RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 KCPQ6ZWJ8 1503 aa19.63■□□□□ 0.73
CSNK1D-211ENST00000579316 INSRP06213 1382 aa19.63■□□□□ 0.73
CSNK1D-211ENST00000579316 RRS1Q15050 365 aaKnown RBP19.63■□□□□ 0.73
CSNK1D-211ENST00000579316 FCHSD2O94868 740 aa19.62■□□□□ 0.73
CSNK1D-211ENST00000579316 DPEP1P16444 411 aa19.62■□□□□ 0.73
CSNK1D-211ENST00000579316 ITPK1Q13572 414 aa19.62■□□□□ 0.73
CSNK1D-211ENST00000579316 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
CSNK1D-211ENST00000579316 NLGN1Q8N2Q7 840 aa19.61■□□□□ 0.73
CSNK1D-211ENST00000579316 NCAPD2Q15021 1401 aa19.6■□□□□ 0.73
CSNK1D-211ENST00000579316 KIF24Q5T7B8 1368 aa19.6■□□□□ 0.73
CSNK1D-211ENST00000579316 SMC1BQ8NDV3 1235 aa19.6■□□□□ 0.73
CSNK1D-211ENST00000579316 KCNA3P22001 575 aa19.59■□□□□ 0.73
CSNK1D-211ENST00000579316 CARD11Q9BXL7 1154 aa19.59■□□□□ 0.73
CSNK1D-211ENST00000579316 CCDC87Q9NVE4 849 aa19.59■□□□□ 0.73
CSNK1D-211ENST00000579316 FLT4P35916 1363 aa19.58■□□□□ 0.73
CSNK1D-211ENST00000579316 HSPA1AP0DMV8 641 aaKnown RBP19.58■□□□□ 0.72
CSNK1D-211ENST00000579316 HSPA1BP0DMV9 641 aaKnown RBP19.58■□□□□ 0.72
CSNK1D-211ENST00000579316 TMF1P82094 1093 aa19.58■□□□□ 0.72
CSNK1D-211ENST00000579316 HSP90AB2PQ58FF8 381 aa19.58■□□□□ 0.72
CSNK1D-211ENST00000579316 DCAF5Q96JK2 942 aa19.58■□□□□ 0.72
CSNK1D-211ENST00000579316 ZNF831Q5JPB2 1677 aa19.57■□□□□ 0.72
CSNK1D-211ENST00000579316 ADRA2BP18089 450 aa19.57■□□□□ 0.72
CSNK1D-211ENST00000579316 ATP6V1AP38606 617 aa19.57■□□□□ 0.72
CSNK1D-211ENST00000579316 SIN3AQ96ST3 1273 aa19.57■□□□□ 0.72
CSNK1D-211ENST00000579316 RRAGCQ9HB90 399 aa19.57■□□□□ 0.72
CSNK1D-211ENST00000579316 ASAP1Q9ULH1 1129 aa19.57■□□□□ 0.72
CSNK1D-211ENST00000579316 KDRP35968 1356 aa19.57■□□□□ 0.72
CSNK1D-211ENST00000579316 TRAPPC3LQ5T215 181 aa19.56■□□□□ 0.72
CSNK1D-211ENST00000579316 TMOD3Q9NYL9 352 aa19.56■□□□□ 0.72
CSNK1D-211ENST00000579316 FYB1O15117 783 aa19.55■□□□□ 0.72
CSNK1D-211ENST00000579316 SLC34A2O95436 690 aa19.55■□□□□ 0.72
CSNK1D-211ENST00000579316 RNF181Q9P0P0 153 aa19.55■□□□□ 0.72
CSNK1D-211ENST00000579316 PIM2Q9P1W9 311 aa19.55■□□□□ 0.72
CSNK1D-211ENST00000579316 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
CSNK1D-211ENST00000579316 ZC3H4Q9UPT8 1303 aaKnown RBP19.54■□□□□ 0.72
CSNK1D-211ENST00000579316 SBF1O95248 1867 aa19.54■□□□□ 0.72
CSNK1D-211ENST00000579316 GYS1P13807 737 aa19.54■□□□□ 0.72
CSNK1D-211ENST00000579316 DALRD3Q5D0E6 543 aaKnown RBP19.53■□□□□ 0.72
CSNK1D-211ENST00000579316 ATG3Q9NT62 314 aa19.53■□□□□ 0.72
CSNK1D-211ENST00000579316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.72
CSNK1D-211ENST00000579316 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
CSNK1D-211ENST00000579316 RC3H1Q5TC82 1133 aaKnown RBP19.52■□□□□ 0.72
CSNK1D-211ENST00000579316 ARHGEF1Q92888 912 aaKnown RBP19.52■□□□□ 0.72
CSNK1D-211ENST00000579316 TESK2Q96S53 571 aa19.52■□□□□ 0.72
CSNK1D-211ENST00000579316 PARP3Q9Y6F1 533 aa19.52■□□□□ 0.72
CSNK1D-211ENST00000579316 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
CSNK1D-211ENST00000579316 COL5A3P25940 1745 aaPredicted RBP19.51■□□□□ 0.71
CSNK1D-211ENST00000579316 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
CSNK1D-211ENST00000579316 CNTNAP4Q9C0A0 1308 aa19.51■□□□□ 0.71
CSNK1D-211ENST00000579316 TONSLQ96HA7 1378 aa19.5■□□□□ 0.71
CSNK1D-211ENST00000579316 SLC4A9Q96Q91 983 aa19.49■□□□□ 0.71
CSNK1D-211ENST00000579316 NEUROD1Q13562 356 aa19.48■□□□□ 0.71
CSNK1D-211ENST00000579316 RPS6KA4O75676 772 aa19.47■□□□□ 0.71
CSNK1D-211ENST00000579316 PHKG2P15735 406 aa19.47■□□□□ 0.71
CSNK1D-211ENST00000579316 RFC4P35249 363 aa19.47■□□□□ 0.71
CSNK1D-211ENST00000579316 KIF20BQ96Q89 1820 aa19.46■□□□□ 0.71
CSNK1D-211ENST00000579316 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
CSNK1D-211ENST00000579316 VEGFAP15692 232 aaPredicted RBP19.46■□□□□ 0.71
CSNK1D-211ENST00000579316 IFNL2Q8IZJ0 200 aa19.46■□□□□ 0.71
CSNK1D-211ENST00000579316 ANKRD26Q9UPS8 1709 aa19.45■□□□□ 0.7
CSNK1D-211ENST00000579316 MYH14Q7Z406 1995 aaKnown RBP19.45■□□□□ 0.7
CSNK1D-211ENST00000579316 GLTPD2A6NH11 291 aa19.44■□□□□ 0.7
CSNK1D-211ENST00000579316 DDR1Q08345 913 aa19.44■□□□□ 0.7
CSNK1D-211ENST00000579316 EMILIN1Q9Y6C2 1016 aa19.43■□□□□ 0.7
CSNK1D-211ENST00000579316 CHRNA5P30532 468 aa19.42■□□□□ 0.7
CSNK1D-211ENST00000579316 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
CSNK1D-211ENST00000579316 LMNB1P20700 586 aa19.41■□□□□ 0.7
CSNK1D-211ENST00000579316 EYA1Q99502 592 aa19.41■□□□□ 0.7
CSNK1D-211ENST00000579316 USP42Q9H9J4 1324 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-211ENST00000579316 ERVV-2B6SEH9 535 aa19.4■□□□□ 0.7
CSNK1D-211ENST00000579316 RASSF7Q02833 373 aa19.4■□□□□ 0.7
CSNK1D-211ENST00000579316 FKBP8Q14318 412 aa19.4■□□□□ 0.7
CSNK1D-211ENST00000579316 RBM42Q9BTD8 480 aaKnown RBP19.4■□□□□ 0.7
CSNK1D-211ENST00000579316 WASHC2AQ641Q2 1341 aa19.4■□□□□ 0.7
CSNK1D-211ENST00000579316 TIAM2Q8IVF5 1701 aa19.39■□□□□ 0.7
CSNK1D-211ENST00000579316 POLRMTO00411 1230 aaKnown RBP19.38■□□□□ 0.69
CSNK1D-211ENST00000579316 PRDM10Q9NQV6 1147 aa19.38■□□□□ 0.69
CSNK1D-211ENST00000579316 CREBZFQ9NS37 354 aa19.38■□□□□ 0.69
CSNK1D-211ENST00000579316 SRP68Q9UHB9 627 aaKnown RBP19.38■□□□□ 0.69
CSNK1D-211ENST00000579316 ADAMTS7Q9UKP4 1686 aa19.37■□□□□ 0.69
CSNK1D-211ENST00000579316 POTECB2RU33 542 aa19.37■□□□□ 0.69
CSNK1D-211ENST00000579316 TM4SF1P30408 202 aa19.37■□□□□ 0.69
CSNK1D-211ENST00000579316 DLEC1Q9Y238 1755 aa19.37■□□□□ 0.69
CSNK1D-211ENST00000579316 FOXN1O15353 648 aa19.35■□□□□ 0.69
CSNK1D-211ENST00000579316 CRKLP46109 303 aaKnown RBP19.35■□□□□ 0.69
CSNK1D-211ENST00000579316 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
CSNK1D-211ENST00000579316 TJP1Q07157 1748 aa19.33■□□□□ 0.68
CSNK1D-211ENST00000579316 NRXN2Q9P2S2 1712 aa19.33■□□□□ 0.68
CSNK1D-211ENST00000579316 MKRN1Q9UHC7 482 aaKnown RBP19.32■□□□□ 0.68
CSNK1D-211ENST00000579316 CNTNAP1P78357 1384 aa19.32■□□□□ 0.68
CSNK1D-211ENST00000579316 CCDC88AQ3V6T2 1871 aa19.31■□□□□ 0.68
CSNK1D-211ENST00000579316 NFKBIEO00221 500 aa19.31■□□□□ 0.68
CSNK1D-211ENST00000579316 PPM1GO15355 546 aaPredicted RBP19.31■□□□□ 0.68
CSNK1D-211ENST00000579316 CARD14Q9BXL6 1004 aa19.31■□□□□ 0.68
CSNK1D-211ENST00000579316 PCDH10Q9P2E7 1040 aa19.31■□□□□ 0.68
CSNK1D-211ENST00000579316 AFDNP55196 1824 aaKnown RBP19.3■□□□□ 0.68
CSNK1D-211ENST00000579316 CTCFP49711 727 aaPredicted RBP19.3■□□□□ 0.68
CSNK1D-211ENST00000579316 CHADLQ6NUI6 762 aa19.3■□□□□ 0.68
CSNK1D-211ENST00000579316 DPY19L2Q6NUT2 758 aa19.29■□□□□ 0.68
CSNK1D-211ENST00000579316 INTS5Q6P9B9 1019 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms