RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 DNAJC5GQ8N7S2 189 aa12.48□□□□□ -0.41
SMG6-218ENST00000575454 EYA1Q99502 592 aa12.48□□□□□ -0.41
SMG6-218ENST00000575454 ATG3Q9NT62 314 aa12.48□□□□□ -0.41
SMG6-218ENST00000575454 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
SMG6-218ENST00000575454 PLEKHG2Q9H7P9 1386 aa12.47□□□□□ -0.41
SMG6-218ENST00000575454 ERVV-2B6SEH9 535 aa12.47□□□□□ -0.41
SMG6-218ENST00000575454 FCHSD2O94868 740 aa12.47□□□□□ -0.41
SMG6-218ENST00000575454 RFC4P35249 363 aa12.47□□□□□ -0.41
SMG6-218ENST00000575454 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
SMG6-218ENST00000575454 NCAPD2Q15021 1401 aa12.46□□□□□ -0.41
SMG6-218ENST00000575454 KAT6BQ8WYB5 2073 aa12.46□□□□□ -0.41
SMG6-218ENST00000575454 FSTL1Q12841 308 aa12.46□□□□□ -0.41
SMG6-218ENST00000575454 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
SMG6-218ENST00000575454 DCAF5Q96JK2 942 aa12.46□□□□□ -0.41
SMG6-218ENST00000575454 CARD14Q9BXL6 1004 aa12.46□□□□□ -0.41
SMG6-218ENST00000575454 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
SMG6-218ENST00000575454 DPEP1P16444 411 aa12.45□□□□□ -0.42
SMG6-218ENST00000575454 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
SMG6-218ENST00000575454 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
SMG6-218ENST00000575454 PXDNLA1KZ92 1463 aa12.45□□□□□ -0.42
SMG6-218ENST00000575454 C4BP0C0L5 1744 aa12.45□□□□□ -0.42
SMG6-218ENST00000575454 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
SMG6-218ENST00000575454 CNTNAP4Q9C0A0 1308 aa12.44□□□□□ -0.42
SMG6-218ENST00000575454 GYS1P13807 737 aa12.44□□□□□ -0.42
SMG6-218ENST00000575454 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
SMG6-218ENST00000575454 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
SMG6-218ENST00000575454 C5P01031 1676 aa12.43□□□□□ -0.42
SMG6-218ENST00000575454 PLEKHO1Q53GL0 409 aaPredicted RBP12.43□□□□□ -0.42
SMG6-218ENST00000575454 DALRD3Q5D0E6 543 aaKnown RBP12.43□□□□□ -0.42
SMG6-218ENST00000575454 KLRG1Q96E93 195 aa12.43□□□□□ -0.42
SMG6-218ENST00000575454 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
SMG6-218ENST00000575454 C10orf71Q711Q0 1435 aa12.43□□□□□ -0.42
SMG6-218ENST00000575454 CABP4P57796 275 aa12.42□□□□□ -0.42
SMG6-218ENST00000575454 AMOTQ4VCS5 1084 aa12.42□□□□□ -0.42
SMG6-218ENST00000575454 CAPN15O75808 1086 aa12.41□□□□□ -0.42
SMG6-218ENST00000575454 EIF4A2Q14240 407 aaKnown RBP12.41□□□□□ -0.42
SMG6-218ENST00000575454 JMYQ8N9B5 988 aa12.41□□□□□ -0.42
SMG6-218ENST00000575454 SLC4A9Q96Q91 983 aa12.41□□□□□ -0.42
SMG6-218ENST00000575454 KDRP35968 1356 aa12.41□□□□□ -0.42
SMG6-218ENST00000575454 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
SMG6-218ENST00000575454 KCNA3P22001 575 aa12.4□□□□□ -0.42
SMG6-218ENST00000575454 MTHFSP49914 203 aa12.39□□□□□ -0.43
SMG6-218ENST00000575454 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
SMG6-218ENST00000575454 RNF181Q9P0P0 153 aa12.39□□□□□ -0.43
SMG6-218ENST00000575454 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
SMG6-218ENST00000575454 C1orf141Q5JVX7 400 aa12.38□□□□□ -0.43
SMG6-218ENST00000575454 ZNF530Q6P9A1 599 aaPredicted RBP12.38□□□□□ -0.43
SMG6-218ENST00000575454 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
SMG6-218ENST00000575454 TNNT2P45379 298 aaPredicted RBP12.37□□□□□ -0.43
SMG6-218ENST00000575454 CRKLP46109 303 aaKnown RBP12.37□□□□□ -0.43
SMG6-218ENST00000575454 COL13A1Q5TAT6 717 aaPredicted RBP12.37□□□□□ -0.43
SMG6-218ENST00000575454 RRAGCQ9HB90 399 aa12.37□□□□□ -0.43
SMG6-218ENST00000575454 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
SMG6-218ENST00000575454 ZPR1O75312 459 aa12.36□□□□□ -0.43
SMG6-218ENST00000575454 FKBP8Q14318 412 aa12.36□□□□□ -0.43
SMG6-218ENST00000575454 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
SMG6-218ENST00000575454 NFATC2IPQ8NCF5 419 aa12.35□□□□□ -0.43
SMG6-218ENST00000575454 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
SMG6-218ENST00000575454 TOGARAM1Q9Y4F4 1720 aa12.34□□□□□ -0.43
SMG6-218ENST00000575454 POLRMTO00411 1230 aaKnown RBP12.34□□□□□ -0.43
SMG6-218ENST00000575454 VEGFAP15692 232 aaPredicted RBP12.34□□□□□ -0.43
SMG6-218ENST00000575454 TM4SF1P30408 202 aa12.34□□□□□ -0.43
SMG6-218ENST00000575454 HTRA3P83110 453 aa12.34□□□□□ -0.43
SMG6-218ENST00000575454 DDR1Q08345 913 aa12.34□□□□□ -0.43
SMG6-218ENST00000575454 TNS4Q8IZW8 715 aa12.34□□□□□ -0.43
SMG6-218ENST00000575454 PKD1L3Q7Z443 1732 aa12.34□□□□□ -0.43
SMG6-218ENST00000575454 LMNB1P20700 586 aa12.33□□□□□ -0.44
SMG6-218ENST00000575454 CHRNA5P30532 468 aa12.33□□□□□ -0.44
SMG6-218ENST00000575454 INTS5Q6P9B9 1019 aaKnown RBP12.33□□□□□ -0.44
SMG6-218ENST00000575454 UBR3Q6ZT12 1888 aa12.32□□□□□ -0.44
SMG6-218ENST00000575454 GLTPD2A6NH11 291 aa12.32□□□□□ -0.44
SMG6-218ENST00000575454 PRELPP51888 382 aa12.32□□□□□ -0.44
SMG6-218ENST00000575454 POLR3GLQ9BT43 218 aa12.32□□□□□ -0.44
SMG6-218ENST00000575454 RGPD2P0DJD1 1756 aa12.32□□□□□ -0.44
SMG6-218ENST00000575454 WDR90Q96KV7 1748 aa12.31□□□□□ -0.44
SMG6-218ENST00000575454 KDM6AO15550 1401 aaPredicted RBP12.31□□□□□ -0.44
SMG6-218ENST00000575454 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
SMG6-218ENST00000575454 TTLL6Q8N841 843 aa12.31□□□□□ -0.44
SMG6-218ENST00000575454 TAF1LQ8IZX4 1826 aa12.31□□□□□ -0.44
SMG6-218ENST00000575454 KCPQ6ZWJ8 1503 aa12.31□□□□□ -0.44
SMG6-218ENST00000575454 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
SMG6-218ENST00000575454 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
SMG6-218ENST00000575454 SULT6B1Q6IMI4 303 aa12.3□□□□□ -0.44
SMG6-218ENST00000575454 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
SMG6-218ENST00000575454 MORC1Q86VD1 984 aa12.3□□□□□ -0.44
SMG6-218ENST00000575454 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
SMG6-218ENST00000575454 SOS1Q07889 1333 aaPredicted RBP12.3□□□□□ -0.44
SMG6-218ENST00000575454 H0YIN7 160 aa12.29□□□□□ -0.44
SMG6-218ENST00000575454 NFIXQ14938 502 aa12.29□□□□□ -0.44
SMG6-218ENST00000575454 AEBP1Q8IUX7 1158 aa12.29□□□□□ -0.44
SMG6-218ENST00000575454 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
SMG6-218ENST00000575454 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
SMG6-218ENST00000575454 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
SMG6-218ENST00000575454 SERPINB2P05120 415 aa12.28□□□□□ -0.44
SMG6-218ENST00000575454 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
SMG6-218ENST00000575454 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
SMG6-218ENST00000575454 PANK3Q9H999 370 aa12.28□□□□□ -0.44
SMG6-218ENST00000575454 SLC52A2Q9HAB3 445 aa12.28□□□□□ -0.44
SMG6-218ENST00000575454 A0A087WZG4 1122 aa12.27□□□□□ -0.45
SMG6-218ENST00000575454 RASSF7Q02833 373 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms