RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 ARID4AP29374 1257 aaPredicted RBP8.02□□□□□ -1.13
DDX42-210ENST00000579539 CBLBQ13191 982 aa8.02□□□□□ -1.13
DDX42-210ENST00000579539 Q6ZVU0 165 aa8.02□□□□□ -1.13
DDX42-210ENST00000579539 DZIP3Q86Y13 1208 aaKnown RBP8.02□□□□□ -1.13
DDX42-210ENST00000579539 DEPDC4Q8N2C3 294 aa8.02□□□□□ -1.13
DDX42-210ENST00000579539 PGPEP1Q9NXJ5 209 aa8.02□□□□□ -1.13
DDX42-210ENST00000579539 NXF1Q9UBU9 619 aaKnown RBP8.02□□□□□ -1.13
DDX42-210ENST00000579539 ZBBXA8MT70 800 aa8.01□□□□□ -1.13
DDX42-210ENST00000579539 BMP2P12643 396 aa8.01□□□□□ -1.13
DDX42-210ENST00000579539 DHX9Q08211 1270 aaKnown RBP8.01□□□□□ -1.13
DDX42-210ENST00000579539 PTK7Q13308 1070 aa8.01□□□□□ -1.13
DDX42-210ENST00000579539 NBPF20Q3BBV1 942 aa8.01□□□□□ -1.13
DDX42-210ENST00000579539 CLP1Q92989 425 aaKnown RBP8.01□□□□□ -1.13
DDX42-210ENST00000579539 TSEN34Q9BSV6 310 aaKnown RBP8.01□□□□□ -1.13
DDX42-210ENST00000579539 ESPNB1AK53 854 aa8□□□□□ -1.13
DDX42-210ENST00000579539 UPP2O95045 317 aa8□□□□□ -1.13
DDX42-210ENST00000579539 BCL2L13Q9BXK5 485 aa8□□□□□ -1.13
DDX42-210ENST00000579539 TMPRSS4Q9NRS4 437 aa8□□□□□ -1.13
DDX42-210ENST00000579539 CDK11AQ9UQ88 783 aaPredicted RBP8□□□□□ -1.13
DDX42-210ENST00000579539 ERVH48-1M5A8F1 160 aa7.99□□□□□ -1.13
DDX42-210ENST00000579539 DEKP35659 375 aaKnown RBP7.99□□□□□ -1.13
DDX42-210ENST00000579539 SCNN1AP37088 669 aa7.99□□□□□ -1.13
DDX42-210ENST00000579539 SIRT1Q96EB6 747 aa7.99□□□□□ -1.13
DDX42-210ENST00000579539 MKRN1Q9UHC7 482 aaKnown RBP7.99□□□□□ -1.13
DDX42-210ENST00000579539 SOS2Q07890 1332 aaPredicted RBP7.99□□□□□ -1.13
DDX42-210ENST00000579539 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
DDX42-210ENST00000579539 RAB15P59190 212 aa7.98□□□□□ -1.13
DDX42-210ENST00000579539 NCOA4Q13772 614 aa7.98□□□□□ -1.13
DDX42-210ENST00000579539 NPAS4Q8IUM7 802 aa7.98□□□□□ -1.13
DDX42-210ENST00000579539 NPAS3Q8IXF0 933 aa7.98□□□□□ -1.13
DDX42-210ENST00000579539 GIPC2Q8TF65 315 aa7.98□□□□□ -1.13
DDX42-210ENST00000579539 WIPF1O43516 503 aa7.97□□□□□ -1.13
DDX42-210ENST00000579539 MAN1A2O60476 641 aa7.97□□□□□ -1.13
DDX42-210ENST00000579539 LILRA1O75019 489 aa7.97□□□□□ -1.13
DDX42-210ENST00000579539 VEGFBP49765 207 aa7.97□□□□□ -1.13
DDX42-210ENST00000579539 MARSP56192 900 aaKnown RBP7.97□□□□□ -1.13
DDX42-210ENST00000579539 ZNF784Q8NCA9 323 aaPredicted RBP7.97□□□□□ -1.13
DDX42-210ENST00000579539 DNMT3LQ9UJW3 386 aa7.97□□□□□ -1.13
DDX42-210ENST00000579539 PCDHB9Q9Y5E1 797 aa7.97□□□□□ -1.13
DDX42-210ENST00000579539 H3BM21 787 aa7.96□□□□□ -1.14
DDX42-210ENST00000579539 SPINT1O43278 529 aa7.96□□□□□ -1.14
DDX42-210ENST00000579539 EIF5BO60841 1220 aaKnown RBP7.96□□□□□ -1.14
DDX42-210ENST00000579539 GIGYF1O75420 1035 aaPredicted RBP7.96□□□□□ -1.14
DDX42-210ENST00000579539 TCF3P15923 654 aa7.96□□□□□ -1.14
DDX42-210ENST00000579539 RASA1P20936 1047 aa7.96□□□□□ -1.14
DDX42-210ENST00000579539 ADD1P35611 737 aaKnown RBP7.96□□□□□ -1.14
DDX42-210ENST00000579539 ANKMY2Q8IV38 441 aa7.96□□□□□ -1.14
DDX42-210ENST00000579539 FAM200AQ8TCP9 573 aa7.96□□□□□ -1.14
DDX42-210ENST00000579539 SLC16A10Q8TF71 515 aa7.96□□□□□ -1.14
DDX42-210ENST00000579539 AGBL1Q96MI9 1066 aa7.96□□□□□ -1.14
DDX42-210ENST00000579539 ATP5J2-PTCD1G3V325 749 aa7.95□□□□□ -1.14
DDX42-210ENST00000579539 LARP1Q6PKG0 1096 aaKnown RBP7.95□□□□□ -1.14
DDX42-210ENST00000579539 SEPT12Q8IYM1 358 aa7.95□□□□□ -1.14
DDX42-210ENST00000579539 ANKRD33BA6NCL7 494 aa7.94□□□□□ -1.14
DDX42-210ENST00000579539 TTLL8A6PVC2 850 aa7.94□□□□□ -1.14
DDX42-210ENST00000579539 RELBQ01201 579 aa7.94□□□□□ -1.14
DDX42-210ENST00000579539 GLIPR1L2Q4G1C9 344 aa7.94□□□□□ -1.14
DDX42-210ENST00000579539 KDF1Q8NAX2 398 aaPredicted RBP7.94□□□□□ -1.14
DDX42-210ENST00000579539 PUS7Q96PZ0 661 aaKnown RBP7.94□□□□□ -1.14
DDX42-210ENST00000579539 CDCA7Q9BWT1 371 aaPredicted RBP7.94□□□□□ -1.14
DDX42-210ENST00000579539 BIN2Q9UBW5 565 aaPredicted RBP7.94□□□□□ -1.14
DDX42-210ENST00000579539 HSP90B1P14625 803 aaKnown RBP7.93□□□□□ -1.14
DDX42-210ENST00000579539 DPYDQ12882 1025 aa7.93□□□□□ -1.14
DDX42-210ENST00000579539 PHTF2Q8N3S3 785 aa7.93□□□□□ -1.14
DDX42-210ENST00000579539 PLPP7Q8NBV4 271 aa7.93□□□□□ -1.14
DDX42-210ENST00000579539 ERBB4Q15303 1308 aa7.93□□□□□ -1.14
DDX42-210ENST00000579539 FIGNL2A6NMB9 653 aa7.92□□□□□ -1.14
DDX42-210ENST00000579539 SWI5Q1ZZU3 235 aa7.92□□□□□ -1.14
DDX42-210ENST00000579539 C1orf216Q8TAB5 229 aa7.92□□□□□ -1.14
DDX42-210ENST00000579539 IRF7Q92985 503 aa7.92□□□□□ -1.14
DDX42-210ENST00000579539 ZNF594Q96JF6 807 aaPredicted RBP7.92□□□□□ -1.14
DDX42-210ENST00000579539 ZNF395Q9H8N7 513 aaPredicted RBP7.92□□□□□ -1.14
DDX42-210ENST00000579539 CEP126Q9P2H0 1117 aa7.92□□□□□ -1.14
DDX42-210ENST00000579539 ADH1AP07327 375 aa7.91□□□□□ -1.14
DDX42-210ENST00000579539 GMPRP36959 345 aa7.91□□□□□ -1.14
DDX42-210ENST00000579539 CTSOP43234 321 aaPredicted RBP7.91□□□□□ -1.14
DDX42-210ENST00000579539 MCCD1P59942 119 aaPredicted RBP7.91□□□□□ -1.14
DDX42-210ENST00000579539 CLDN10P78369 228 aa7.91□□□□□ -1.14
DDX42-210ENST00000579539 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.91□□□□□ -1.14
DDX42-210ENST00000579539 SLFNL1Q499Z3 407 aa7.91□□□□□ -1.14
DDX42-210ENST00000579539 RNF135Q8IUD6 432 aa7.91□□□□□ -1.14
DDX42-210ENST00000579539 OGFOD1Q8N543 542 aa7.91□□□□□ -1.14
DDX42-210ENST00000579539 INSM2Q96T92 566 aaPredicted RBP7.91□□□□□ -1.14
DDX42-210ENST00000579539 CYLDQ9NQC7 956 aa7.91□□□□□ -1.14
DDX42-210ENST00000579539 CHIC2Q9UKJ5 165 aa7.91□□□□□ -1.14
DDX42-210ENST00000579539 CCER2I3L3R5 266 aa7.9□□□□□ -1.14
DDX42-210ENST00000579539 PPFIA3O75145 1194 aa7.9□□□□□ -1.14
DDX42-210ENST00000579539 PTGIRP43119 386 aa7.9□□□□□ -1.14
DDX42-210ENST00000579539 FBXO33Q7Z6M2 555 aa7.9□□□□□ -1.14
DDX42-210ENST00000579539 DKK1O94907 266 aa7.89□□□□□ -1.15
DDX42-210ENST00000579539 HMGB1P09429 215 aaKnown RBP7.89□□□□□ -1.15
DDX42-210ENST00000579539 VAMP1P23763 118 aa7.89□□□□□ -1.15
DDX42-210ENST00000579539 TAGLNQ01995 201 aaKnown RBP7.89□□□□□ -1.15
DDX42-210ENST00000579539 ZNF211Q13398 564 aaPredicted RBP7.89□□□□□ -1.15
DDX42-210ENST00000579539 CCDC125Q86Z20 511 aa7.89□□□□□ -1.15
DDX42-210ENST00000579539 FAM177A1Q8N128 213 aaPredicted RBP7.89□□□□□ -1.15
DDX42-210ENST00000579539 KIAA1024Q9UPX6 916 aa7.89□□□□□ -1.15
DDX42-210ENST00000579539 H3BRB1 525 aa7.88□□□□□ -1.15
DDX42-210ENST00000579539 PRMT3O60678 531 aa7.88□□□□□ -1.15
DDX42-210ENST00000579539 RECKO95980 971 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms