RNA–Protein interactions for RNA: ENST00000579128.1

TYMS-204, Transcript of thymidylate synthetase, humanhuman

TSL 2

Gene TYMS, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-204ENST00000579128 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
TYMS-204ENST00000579128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.11■□□□□ 0.33
TYMS-204ENST00000579128 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
TYMS-204ENST00000579128 TAF1LQ8IZX4 1826 aa17.11■□□□□ 0.33
TYMS-204ENST00000579128 RC3H1Q5TC82 1133 aaKnown RBP17.1■□□□□ 0.33
TYMS-204ENST00000579128 RTCBQ9Y3I0 505 aaKnown RBP17.1■□□□□ 0.33
TYMS-204ENST00000579128 C4BP0C0L5 1744 aa17.1■□□□□ 0.33
TYMS-204ENST00000579128 GNPATO15228 680 aa17.09■□□□□ 0.33
TYMS-204ENST00000579128 ADRA2BP18089 450 aa17.09■□□□□ 0.33
TYMS-204ENST00000579128 GPR162Q16538 588 aa17.09■□□□□ 0.33
TYMS-204ENST00000579128 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
TYMS-204ENST00000579128 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
TYMS-204ENST00000579128 TUBGCP6Q96RT7 1819 aa17.08■□□□□ 0.33
TYMS-204ENST00000579128 COL24A1Q17RW2 1714 aa17.08■□□□□ 0.32
TYMS-204ENST00000579128 PHF14O94880 888 aa17.08■□□□□ 0.32
TYMS-204ENST00000579128 HMOX1P09601 288 aa17.08■□□□□ 0.32
TYMS-204ENST00000579128 TRAPPC3LQ5T215 181 aa17.08■□□□□ 0.32
TYMS-204ENST00000579128 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
TYMS-204ENST00000579128 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.32
TYMS-204ENST00000579128 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
TYMS-204ENST00000579128 ITPK1Q13572 414 aa17.07■□□□□ 0.32
TYMS-204ENST00000579128 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
TYMS-204ENST00000579128 CNTNAP4Q9C0A0 1308 aa17.06■□□□□ 0.32
TYMS-204ENST00000579128 GRIN3BO60391 1043 aa17.06■□□□□ 0.32
TYMS-204ENST00000579128 CNGB1Q14028 1251 aaPredicted RBP17.06■□□□□ 0.32
TYMS-204ENST00000579128 MSL1Q68DK7 614 aa17.06■□□□□ 0.32
TYMS-204ENST00000579128 GAS2L2Q8NHY3 880 aa17.06■□□□□ 0.32
TYMS-204ENST00000579128 ZNF831Q5JPB2 1677 aa17.05■□□□□ 0.32
TYMS-204ENST00000579128 NLGN1Q8N2Q7 840 aa17.05■□□□□ 0.32
TYMS-204ENST00000579128 SLC52A2Q9HAB3 445 aa17.05■□□□□ 0.32
TYMS-204ENST00000579128 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
TYMS-204ENST00000579128 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
TYMS-204ENST00000579128 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
TYMS-204ENST00000579128 RPS6KA4O75676 772 aa17.03■□□□□ 0.32
TYMS-204ENST00000579128 RFC4P35249 363 aa17.03■□□□□ 0.32
TYMS-204ENST00000579128 MTHFSDQ2M296 383 aaKnown RBP17.03■□□□□ 0.32
TYMS-204ENST00000579128 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
TYMS-204ENST00000579128 GNAT3A8MTJ3 354 aa17.01■□□□□ 0.31
TYMS-204ENST00000579128 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
TYMS-204ENST00000579128 NEFMP07197 916 aa17■□□□□ 0.31
TYMS-204ENST00000579128 TEFQ10587 303 aa17■□□□□ 0.31
TYMS-204ENST00000579128 TTC5Q8N0Z6 440 aa17■□□□□ 0.31
TYMS-204ENST00000579128 SLC4A9Q96Q91 983 aa17■□□□□ 0.31
TYMS-204ENST00000579128 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
TYMS-204ENST00000579128 NLGN2Q8NFZ4 835 aa16.99■□□□□ 0.31
TYMS-204ENST00000579128 ARHGEF1Q92888 912 aaKnown RBP16.99■□□□□ 0.31
TYMS-204ENST00000579128 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
TYMS-204ENST00000579128 CHD4Q14839 1912 aa16.99■□□□□ 0.31
TYMS-204ENST00000579128 PPP2R1AP30153 589 aa16.98■□□□□ 0.31
TYMS-204ENST00000579128 CRKLP46109 303 aaKnown RBP16.98■□□□□ 0.31
TYMS-204ENST00000579128 AMIGO3Q86WK7 504 aa16.98■□□□□ 0.31
TYMS-204ENST00000579128 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
TYMS-204ENST00000579128 FCHSD2O94868 740 aa16.97■□□□□ 0.31
TYMS-204ENST00000579128 MMP10P09238 476 aa16.97■□□□□ 0.31
TYMS-204ENST00000579128 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
TYMS-204ENST00000579128 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
TYMS-204ENST00000579128 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
TYMS-204ENST00000579128 COL3A1P02461 1466 aaPredicted RBP16.97■□□□□ 0.31
TYMS-204ENST00000579128 STARD3NLO95772 234 aa16.96■□□□□ 0.31
TYMS-204ENST00000579128 PARP3Q9Y6F1 533 aa16.96■□□□□ 0.31
TYMS-204ENST00000579128 MRC1P22897 1456 aa16.96■□□□□ 0.31
TYMS-204ENST00000579128 ZPR1O75312 459 aa16.95■□□□□ 0.3
TYMS-204ENST00000579128 PRKAR2BP31323 418 aa16.95■□□□□ 0.3
TYMS-204ENST00000579128 TGFB2P61812 414 aa16.95■□□□□ 0.3
TYMS-204ENST00000579128 RTF1Q92541 710 aaKnown RBP16.95■□□□□ 0.3
TYMS-204ENST00000579128 PNNQ9H307 717 aaKnown RBP16.95■□□□□ 0.3
TYMS-204ENST00000579128 CCDC87Q9NVE4 849 aa16.95■□□□□ 0.3
TYMS-204ENST00000579128 COL5A3P25940 1745 aaPredicted RBP16.94■□□□□ 0.3
TYMS-204ENST00000579128 GYS1P13807 737 aa16.94■□□□□ 0.3
TYMS-204ENST00000579128 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
TYMS-204ENST00000579128 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
TYMS-204ENST00000579128 SLC39A6Q13433 755 aa16.93■□□□□ 0.3
TYMS-204ENST00000579128 DNAJC10Q8IXB1 793 aa16.93■□□□□ 0.3
TYMS-204ENST00000579128 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
TYMS-204ENST00000579128 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
TYMS-204ENST00000579128 INTS5Q6P9B9 1019 aaKnown RBP16.92■□□□□ 0.3
TYMS-204ENST00000579128 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
TYMS-204ENST00000579128 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
TYMS-204ENST00000579128 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
TYMS-204ENST00000579128 A0A087WZG4 1122 aa16.91■□□□□ 0.3
TYMS-204ENST00000579128 CYP19A1P11511 503 aaPredicted RBP16.91■□□□□ 0.3
TYMS-204ENST00000579128 MYH14Q7Z406 1995 aaKnown RBP16.91■□□□□ 0.3
TYMS-204ENST00000579128 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
TYMS-204ENST00000579128 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
TYMS-204ENST00000579128 YBX3P16989 372 aaKnown RBP eCLIP16.9■□□□□ 0.37e-8■■□□□ 14.1
TYMS-204ENST00000579128 C1QTNF8P60827 252 aa16.9■□□□□ 0.3
TYMS-204ENST00000579128 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
TYMS-204ENST00000579128 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
TYMS-204ENST00000579128 RALBP1Q15311 655 aa16.89■□□□□ 0.29
TYMS-204ENST00000579128 IFFO2Q5TF58 517 aa16.89■□□□□ 0.29
TYMS-204ENST00000579128 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
TYMS-204ENST00000579128 UTRNP46939 3433 aa16.89■□□□□ 0.29
TYMS-204ENST00000579128 CEMIPQ8WUJ3 1361 aa16.89■□□□□ 0.29
TYMS-204ENST00000579128 SENP3-EIF4A1A0A087X0R7 540 aa16.88■□□□□ 0.29
TYMS-204ENST00000579128 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
TYMS-204ENST00000579128 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
TYMS-204ENST00000579128 SOS1Q07889 1333 aaPredicted RBP16.88■□□□□ 0.29
TYMS-204ENST00000579128 HEG1Q9ULI3 1381 aa16.87■□□□□ 0.29
TYMS-204ENST00000579128 ZNF496Q96IT1 587 aaPredicted RBP16.86■□□□□ 0.29
TYMS-204ENST00000579128 TJP1Q07157 1748 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms