RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 MMP10P09238 476 aa13.3□□□□□ -0.28
MSI2-208ENST00000579466 EIF4A2Q14240 407 aaKnown RBP13.3□□□□□ -0.28
MSI2-208ENST00000579466 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
MSI2-208ENST00000579466 POLKQ9UBT6 870 aa13.3□□□□□ -0.28
MSI2-208ENST00000579466 C4AP0C0L4 1744 aa13.3□□□□□ -0.28
MSI2-208ENST00000579466 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
MSI2-208ENST00000579466 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
MSI2-208ENST00000579466 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
MSI2-208ENST00000579466 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
MSI2-208ENST00000579466 KDRP35968 1356 aa13.28□□□□□ -0.28
MSI2-208ENST00000579466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.29
MSI2-208ENST00000579466 BCS1LQ9Y276 419 aa13.27□□□□□ -0.29
MSI2-208ENST00000579466 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.29
MSI2-208ENST00000579466 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
MSI2-208ENST00000579466 HSPA6P17066 643 aa13.26□□□□□ -0.29
MSI2-208ENST00000579466 TRAPPC3LQ5T215 181 aa13.26□□□□□ -0.29
MSI2-208ENST00000579466 MYH14Q7Z406 1995 aaKnown RBP13.26□□□□□ -0.29
MSI2-208ENST00000579466 SLC4A9Q96Q91 983 aa13.26□□□□□ -0.29
MSI2-208ENST00000579466 KDM6AO15550 1401 aaPredicted RBP13.25□□□□□ -0.29
MSI2-208ENST00000579466 C10orf71Q711Q0 1435 aa13.25□□□□□ -0.29
MSI2-208ENST00000579466 TRIM26Q12899 539 aaPredicted RBP13.25□□□□□ -0.29
MSI2-208ENST00000579466 IFFO2Q5TF58 517 aa13.25□□□□□ -0.29
MSI2-208ENST00000579466 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
MSI2-208ENST00000579466 BRCA1P38398 1863 aaKnown RBP13.25□□□□□ -0.29
MSI2-208ENST00000579466 ARHGEF1Q92888 912 aaKnown RBP13.24□□□□□ -0.29
MSI2-208ENST00000579466 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
MSI2-208ENST00000579466 TJP1Q07157 1748 aa13.23□□□□□ -0.29
MSI2-208ENST00000579466 KIF3CO14782 793 aa13.23□□□□□ -0.29
MSI2-208ENST00000579466 PTCD1O75127 700 aaKnown RBP13.23□□□□□ -0.29
MSI2-208ENST00000579466 DPEP1P16444 411 aa13.23□□□□□ -0.29
MSI2-208ENST00000579466 RFC4P35249 363 aa13.23□□□□□ -0.29
MSI2-208ENST00000579466 CABP4P57796 275 aa13.23□□□□□ -0.29
MSI2-208ENST00000579466 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
MSI2-208ENST00000579466 AEBP1Q8IUX7 1158 aa13.23□□□□□ -0.29
MSI2-208ENST00000579466 FCHSD2O94868 740 aa13.22□□□□□ -0.29
MSI2-208ENST00000579466 PLEKHO1Q53GL0 409 aaPredicted RBP13.22□□□□□ -0.29
MSI2-208ENST00000579466 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
MSI2-208ENST00000579466 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
MSI2-208ENST00000579466 PCGF6Q9BYE7 350 aa13.22□□□□□ -0.29
MSI2-208ENST00000579466 CCDC87Q9NVE4 849 aa13.22□□□□□ -0.29
MSI2-208ENST00000579466 PARP3Q9Y6F1 533 aa13.22□□□□□ -0.29
MSI2-208ENST00000579466 VIRMAQ69YN4 1812 aaKnown RBP13.22□□□□□ -0.29
MSI2-208ENST00000579466 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
MSI2-208ENST00000579466 ARFGEF1Q9Y6D6 1849 aa13.21□□□□□ -0.29
MSI2-208ENST00000579466 ERVV-2B6SEH9 535 aa13.21□□□□□ -0.29
MSI2-208ENST00000579466 HSP90AB1P08238 724 aaKnown RBP13.21□□□□□ -0.29
MSI2-208ENST00000579466 GYS1P13807 737 aa13.21□□□□□ -0.29
MSI2-208ENST00000579466 PANK3Q9H999 370 aa13.21□□□□□ -0.29
MSI2-208ENST00000579466 SRP68Q9UHB9 627 aaKnown RBP13.21□□□□□ -0.29
MSI2-208ENST00000579466 SCN11AQ9UI33 1791 aa13.2□□□□□ -0.3
MSI2-208ENST00000579466 RPS6KA4O75676 772 aa13.2□□□□□ -0.3
MSI2-208ENST00000579466 MTHFSP49914 203 aa13.2□□□□□ -0.3
MSI2-208ENST00000579466 TGFB2P61812 414 aa13.2□□□□□ -0.3
MSI2-208ENST00000579466 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
MSI2-208ENST00000579466 NMRK2Q9NPI5 230 aa13.2□□□□□ -0.3
MSI2-208ENST00000579466 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
MSI2-208ENST00000579466 ADRA2BP18089 450 aa13.19□□□□□ -0.3
MSI2-208ENST00000579466 CRKLP46109 303 aaKnown RBP13.19□□□□□ -0.3
MSI2-208ENST00000579466 MORC1Q86VD1 984 aa13.19□□□□□ -0.3
MSI2-208ENST00000579466 AMOTQ4VCS5 1084 aa13.18□□□□□ -0.3
MSI2-208ENST00000579466 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
MSI2-208ENST00000579466 SULT6B1Q6IMI4 303 aa13.18□□□□□ -0.3
MSI2-208ENST00000579466 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
MSI2-208ENST00000579466 WDR90Q96KV7 1748 aa13.17□□□□□ -0.3
MSI2-208ENST00000579466 FKBP8Q14318 412 aa13.17□□□□□ -0.3
MSI2-208ENST00000579466 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
MSI2-208ENST00000579466 CHRNA5P30532 468 aa13.16□□□□□ -0.3
MSI2-208ENST00000579466 EIF4G2P78344 907 aaKnown RBP eCLIP13.16□□□□□ -0.3
MSI2-208ENST00000579466 DDR1Q08345 913 aa13.16□□□□□ -0.3
MSI2-208ENST00000579466 C9orf131Q5VYM1 1079 aa13.16□□□□□ -0.3
MSI2-208ENST00000579466 KCPQ6ZWJ8 1503 aa13.16□□□□□ -0.3
MSI2-208ENST00000579466 USP42Q9H9J4 1324 aaKnown RBP13.15□□□□□ -0.3
MSI2-208ENST00000579466 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.3
MSI2-208ENST00000579466 TOMM70O94826 608 aa13.15□□□□□ -0.3
MSI2-208ENST00000579466 APLP1P51693 650 aa13.15□□□□□ -0.3
MSI2-208ENST00000579466 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
MSI2-208ENST00000579466 TIMELESSQ9UNS1 1208 aa13.15□□□□□ -0.3
MSI2-208ENST00000579466 AFDNP55196 1824 aaKnown RBP13.15□□□□□ -0.3
MSI2-208ENST00000579466 SBF1O95248 1867 aa13.14□□□□□ -0.31
MSI2-208ENST00000579466 KCNA3P22001 575 aa13.14□□□□□ -0.31
MSI2-208ENST00000579466 HTRA3P83110 453 aa13.14□□□□□ -0.31
MSI2-208ENST00000579466 DALRD3Q5D0E6 543 aaKnown RBP13.14□□□□□ -0.31
MSI2-208ENST00000579466 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
MSI2-208ENST00000579466 C16orf71Q8IYS4 520 aaPredicted RBP13.14□□□□□ -0.31
MSI2-208ENST00000579466 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
MSI2-208ENST00000579466 USPL1Q5W0Q7 1092 aa13.13□□□□□ -0.31
MSI2-208ENST00000579466 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
MSI2-208ENST00000579466 HMOX1P09601 288 aa13.12□□□□□ -0.31
MSI2-208ENST00000579466 IL13P35225 146 aa13.12□□□□□ -0.31
MSI2-208ENST00000579466 SLC39A6Q13433 755 aa13.12□□□□□ -0.31
MSI2-208ENST00000579466 INTS5Q6P9B9 1019 aaKnown RBP13.12□□□□□ -0.31
MSI2-208ENST00000579466 KNSTRNQ9Y448 316 aa13.12□□□□□ -0.31
MSI2-208ENST00000579466 CCDC88AQ3V6T2 1871 aa13.11□□□□□ -0.31
MSI2-208ENST00000579466 POLRMTO00411 1230 aaKnown RBP13.11□□□□□ -0.31
MSI2-208ENST00000579466 ZPR1O75312 459 aa13.11□□□□□ -0.31
MSI2-208ENST00000579466 RASSF7Q02833 373 aa13.11□□□□□ -0.31
MSI2-208ENST00000579466 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
MSI2-208ENST00000579466 LGR6Q9HBX8 967 aa13.11□□□□□ -0.31
MSI2-208ENST00000579466 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
MSI2-208ENST00000579466 COL15A1P39059 1388 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms