RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 LOC102724428A0A0B4J2F2 783 aa18.95■□□□□ 0.62
PSMD11-207ENST00000578397 ABCB7O75027 752 aa18.95■□□□□ 0.62
PSMD11-207ENST00000578397 YY1P25490 414 aa18.95■□□□□ 0.62
PSMD11-207ENST00000578397 IL13P35225 146 aa18.95■□□□□ 0.62
PSMD11-207ENST00000578397 SIK1P57059 783 aa18.95■□□□□ 0.62
PSMD11-207ENST00000578397 SULT6B1Q6IMI4 303 aa18.94■□□□□ 0.62
PSMD11-207ENST00000578397 ZNF530Q6P9A1 599 aaPredicted RBP18.94■□□□□ 0.62
PSMD11-207ENST00000578397 AK7Q96M32 723 aa18.94■□□□□ 0.62
PSMD11-207ENST00000578397 ASAP1Q9ULH1 1129 aa18.94■□□□□ 0.62
PSMD11-207ENST00000578397 AEBP1Q8IUX7 1158 aa18.93■□□□□ 0.62
PSMD11-207ENST00000578397 ITGB4P16144 1822 aa18.93■□□□□ 0.62
PSMD11-207ENST00000578397 KDRP35968 1356 aa18.93■□□□□ 0.62
PSMD11-207ENST00000578397 MTHFSP49914 203 aa18.92■□□□□ 0.62
PSMD11-207ENST00000578397 C1orf141Q5JVX7 400 aa18.92■□□□□ 0.62
PSMD11-207ENST00000578397 ATG3Q9NT62 314 aa18.92■□□□□ 0.62
PSMD11-207ENST00000578397 NPC1L1Q9UHC9 1359 aa18.92■□□□□ 0.62
PSMD11-207ENST00000578397 C5P01031 1676 aa18.91■□□□□ 0.62
PSMD11-207ENST00000578397 TUBGCP6Q96RT7 1819 aa18.9■□□□□ 0.62
PSMD11-207ENST00000578397 ATP6V1AP38606 617 aa18.9■□□□□ 0.62
PSMD11-207ENST00000578397 CC2D1BQ5T0F9 858 aaKnown RBP18.9■□□□□ 0.62
PSMD11-207ENST00000578397 COL24A1Q17RW2 1714 aa18.9■□□□□ 0.62
PSMD11-207ENST00000578397 SSFA2P28290 1259 aa18.89■□□□□ 0.61
PSMD11-207ENST00000578397 CABP4P57796 275 aa18.89■□□□□ 0.61
PSMD11-207ENST00000578397 LINC00116Q8NCU8 138 aa18.89■□□□□ 0.61
PSMD11-207ENST00000578397 ITPK1Q13572 414 aa18.88■□□□□ 0.61
PSMD11-207ENST00000578397 KLHL34Q8N239 644 aa18.88■□□□□ 0.61
PSMD11-207ENST00000578397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.87■□□□□ 0.61
PSMD11-207ENST00000578397 KDM6AO15550 1401 aaPredicted RBP18.87■□□□□ 0.61
PSMD11-207ENST00000578397 C4BP0C0L5 1744 aa18.87■□□□□ 0.61
PSMD11-207ENST00000578397 MSL1Q68DK7 614 aa18.87■□□□□ 0.61
PSMD11-207ENST00000578397 TAF1LQ8IZX4 1826 aa18.86■□□□□ 0.61
PSMD11-207ENST00000578397 DIAPH1O60610 1272 aaKnown RBP18.86■□□□□ 0.61
PSMD11-207ENST00000578397 AMIGO3Q86WK7 504 aa18.86■□□□□ 0.61
PSMD11-207ENST00000578397 PHF14O94880 888 aa18.85■□□□□ 0.61
PSMD11-207ENST00000578397 GPR162Q16538 588 aa18.85■□□□□ 0.61
PSMD11-207ENST00000578397 AKAP4Q5JQC9 854 aa18.85■□□□□ 0.61
PSMD11-207ENST00000578397 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
PSMD11-207ENST00000578397 GNPATO15228 680 aa18.84■□□□□ 0.61
PSMD11-207ENST00000578397 RC3H1Q5TC82 1133 aaKnown RBP18.83■□□□□ 0.6
PSMD11-207ENST00000578397 NFATC2IPQ8NCF5 419 aa18.83■□□□□ 0.6
PSMD11-207ENST00000578397 SLC4A9Q96Q91 983 aa18.83■□□□□ 0.6
PSMD11-207ENST00000578397 HMOX1P09601 288 aa18.82■□□□□ 0.6
PSMD11-207ENST00000578397 SMIM5Q71RC9 77 aa18.82■□□□□ 0.6
PSMD11-207ENST00000578397 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
PSMD11-207ENST00000578397 CD2APQ9Y5K6 639 aa18.82■□□□□ 0.6
PSMD11-207ENST00000578397 RTCBQ9Y3I0 505 aaKnown RBP18.81■□□□□ 0.6
PSMD11-207ENST00000578397 CNTNAP4Q9C0A0 1308 aa18.8■□□□□ 0.6
PSMD11-207ENST00000578397 ZBTB22O15209 634 aa18.8■□□□□ 0.6
PSMD11-207ENST00000578397 TRAPPC3LQ5T215 181 aa18.8■□□□□ 0.6
PSMD11-207ENST00000578397 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
PSMD11-207ENST00000578397 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
PSMD11-207ENST00000578397 UBR3Q6ZT12 1888 aa18.79■□□□□ 0.6
PSMD11-207ENST00000578397 RPS6KA4O75676 772 aa18.78■□□□□ 0.6
PSMD11-207ENST00000578397 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
PSMD11-207ENST00000578397 SLC52A2Q9HAB3 445 aa18.78■□□□□ 0.6
PSMD11-207ENST00000578397 ZNF831Q5JPB2 1677 aa18.78■□□□□ 0.6
PSMD11-207ENST00000578397 RNMTO43148 476 aaKnown RBP18.77■□□□□ 0.6
PSMD11-207ENST00000578397 GRIN3BO60391 1043 aa18.77■□□□□ 0.6
PSMD11-207ENST00000578397 MTHFSDQ2M296 383 aaKnown RBP18.77■□□□□ 0.6
PSMD11-207ENST00000578397 LGR6Q9HBX8 967 aa18.77■□□□□ 0.6
PSMD11-207ENST00000578397 U2SURPO15042 1029 aaKnown RBP18.76■□□□□ 0.59
PSMD11-207ENST00000578397 COL3A1P02461 1466 aaPredicted RBP18.76■□□□□ 0.59
PSMD11-207ENST00000578397 NLGN1Q8N2Q7 840 aa18.75■□□□□ 0.59
PSMD11-207ENST00000578397 ARHGEF1Q92888 912 aaKnown RBP18.75■□□□□ 0.59
PSMD11-207ENST00000578397 CFAP53Q96M91 514 aa18.75■□□□□ 0.59
PSMD11-207ENST00000578397 UTRNP46939 3433 aa18.75■□□□□ 0.59
PSMD11-207ENST00000578397 ZNF784Q8NCA9 323 aaPredicted RBP18.74■□□□□ 0.59
PSMD11-207ENST00000578397 YBX3P16989 372 aaKnown RBP eCLIP18.73■□□□□ 0.596e-6■■■□□ 14.9
PSMD11-207ENST00000578397 RFC4P35249 363 aa18.73■□□□□ 0.59
PSMD11-207ENST00000578397 CRKLP46109 303 aaKnown RBP18.73■□□□□ 0.59
PSMD11-207ENST00000578397 GAS2L2Q8NHY3 880 aa18.73■□□□□ 0.59
PSMD11-207ENST00000578397 MMP10P09238 476 aa18.72■□□□□ 0.59
PSMD11-207ENST00000578397 MRC1P22897 1456 aa18.71■□□□□ 0.59
PSMD11-207ENST00000578397 SCN11AQ9UI33 1791 aa18.71■□□□□ 0.59
PSMD11-207ENST00000578397 NUDCQ9Y266 331 aa18.71■□□□□ 0.59
PSMD11-207ENST00000578397 GYS1P13807 737 aa18.7■□□□□ 0.58
PSMD11-207ENST00000578397 PPP2R1AP30153 589 aa18.7■□□□□ 0.58
PSMD11-207ENST00000578397 COL5A3P25940 1745 aaPredicted RBP18.69■□□□□ 0.58
PSMD11-207ENST00000578397 CHD4Q14839 1912 aa18.69■□□□□ 0.58
PSMD11-207ENST00000578397 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
PSMD11-207ENST00000578397 SLC39A6Q13433 755 aa18.69■□□□□ 0.58
PSMD11-207ENST00000578397 INTS5Q6P9B9 1019 aaKnown RBP18.69■□□□□ 0.58
PSMD11-207ENST00000578397 DNAJC10Q8IXB1 793 aa18.68■□□□□ 0.58
PSMD11-207ENST00000578397 VSIG10Q8N0Z9 540 aa18.68■□□□□ 0.58
PSMD11-207ENST00000578397 CCDC87Q9NVE4 849 aa18.68■□□□□ 0.58
PSMD11-207ENST00000578397 TEFQ10587 303 aa18.67■□□□□ 0.58
PSMD11-207ENST00000578397 IL17REQ8NFR9 667 aa18.67■□□□□ 0.58
PSMD11-207ENST00000578397 RSPH6AQ9H0K4 717 aa18.67■□□□□ 0.58
PSMD11-207ENST00000578397 CICQ96RK0 1608 aaPredicted RBP18.67■□□□□ 0.58
PSMD11-207ENST00000578397 ADAMTS7Q9UKP4 1686 aa18.66■□□□□ 0.58
PSMD11-207ENST00000578397 CYP19A1P11511 503 aaPredicted RBP18.66■□□□□ 0.58
PSMD11-207ENST00000578397 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
PSMD11-207ENST00000578397 TGFB2P61812 414 aa18.66■□□□□ 0.58
PSMD11-207ENST00000578397 PARP3Q9Y6F1 533 aa18.66■□□□□ 0.58
PSMD11-207ENST00000578397 USP42Q9H9J4 1324 aaKnown RBP18.66■□□□□ 0.58
PSMD11-207ENST00000578397 MYH14Q7Z406 1995 aaKnown RBP18.66■□□□□ 0.58
PSMD11-207ENST00000578397 TTC5Q8N0Z6 440 aa18.65■□□□□ 0.58
PSMD11-207ENST00000578397 GOLGB1Q14789 3259 aaKnown RBP18.64■□□□□ 0.57
PSMD11-207ENST00000578397 FCHSD2O94868 740 aa18.64■□□□□ 0.57
PSMD11-207ENST00000578397 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms