RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
BRIP1-204ENST00000579028 HSP90AB2PQ58FF8 381 aa12.25□□□□□ -0.45
BRIP1-204ENST00000579028 GGNBP2Q9H3C7 697 aa12.25□□□□□ -0.45
BRIP1-204ENST00000579028 FLT4P35916 1363 aa12.25□□□□□ -0.45
BRIP1-204ENST00000579028 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
BRIP1-204ENST00000579028 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
BRIP1-204ENST00000579028 TGFB2P61812 414 aa12.24□□□□□ -0.45
BRIP1-204ENST00000579028 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
BRIP1-204ENST00000579028 C10orf71Q711Q0 1435 aa12.23□□□□□ -0.45
BRIP1-204ENST00000579028 GNPATO15228 680 aa12.23□□□□□ -0.45
BRIP1-204ENST00000579028 MMP10P09238 476 aa12.23□□□□□ -0.45
BRIP1-204ENST00000579028 ITPK1Q13572 414 aa12.23□□□□□ -0.45
BRIP1-204ENST00000579028 NMRK2Q9NPI5 230 aa12.23□□□□□ -0.45
BRIP1-204ENST00000579028 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
BRIP1-204ENST00000579028 ST20-MTHFSA0A0A6YYL1 179 aa12.22□□□□□ -0.45
BRIP1-204ENST00000579028 RBM46Q8TBY0 533 aaKnown RBP12.22□□□□□ -0.45
BRIP1-204ENST00000579028 BCS1LQ9Y276 419 aa12.22□□□□□ -0.45
BRIP1-204ENST00000579028 BRCA1P38398 1863 aaKnown RBP12.22□□□□□ -0.45
BRIP1-204ENST00000579028 JMYQ8N9B5 988 aa12.21□□□□□ -0.45
BRIP1-204ENST00000579028 KLRG1Q96E93 195 aa12.21□□□□□ -0.45
BRIP1-204ENST00000579028 TMOD3Q9NYL9 352 aa12.21□□□□□ -0.45
BRIP1-204ENST00000579028 SPG7Q9UQ90 795 aa12.21□□□□□ -0.45
BRIP1-204ENST00000579028 PLEKHG2Q9H7P9 1386 aa12.2□□□□□ -0.46
BRIP1-204ENST00000579028 A0A0G2JLW4 131 aa12.2□□□□□ -0.46
BRIP1-204ENST00000579028 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
BRIP1-204ENST00000579028 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
BRIP1-204ENST00000579028 NLGN1Q8N2Q7 840 aa12.2□□□□□ -0.46
BRIP1-204ENST00000579028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■■■■□ 20.1
BRIP1-204ENST00000579028 ASAP1Q9ULH1 1129 aa12.2□□□□□ -0.46
BRIP1-204ENST00000579028 ARFGEF1Q9Y6D6 1849 aa12.2□□□□□ -0.46
BRIP1-204ENST00000579028 C4AP0C0L4 1744 aa12.2□□□□□ -0.46
BRIP1-204ENST00000579028 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
BRIP1-204ENST00000579028 KDRP35968 1356 aa12.19□□□□□ -0.46
BRIP1-204ENST00000579028 TONSLQ96HA7 1378 aa12.19□□□□□ -0.46
BRIP1-204ENST00000579028 FSTL1Q12841 308 aa12.19□□□□□ -0.46
BRIP1-204ENST00000579028 COL13A1Q5TAT6 717 aaPredicted RBP12.19□□□□□ -0.46
BRIP1-204ENST00000579028 ANKRD26Q9UPS8 1709 aa12.19□□□□□ -0.46
BRIP1-204ENST00000579028 FCHSD2O94868 740 aa12.18□□□□□ -0.46
BRIP1-204ENST00000579028 DPEP1P16444 411 aa12.18□□□□□ -0.46
BRIP1-204ENST00000579028 TMF1P82094 1093 aa12.18□□□□□ -0.46
BRIP1-204ENST00000579028 ATG3Q9NT62 314 aa12.18□□□□□ -0.46
BRIP1-204ENST00000579028 CCDC87Q9NVE4 849 aa12.18□□□□□ -0.46
BRIP1-204ENST00000579028 RTCBQ9Y3I0 505 aaKnown RBP12.18□□□□□ -0.46
BRIP1-204ENST00000579028 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
BRIP1-204ENST00000579028 PHKG2P15735 406 aa12.17□□□□□ -0.46
BRIP1-204ENST00000579028 TRAPPC3LQ5T215 181 aa12.17□□□□□ -0.46
BRIP1-204ENST00000579028 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
BRIP1-204ENST00000579028 C16orf71Q8IYS4 520 aaPredicted RBP12.17□□□□□ -0.46
BRIP1-204ENST00000579028 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
BRIP1-204ENST00000579028 GYS1P13807 737 aa12.16□□□□□ -0.46
BRIP1-204ENST00000579028 KCNA3P22001 575 aa12.16□□□□□ -0.46
BRIP1-204ENST00000579028 HTRA3P83110 453 aa12.16□□□□□ -0.46
BRIP1-204ENST00000579028 RC3H1Q5TC82 1133 aaKnown RBP12.16□□□□□ -0.46
BRIP1-204ENST00000579028 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
BRIP1-204ENST00000579028 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
BRIP1-204ENST00000579028 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
BRIP1-204ENST00000579028 TNRC6CQ9HCJ0 1690 aaKnown RBP12.16□□□□□ -0.46
BRIP1-204ENST00000579028 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
BRIP1-204ENST00000579028 KDM2BQ8NHM5 1336 aa12.15□□□□□ -0.46
BRIP1-204ENST00000579028 CNTNAP4Q9C0A0 1308 aa12.15□□□□□ -0.46
BRIP1-204ENST00000579028 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
BRIP1-204ENST00000579028 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
BRIP1-204ENST00000579028 EYA1Q99502 592 aa12.15□□□□□ -0.46
BRIP1-204ENST00000579028 PARP3Q9Y6F1 533 aa12.15□□□□□ -0.46
BRIP1-204ENST00000579028 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
BRIP1-204ENST00000579028 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
BRIP1-204ENST00000579028 PIM2Q9P1W9 311 aa12.14□□□□□ -0.47
BRIP1-204ENST00000579028 RFC4P35249 363 aa12.13□□□□□ -0.47
BRIP1-204ENST00000579028 PRELPP51888 382 aa12.13□□□□□ -0.47
BRIP1-204ENST00000579028 TNS4Q8IZW8 715 aa12.13□□□□□ -0.47
BRIP1-204ENST00000579028 SBF1O95248 1867 aa12.12□□□□□ -0.47
BRIP1-204ENST00000579028 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
BRIP1-204ENST00000579028 ERVV-2B6SEH9 535 aa12.12□□□□□ -0.47
BRIP1-204ENST00000579028 DALRD3Q5D0E6 543 aaKnown RBP12.12□□□□□ -0.47
BRIP1-204ENST00000579028 RBM42Q9BTD8 480 aaKnown RBP12.12□□□□□ -0.47
BRIP1-204ENST00000579028 CARD14Q9BXL6 1004 aa12.12□□□□□ -0.47
BRIP1-204ENST00000579028 RRAGCQ9HB90 399 aa12.12□□□□□ -0.47
BRIP1-204ENST00000579028 RNF181Q9P0P0 153 aa12.12□□□□□ -0.47
BRIP1-204ENST00000579028 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
BRIP1-204ENST00000579028 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
BRIP1-204ENST00000579028 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
BRIP1-204ENST00000579028 CDCA8Q53HL2 280 aa12.11□□□□□ -0.47
BRIP1-204ENST00000579028 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
BRIP1-204ENST00000579028 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
BRIP1-204ENST00000579028 HSP90AB1P08238 724 aaKnown RBP12.09□□□□□ -0.47
BRIP1-204ENST00000579028 DDR1Q08345 913 aa12.09□□□□□ -0.47
BRIP1-204ENST00000579028 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
BRIP1-204ENST00000579028 KDM6AO15550 1401 aaPredicted RBP12.09□□□□□ -0.47
BRIP1-204ENST00000579028 USP42Q9H9J4 1324 aaKnown RBP12.09□□□□□ -0.47
BRIP1-204ENST00000579028 EIF4A2Q14240 407 aaKnown RBP12.08□□□□□ -0.48
BRIP1-204ENST00000579028 FKBP8Q14318 412 aa12.08□□□□□ -0.48
BRIP1-204ENST00000579028 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
BRIP1-204ENST00000579028 ADAMTS7Q9UKP4 1686 aa12.07□□□□□ -0.48
BRIP1-204ENST00000579028 HSPA1AP0DMV8 641 aaKnown RBP12.07□□□□□ -0.48
BRIP1-204ENST00000579028 HSPA1BP0DMV9 641 aaKnown RBP12.07□□□□□ -0.48
BRIP1-204ENST00000579028 CHRNA5P30532 468 aa12.07□□□□□ -0.48
BRIP1-204ENST00000579028 CRKLP46109 303 aaKnown RBP12.07□□□□□ -0.48
BRIP1-204ENST00000579028 TJP1Q07157 1748 aa12.06□□□□□ -0.48
BRIP1-204ENST00000579028 POLRMTO00411 1230 aaKnown RBP12.06□□□□□ -0.48
BRIP1-204ENST00000579028 ABCB7O75027 752 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 187.1 ms