18.4■□□□□ 0.54
CDK5RAP3-213ENST00000579605 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
CDK5RAP3-213ENST00000579605 ZPR1O75312 459 aa18.39■□□□□ 0.53
CDK5RAP3-213ENST00000579605 USPL1Q5W0Q7 1092 aa18.39■□□□□ 0.53
CDK5RAP3-213ENST00000579605 SBF1O95248 1867 aa18.39■□□□□ 0.53
CDK5RAP3-213ENST00000579605 NFKBIEO00221 500 aa18.38■□□□□ 0.53
CDK5RAP3-213ENST00000579605 ABHD8Q96I13 439 aa18.38■□□□□ 0.53
CDK5RAP3-213ENST00000579605 NCAPD2Q15021 1401 aa18.38■□□□□ 0.53
CDK5RAP3-213ENST00000579605 VEGFBP49765 207 aa18.37■□□□□ 0.53
CDK5RAP3-213ENST00000579605 C2CD5Q86YS7 1000 aa18.37■□□□□ 0.53
CDK5RAP3-213ENST00000579605 PCDH10Q9P2E7 1040 aa18.37■□□□□ 0.53
CDK5RAP3-213ENST00000579605 WASHC2AQ641Q2 1341 aa18.37■□□□□ 0.53
CDK5RAP3-213ENST00000579605 CNTNAP1P78357 1384 aa18.37■□□□□ 0.53
CDK5RAP3-213ENST00000579605 ERFEQ4G0M1 354 aa18.36■□□□□ 0.53
CDK5RAP3-213ENST00000579605 SLC24A1O60721 1099 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms