RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 NSD3Q9BZ95 1437 aa14.11□□□□□ -0.15
NPLOC4-220ENST00000576940 NMRK2Q9NPI5 230 aa14.11□□□□□ -0.15
NPLOC4-220ENST00000576940 PHKG2P15735 406 aa14.1□□□□□ -0.15
NPLOC4-220ENST00000576940 DPEP1P16444 411 aa14.1□□□□□ -0.15
NPLOC4-220ENST00000576940 ARHGEF1Q92888 912 aaKnown RBP14.1□□□□□ -0.15
NPLOC4-220ENST00000576940 SLC4A9Q96Q91 983 aa14.1□□□□□ -0.15
NPLOC4-220ENST00000576940 PXDNLA1KZ92 1463 aa14.1□□□□□ -0.15
NPLOC4-220ENST00000576940 FCHSD2O94868 740 aa14.09□□□□□ -0.15
NPLOC4-220ENST00000576940 HTRA3P83110 453 aa14.09□□□□□ -0.15
NPLOC4-220ENST00000576940 NLGN1Q8N2Q7 840 aa14.09□□□□□ -0.15
NPLOC4-220ENST00000576940 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-220ENST00000576940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.09□□□□□ -0.15
NPLOC4-220ENST00000576940 RTCBQ9Y3I0 505 aaKnown RBP14.09□□□□□ -0.15
NPLOC4-220ENST00000576940 WASHC2AQ641Q2 1341 aa14.09□□□□□ -0.15
NPLOC4-220ENST00000576940 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-220ENST00000576940 PKD1L3Q7Z443 1732 aa14.08□□□□□ -0.16
NPLOC4-220ENST00000576940 KCNA3P22001 575 aa14.07□□□□□ -0.16
NPLOC4-220ENST00000576940 NCAPD2Q15021 1401 aa14.07□□□□□ -0.16
NPLOC4-220ENST00000576940 GYS1P13807 737 aa14.06□□□□□ -0.16
NPLOC4-220ENST00000576940 RFC4P35249 363 aa14.06□□□□□ -0.16
NPLOC4-220ENST00000576940 C9orf131Q5VYM1 1079 aa14.06□□□□□ -0.16
NPLOC4-220ENST00000576940 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
NPLOC4-220ENST00000576940 POLKQ9UBT6 870 aa14.06□□□□□ -0.16
NPLOC4-220ENST00000576940 KIF20BQ96Q89 1820 aa14.06□□□□□ -0.16
NPLOC4-220ENST00000576940 CICQ96RK0 1608 aaPredicted RBP14.05□□□□□ -0.16
NPLOC4-220ENST00000576940 KIAA1551Q9HCM1 1747 aa14.05□□□□□ -0.16
NPLOC4-220ENST00000576940 RPS6KA4O75676 772 aa14.05□□□□□ -0.16
NPLOC4-220ENST00000576940 CDCA8Q53HL2 280 aa14.05□□□□□ -0.16
NPLOC4-220ENST00000576940 PARP3Q9Y6F1 533 aa14.05□□□□□ -0.16
NPLOC4-220ENST00000576940 TNNT2P45379 298 aaPredicted RBP14.04□□□□□ -0.16
NPLOC4-220ENST00000576940 EIF4A2Q14240 407 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-220ENST00000576940 RC3H1Q5TC82 1133 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-220ENST00000576940 KIF13BQ9NQT8 1826 aa14.04□□□□□ -0.16
NPLOC4-220ENST00000576940 ERVV-2B6SEH9 535 aa14.03□□□□□ -0.16
NPLOC4-220ENST00000576940 COL13A1Q5TAT6 717 aaPredicted RBP14.03□□□□□ -0.16
NPLOC4-220ENST00000576940 RBM46Q8TBY0 533 aaKnown RBP14.03□□□□□ -0.16
NPLOC4-220ENST00000576940 RRAGCQ9HB90 399 aa14.03□□□□□ -0.16
NPLOC4-220ENST00000576940 PIM2Q9P1W9 311 aa14.03□□□□□ -0.16
NPLOC4-220ENST00000576940 C10orf71Q711Q0 1435 aa14.03□□□□□ -0.16
NPLOC4-220ENST00000576940 KDRP35968 1356 aa14.02□□□□□ -0.17
NPLOC4-220ENST00000576940 ADRA2BP18089 450 aa14.02□□□□□ -0.17
NPLOC4-220ENST00000576940 C16orf71Q8IYS4 520 aaPredicted RBP14.02□□□□□ -0.17
NPLOC4-220ENST00000576940 KLRG1Q96E93 195 aa14.02□□□□□ -0.17
NPLOC4-220ENST00000576940 SRP68Q9UHB9 627 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-220ENST00000576940 PCNTO95613 3336 aa14.01□□□□□ -0.17
NPLOC4-220ENST00000576940 CNTNAP4Q9C0A0 1308 aa14.01□□□□□ -0.17
NPLOC4-220ENST00000576940 CABP4P57796 275 aa14.01□□□□□ -0.17
NPLOC4-220ENST00000576940 FKBP8Q14318 412 aa14.01□□□□□ -0.17
NPLOC4-220ENST00000576940 PTCD1O75127 700 aaKnown RBP14□□□□□ -0.17
NPLOC4-220ENST00000576940 CHRNA5P30532 468 aa14□□□□□ -0.17
NPLOC4-220ENST00000576940 DALRD3Q5D0E6 543 aaKnown RBP14□□□□□ -0.17
NPLOC4-220ENST00000576940 DCAF5Q96JK2 942 aa14□□□□□ -0.17
NPLOC4-220ENST00000576940 RNF181Q9P0P0 153 aa14□□□□□ -0.17
NPLOC4-220ENST00000576940 C4AP0C0L4 1744 aa13.99□□□□□ -0.17
NPLOC4-220ENST00000576940 CAPN15O75808 1086 aa13.99□□□□□ -0.17
NPLOC4-220ENST00000576940 DDR1Q08345 913 aa13.99□□□□□ -0.17
NPLOC4-220ENST00000576940 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
NPLOC4-220ENST00000576940 JMYQ8N9B5 988 aa13.99□□□□□ -0.17
NPLOC4-220ENST00000576940 KCPQ6ZWJ8 1503 aa13.99□□□□□ -0.17
NPLOC4-220ENST00000576940 MYH14Q7Z406 1995 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-220ENST00000576940 HSP90AB1P08238 724 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-220ENST00000576940 CRKLP46109 303 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-220ENST00000576940 FSTL1Q12841 308 aa13.98□□□□□ -0.17
NPLOC4-220ENST00000576940 NFATC2IPQ8NCF5 419 aa13.98□□□□□ -0.17
NPLOC4-220ENST00000576940 POLR3GLQ9BT43 218 aa13.98□□□□□ -0.17
NPLOC4-220ENST00000576940 WDR90Q96KV7 1748 aa13.98□□□□□ -0.17
NPLOC4-220ENST00000576940 BRCA1P38398 1863 aaKnown RBP13.97□□□□□ -0.17
NPLOC4-220ENST00000576940 KDM2BQ8NHM5 1336 aa13.97□□□□□ -0.17
NPLOC4-220ENST00000576940 MTHFSP49914 203 aa13.97□□□□□ -0.17
NPLOC4-220ENST00000576940 ZNF530Q6P9A1 599 aaPredicted RBP13.97□□□□□ -0.17
NPLOC4-220ENST00000576940 TM4SF1P30408 202 aa13.96□□□□□ -0.17
NPLOC4-220ENST00000576940 KDM6AO15550 1401 aaPredicted RBP13.96□□□□□ -0.18
NPLOC4-220ENST00000576940 PLEKHG2Q9H7P9 1386 aa13.96□□□□□ -0.18
NPLOC4-220ENST00000576940 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
NPLOC4-220ENST00000576940 USP42Q9H9J4 1324 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-220ENST00000576940 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-220ENST00000576940 AEBP1Q8IUX7 1158 aa13.95□□□□□ -0.18
NPLOC4-220ENST00000576940 COL5A3P25940 1745 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-220ENST00000576940 ARFGEF1Q9Y6D6 1849 aa13.94□□□□□ -0.18
NPLOC4-220ENST00000576940 POLRMTO00411 1230 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-220ENST00000576940 RASSF7Q02833 373 aa13.94□□□□□ -0.18
NPLOC4-220ENST00000576940 AMOTQ4VCS5 1084 aa13.94□□□□□ -0.18
NPLOC4-220ENST00000576940 USPL1Q5W0Q7 1092 aa13.94□□□□□ -0.18
NPLOC4-220ENST00000576940 PRELPP51888 382 aa13.93□□□□□ -0.18
NPLOC4-220ENST00000576940 TNS4Q8IZW8 715 aa13.93□□□□□ -0.18
NPLOC4-220ENST00000576940 SMC1BQ8NDV3 1235 aa13.93□□□□□ -0.18
NPLOC4-220ENST00000576940 ZNF831Q5JPB2 1677 aa13.93□□□□□ -0.18
NPLOC4-220ENST00000576940 C1orf141Q5JVX7 400 aa13.92□□□□□ -0.18
NPLOC4-220ENST00000576940 DNAJC10Q8IXB1 793 aa13.92□□□□□ -0.18
NPLOC4-220ENST00000576940 SBF1O95248 1867 aa13.92□□□□□ -0.18
NPLOC4-220ENST00000576940 ZPR1O75312 459 aa13.91□□□□□ -0.18
NPLOC4-220ENST00000576940 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
NPLOC4-220ENST00000576940 NFIXQ14938 502 aa13.9□□□□□ -0.18
NPLOC4-220ENST00000576940 PANK3Q9H999 370 aa13.9□□□□□ -0.18
NPLOC4-220ENST00000576940 LGR6Q9HBX8 967 aa13.9□□□□□ -0.18
NPLOC4-220ENST00000576940 GLTPD2A6NH11 291 aa13.89□□□□□ -0.19
NPLOC4-220ENST00000576940 VEGFAP15692 232 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-220ENST00000576940 SLC39A6Q13433 755 aa13.89□□□□□ -0.19
NPLOC4-220ENST00000576940 SERPINB2P05120 415 aa13.88□□□□□ -0.19
NPLOC4-220ENST00000576940 HSPA1AP0DMV8 641 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms