RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 CEP350Q5VT06 3117 aa11.82□□□□□ -0.52
CASC3-206ENST00000579238 MMP10P09238 476 aa11.81□□□□□ -0.52
CASC3-206ENST00000579238 HSPA6P17066 643 aa11.81□□□□□ -0.52
CASC3-206ENST00000579238 RTCBQ9Y3I0 505 aaKnown RBP11.81□□□□□ -0.52
CASC3-206ENST00000579238 KDRP35968 1356 aa11.8□□□□□ -0.52
CASC3-206ENST00000579238 ERVV-2B6SEH9 535 aa11.8□□□□□ -0.52
CASC3-206ENST00000579238 HSP90AB1P08238 724 aaKnown RBP11.8□□□□□ -0.52
CASC3-206ENST00000579238 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
CASC3-206ENST00000579238 TRAPPC3LQ5T215 181 aa11.8□□□□□ -0.52
CASC3-206ENST00000579238 IFFO2Q5TF58 517 aa11.8□□□□□ -0.52
CASC3-206ENST00000579238 ADRA2BP18089 450 aa11.79□□□□□ -0.52
CASC3-206ENST00000579238 TNNT2P45379 298 aaPredicted RBP11.79□□□□□ -0.52
CASC3-206ENST00000579238 TGFB2P61812 414 aa11.79□□□□□ -0.52
CASC3-206ENST00000579238 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
CASC3-206ENST00000579238 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
CASC3-206ENST00000579238 DCAF5Q96JK2 942 aa11.79□□□□□ -0.52
CASC3-206ENST00000579238 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
CASC3-206ENST00000579238 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
CASC3-206ENST00000579238 KIF3CO14782 793 aa11.78□□□□□ -0.52
CASC3-206ENST00000579238 PLEKHO1Q53GL0 409 aaPredicted RBP11.78□□□□□ -0.52
CASC3-206ENST00000579238 SLC4A9Q96Q91 983 aa11.78□□□□□ -0.52
CASC3-206ENST00000579238 POLR3GLQ9BT43 218 aa11.78□□□□□ -0.52
CASC3-206ENST00000579238 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
CASC3-206ENST00000579238 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
CASC3-206ENST00000579238 AMOTQ4VCS5 1084 aa11.77□□□□□ -0.53
CASC3-206ENST00000579238 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
CASC3-206ENST00000579238 CCDC87Q9NVE4 849 aa11.77□□□□□ -0.53
CASC3-206ENST00000579238 ZNF831Q5JPB2 1677 aa11.77□□□□□ -0.53
CASC3-206ENST00000579238 C10orf71Q711Q0 1435 aa11.77□□□□□ -0.53
CASC3-206ENST00000579238 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
CASC3-206ENST00000579238 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
CASC3-206ENST00000579238 RPS6KA4O75676 772 aa11.76□□□□□ -0.53
CASC3-206ENST00000579238 GYS1P13807 737 aa11.76□□□□□ -0.53
CASC3-206ENST00000579238 RFC4P35249 363 aa11.76□□□□□ -0.53
CASC3-206ENST00000579238 CABP4P57796 275 aa11.76□□□□□ -0.53
CASC3-206ENST00000579238 ZNF530Q6P9A1 599 aaPredicted RBP11.76□□□□□ -0.53
CASC3-206ENST00000579238 BCS1LQ9Y276 419 aa11.76□□□□□ -0.53
CASC3-206ENST00000579238 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
CASC3-206ENST00000579238 CLSPNQ9HAW4 1339 aa11.75□□□□□ -0.53
CASC3-206ENST00000579238 KDM6AO15550 1401 aaPredicted RBP11.75□□□□□ -0.53
CASC3-206ENST00000579238 KIAA1551Q9HCM1 1747 aa11.74□□□□□ -0.53
CASC3-206ENST00000579238 DPEP1P16444 411 aa11.74□□□□□ -0.53
CASC3-206ENST00000579238 MTHFSP49914 203 aa11.74□□□□□ -0.53
CASC3-206ENST00000579238 ARHGAP27Q6ZUM4 889 aa11.74□□□□□ -0.53
CASC3-206ENST00000579238 PANK3Q9H999 370 aa11.74□□□□□ -0.53
CASC3-206ENST00000579238 FCHSD2O94868 740 aa11.73□□□□□ -0.53
CASC3-206ENST00000579238 C4AP0C0L4 1744 aa11.73□□□□□ -0.53
CASC3-206ENST00000579238 COL5A3P25940 1745 aaPredicted RBP11.73□□□□□ -0.53
CASC3-206ENST00000579238 C1orf141Q5JVX7 400 aa11.73□□□□□ -0.53
CASC3-206ENST00000579238 N4BP2Q86UW6 1770 aaPredicted RBP11.73□□□□□ -0.53
CASC3-206ENST00000579238 PTCD1O75127 700 aaKnown RBP11.72□□□□□ -0.53
CASC3-206ENST00000579238 TOMM70O94826 608 aa11.72□□□□□ -0.53
CASC3-206ENST00000579238 CRKLP46109 303 aaKnown RBP11.72□□□□□ -0.53
CASC3-206ENST00000579238 APLP1P51693 650 aa11.72□□□□□ -0.53
CASC3-206ENST00000579238 EIF4G2P78344 907 aaKnown RBP eCLIP11.72□□□□□ -0.53
CASC3-206ENST00000579238 AEBP1Q8IUX7 1158 aa11.72□□□□□ -0.53
CASC3-206ENST00000579238 MYH14Q7Z406 1995 aaKnown RBP11.71□□□□□ -0.53
CASC3-206ENST00000579238 KCNA3P22001 575 aa11.71□□□□□ -0.53
CASC3-206ENST00000579238 MORC1Q86VD1 984 aa11.71□□□□□ -0.53
CASC3-206ENST00000579238 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
CASC3-206ENST00000579238 PIM2Q9P1W9 311 aa11.71□□□□□ -0.53
CASC3-206ENST00000579238 USP42Q9H9J4 1324 aaKnown RBP11.7□□□□□ -0.54
CASC3-206ENST00000579238 HSPA5P11021 654 aaKnown RBP11.7□□□□□ -0.54
CASC3-206ENST00000579238 FKBP8Q14318 412 aa11.7□□□□□ -0.54
CASC3-206ENST00000579238 SULT6B1Q6IMI4 303 aa11.7□□□□□ -0.54
CASC3-206ENST00000579238 SRP68Q9UHB9 627 aaKnown RBP11.7□□□□□ -0.54
CASC3-206ENST00000579238 DALRD3Q5D0E6 543 aaKnown RBP11.69□□□□□ -0.54
CASC3-206ENST00000579238 C9orf131Q5VYM1 1079 aa11.69□□□□□ -0.54
CASC3-206ENST00000579238 NMRK2Q9NPI5 230 aa11.69□□□□□ -0.54
CASC3-206ENST00000579238 BRCA1P38398 1863 aaKnown RBP11.69□□□□□ -0.54
CASC3-206ENST00000579238 IL13P35225 146 aa11.68□□□□□ -0.54
CASC3-206ENST00000579238 DDR1Q08345 913 aa11.68□□□□□ -0.54
CASC3-206ENST00000579238 AKAP4Q5JQC9 854 aa11.68□□□□□ -0.54
CASC3-206ENST00000579238 INTS5Q6P9B9 1019 aaKnown RBP11.68□□□□□ -0.54
CASC3-206ENST00000579238 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
CASC3-206ENST00000579238 TM4SF1P30408 202 aa11.67□□□□□ -0.54
CASC3-206ENST00000579238 DNAJC5GQ8N7S2 189 aa11.67□□□□□ -0.54
CASC3-206ENST00000579238 RBM46Q8TBY0 533 aaKnown RBP11.67□□□□□ -0.54
CASC3-206ENST00000579238 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
CASC3-206ENST00000579238 KNSTRNQ9Y448 316 aa11.67□□□□□ -0.54
CASC3-206ENST00000579238 ARFGEF1Q9Y6D6 1849 aa11.67□□□□□ -0.54
CASC3-206ENST00000579238 TJP1Q07157 1748 aa11.66□□□□□ -0.54
CASC3-206ENST00000579238 ZPR1O75312 459 aa11.66□□□□□ -0.54
CASC3-206ENST00000579238 DNAJC10Q8IXB1 793 aa11.66□□□□□ -0.54
CASC3-206ENST00000579238 C16orf71Q8IYS4 520 aaPredicted RBP11.66□□□□□ -0.54
CASC3-206ENST00000579238 SLC52A2Q9HAB3 445 aa11.66□□□□□ -0.54
CASC3-206ENST00000579238 SOS1Q07889 1333 aaPredicted RBP11.65□□□□□ -0.54
CASC3-206ENST00000579238 KDM2BQ8NHM5 1336 aa11.65□□□□□ -0.54
CASC3-206ENST00000579238 SCN11AQ9UI33 1791 aa11.65□□□□□ -0.54
CASC3-206ENST00000579238 CHRNA5P30532 468 aa11.65□□□□□ -0.54
CASC3-206ENST00000579238 FSTL1Q12841 308 aa11.65□□□□□ -0.54
CASC3-206ENST00000579238 RNF181Q9P0P0 153 aa11.65□□□□□ -0.54
CASC3-206ENST00000579238 RNMTO43148 476 aaKnown RBP11.64□□□□□ -0.55
CASC3-206ENST00000579238 CYP19A1P11511 503 aaPredicted RBP11.64□□□□□ -0.55
CASC3-206ENST00000579238 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
CASC3-206ENST00000579238 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
CASC3-206ENST00000579238 LGR6Q9HBX8 967 aa11.64□□□□□ -0.55
CASC3-206ENST00000579238 ADAMTS7Q9UKP4 1686 aa11.64□□□□□ -0.55
CASC3-206ENST00000579238 MRC1P22897 1456 aa11.63□□□□□ -0.55
CASC3-206ENST00000579238 SLC39A6Q13433 755 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms