RNA–Protein interactions for RNA: ENST00000578574.1

SLC16A3-205, Transcript of solute carrier family 16 member 3, human

TSL 2

Gene SLC16A3, Length 958 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC16A3-205	ENST00000578574	MSH5	O43196	834 aa		32.3	■■■□□ 2.76
SLC16A3-205	ENST00000578574	AK7	Q96M32	723 aa		32.3	■■■□□ 2.76
SLC16A3-205	ENST00000578574	VIRMA	Q69YN4	1812 aa	Known RBP	32.29	■■■□□ 2.76
SLC16A3-205	ENST00000578574	DIAPH1	O60610	1272 aa	Known RBP	32.28	■■■□□ 2.76
SLC16A3-205	ENST00000578574	LINC00116	Q8NCU8	138 aa		32.28	■■■□□ 2.76
SLC16A3-205	ENST00000578574	COL5A3	P25940	1745 aa	Predicted RBP	32.28	■■■□□ 2.76
SLC16A3-205	ENST00000578574	ATP6V1A	P38606	617 aa		32.26	■■■□□ 2.75
SLC16A3-205	ENST00000578574	ITPK1	Q13572	414 aa		32.26	■■■□□ 2.75
SLC16A3-205	ENST00000578574	CABP4	P57796	275 aa		32.25	■■■□□ 2.75
SLC16A3-205	ENST00000578574	AMIGO3	Q86WK7	504 aa		32.25	■■■□□ 2.75
SLC16A3-205	ENST00000578574	HMOX1	P09601	288 aa		32.23	■■■□□ 2.75
SLC16A3-205	ENST00000578574	SSFA2	P28290	1259 aa		32.23	■■■□□ 2.75
SLC16A3-205	ENST00000578574	AKAP4	Q5JQC9	854 aa		32.22	■■■□□ 2.75
SLC16A3-205	ENST00000578574	CIC	Q96RK0	1608 aa	Predicted RBP	32.22	■■■□□ 2.75
SLC16A3-205	ENST00000578574	ADAMTS7	Q9UKP4	1686 aa		32.21	■■■□□ 2.75
SLC16A3-205	ENST00000578574	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.21	■■■□□ 2.75
SLC16A3-205	ENST00000578574	CNGB1	Q14028	1251 aa	Predicted RBP	32.21	■■■□□ 2.75
SLC16A3-205	ENST00000578574	MSL1	Q68DK7	614 aa		32.2	■■■□□ 2.75
SLC16A3-205	ENST00000578574	SLC4A9	Q96Q91	983 aa		32.2	■■■□□ 2.75
SLC16A3-205	ENST00000578574	MRC1	P22897	1456 aa		32.19	■■■□□ 2.74
SLC16A3-205	ENST00000578574	PHF14	O94880	888 aa		32.18	■■■□□ 2.74
SLC16A3-205	ENST00000578574	YY1	P25490	414 aa		32.18	■■■□□ 2.74
SLC16A3-205	ENST00000578574	KLHL34	Q8N239	644 aa		32.18	■■■□□ 2.74
SLC16A3-205	ENST00000578574	GNPAT	O15228	680 aa		32.17	■■■□□ 2.74
SLC16A3-205	ENST00000578574	NFATC2IP	Q8NCF5	419 aa		32.17	■■■□□ 2.74
SLC16A3-205	ENST00000578574	RBM42	Q9BTD8	480 aa	Known RBP	32.17	■■■□□ 2.74
SLC16A3-205	ENST00000578574	CHD4	Q14839	1912 aa		32.16	■■■□□ 2.74
SLC16A3-205	ENST00000578574	TJP1	Q07157	1748 aa		32.15	■■■□□ 2.74
SLC16A3-205	ENST00000578574	SMIM5	Q71RC9	77 aa		32.15	■■■□□ 2.74
SLC16A3-205	ENST00000578574	UTRN	P46939	3433 aa		32.15	■■■□□ 2.74
SLC16A3-205	ENST00000578574	MYH14	Q7Z406	1995 aa	Known RBP	32.14	■■■□□ 2.74
SLC16A3-205	ENST00000578574	MTHFSD	Q2M296	383 aa	Known RBP	32.13	■■■□□ 2.73
SLC16A3-205	ENST00000578574	CNTNAP4	Q9C0A0	1308 aa		32.12	■■■□□ 2.73
SLC16A3-205	ENST00000578574	RC3H1	Q5TC82	1133 aa	Known RBP	32.12	■■■□□ 2.73
SLC16A3-205	ENST00000578574	NLGN2	Q8NFZ4	835 aa		32.11	■■■□□ 2.73
SLC16A3-205	ENST00000578574	SLC52A2	Q9HAB3	445 aa		32.11	■■■□□ 2.73
SLC16A3-205	ENST00000578574	U2SURP	O15042	1029 aa	Known RBP	32.1	■■■□□ 2.73
SLC16A3-205	ENST00000578574	LGR6	Q9HBX8	967 aa		32.1	■■■□□ 2.73
SLC16A3-205	ENST00000578574	C4A	P0C0L4	1744 aa		32.09	■■■□□ 2.73
SLC16A3-205	ENST00000578574	RNMT	O43148	476 aa	Known RBP	32.09	■■■□□ 2.73
SLC16A3-205	ENST00000578574	PTCD1	O75127	700 aa	Known RBP	32.09	■■■□□ 2.73
SLC16A3-205	ENST00000578574	RTCB	Q9Y3I0	505 aa	Known RBP	32.09	■■■□□ 2.73
SLC16A3-205	ENST00000578574	CFAP53	Q96M91	514 aa		32.08	■■■□□ 2.73
SLC16A3-205	ENST00000578574	CD2AP	Q9Y5K6	639 aa		32.07	■■■□□ 2.72
SLC16A3-205	ENST00000578574	ADRA2B	P18089	450 aa		32.06	■■■□□ 2.72
SLC16A3-205	ENST00000578574	UBR2	Q8IWV8	1755 aa		32.05	■■■□□ 2.72
SLC16A3-205	ENST00000578574	PPP2R1A	P30153	589 aa		32.05	■■■□□ 2.72
SLC16A3-205	ENST00000578574	GPR162	Q16538	588 aa		32.05	■■■□□ 2.72
SLC16A3-205	ENST00000578574	TRAPPC3L	Q5T215	181 aa		32.04	■■■□□ 2.72
SLC16A3-205	ENST00000578574	RPS6KA4	O75676	772 aa		32.03	■■■□□ 2.72
SLC16A3-205	ENST00000578574	KCP	Q6ZWJ8	1503 aa		32.03	■■■□□ 2.72
SLC16A3-205	ENST00000578574	SIPA1L3	O60292	1781 aa	Predicted RBP	32.03	■■■□□ 2.72
SLC16A3-205	ENST00000578574	GOLGB1	Q14789	3259 aa	Known RBP	32.02	■■■□□ 2.72
SLC16A3-205	ENST00000578574	GAS2L2	Q8NHY3	880 aa		32.01	■■■□□ 2.71
SLC16A3-205	ENST00000578574	CRKL	P46109	303 aa	Known RBP	32	■■■□□ 2.71
SLC16A3-205	ENST00000578574	ARHGEF1	Q92888	912 aa	Known RBP	32	■■■□□ 2.71
SLC16A3-205	ENST00000578574	KIF13B	Q9NQT8	1826 aa		31.98	■■■□□ 2.71
SLC16A3-205	ENST00000578574	RSPH6A	Q9H0K4	717 aa		31.98	■■■□□ 2.71
SLC16A3-205	ENST00000578574	NUDC	Q9Y266	331 aa		31.98	■■■□□ 2.71
SLC16A3-205	ENST00000578574	GNAT3	A8MTJ3	354 aa		31.97	■■■□□ 2.71
SLC16A3-205	ENST00000578574	PELP1	Q8IZL8	1130 aa	Known RBP	31.97	■■■□□ 2.71
SLC16A3-205	ENST00000578574	SLC39A6	Q13433	755 aa		31.96	■■■□□ 2.71
SLC16A3-205	ENST00000578574	NLGN1	Q8N2Q7	840 aa		31.96	■■■□□ 2.71
SLC16A3-205	ENST00000578574	PRKAR2B	P31323	418 aa		31.95	■■■□□ 2.71
SLC16A3-205	ENST00000578574	RFC4	P35249	363 aa		31.95	■■■□□ 2.71
SLC16A3-205	ENST00000578574	MMP10	P09238	476 aa		31.94	■■■□□ 2.7
SLC16A3-205	ENST00000578574	YBX3	P16989	372 aa	Known RBP eCLIP	31.94	■■■□□ 2.7
SLC16A3-205	ENST00000578574	DNAJC10	Q8IXB1	793 aa		31.94	■■■□□ 2.7
SLC16A3-205	ENST00000578574	GYS1	P13807	737 aa		31.93	■■■□□ 2.7
SLC16A3-205	ENST00000578574	INTS5	Q6P9B9	1019 aa	Known RBP	31.93	■■■□□ 2.7
SLC16A3-205	ENST00000578574	IL17RE	Q8NFR9	667 aa		31.93	■■■□□ 2.7
SLC16A3-205	ENST00000578574	PHACTR3	Q96KR7	559 aa		31.93	■■■□□ 2.7
SLC16A3-205	ENST00000578574	VSIG10	Q8N0Z9	540 aa		31.91	■■■□□ 2.7
SLC16A3-205	ENST00000578574	KIAA1551	Q9HCM1	1747 aa		31.91	■■■□□ 2.7
SLC16A3-205	ENST00000578574	CEMIP	Q8WUJ3	1361 aa		31.91	■■■□□ 2.7
SLC16A3-205	ENST00000578574	GRIN3B	O60391	1043 aa		31.9	■■■□□ 2.7
SLC16A3-205	ENST00000578574	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.9	■■■□□ 2.7
SLC16A3-205	ENST00000578574	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.9	■■■□□ 2.7
SLC16A3-205	ENST00000578574	TEF	Q10587	303 aa		31.9	■■■□□ 2.7
SLC16A3-205	ENST00000578574	CCDC87	Q9NVE4	849 aa		31.9	■■■□□ 2.7
SLC16A3-205	ENST00000578574	FCHSD2	O94868	740 aa		31.89	■■■□□ 2.7
SLC16A3-205	ENST00000578574	CYP19A1	P11511	503 aa	Predicted RBP	31.89	■■■□□ 2.7
SLC16A3-205	ENST00000578574	USP42	Q9H9J4	1324 aa	Known RBP	31.88	■■■□□ 2.69
SLC16A3-205	ENST00000578574	C10orf71	Q711Q0	1435 aa		31.87	■■■□□ 2.69
SLC16A3-205	ENST00000578574	SOS1	Q07889	1333 aa	Predicted RBP	31.86	■■■□□ 2.69
SLC16A3-205	ENST00000578574	TTC5	Q8N0Z6	440 aa		31.86	■■■□□ 2.69
SLC16A3-205	ENST00000578574	ZNF784	Q8NCA9	323 aa	Predicted RBP	31.86	■■■□□ 2.69
SLC16A3-205	ENST00000578574	ZNF790	Q6PG37	636 aa		31.84	■■■□□ 2.69
SLC16A3-205	ENST00000578574	SRP68	Q9UHB9	627 aa	Known RBP	31.84	■■■□□ 2.69
SLC16A3-205	ENST00000578574	N4BP2	Q86UW6	1770 aa	Predicted RBP	31.84	■■■□□ 2.69
SLC16A3-205	ENST00000578574	PXDNL	A1KZ92	1463 aa		31.83	■■■□□ 2.69
SLC16A3-205	ENST00000578574	HEG1	Q9ULI3	1381 aa		31.81	■■■□□ 2.68
SLC16A3-205	ENST00000578574	ZNF496	Q96IT1	587 aa	Predicted RBP	31.81	■■■□□ 2.68
SLC16A3-205	ENST00000578574	ZBTB1	Q9Y2K1	713 aa		31.81	■■■□□ 2.68
SLC16A3-205	ENST00000578574	PARP3	Q9Y6F1	533 aa		31.81	■■■□□ 2.68
SLC16A3-205	ENST00000578574	COL15A1	P39059	1388 aa		31.81	■■■□□ 2.68
SLC16A3-205	ENST00000578574	BRCA1	P38398	1863 aa	Known RBP	31.79	■■■□□ 2.68
SLC16A3-205	ENST00000578574	FKBP8	Q14318	412 aa		31.79	■■■□□ 2.68
SLC16A3-205	ENST00000578574	DLG5	Q8TDM6	1919 aa		31.79	■■■□□ 2.68
SLC16A3-205	ENST00000578574	TGFB2	P61812	414 aa		31.78	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms