RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 SLC52A2Q9HAB3 445 aa17.76■□□□□ 0.43
ERCC4-207ENST00000575156 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
ERCC4-207ENST00000575156 ALDH1L2Q3SY69 923 aa17.75■□□□□ 0.43
ERCC4-207ENST00000575156 SCN11AQ9UI33 1791 aa17.75■□□□□ 0.43
ERCC4-207ENST00000575156 MRPL50Q8N5N7 158 aaKnown RBP17.75■□□□□ 0.43
ERCC4-207ENST00000575156 NOB1Q9ULX3 412 aaKnown RBP17.75■□□□□ 0.43
ERCC4-207ENST00000575156 HSP90AB1P08238 724 aaKnown RBP17.74■□□□□ 0.43
ERCC4-207ENST00000575156 EIF4A1P60842 406 aaKnown RBP17.74■□□□□ 0.43
ERCC4-207ENST00000575156 MEX3CQ5U5Q3 659 aaKnown RBP17.74■□□□□ 0.43
ERCC4-207ENST00000575156 PANK1Q8TE04 598 aa17.74■□□□□ 0.43
ERCC4-207ENST00000575156 ZNF428Q96B54 188 aa17.74■□□□□ 0.43
ERCC4-207ENST00000575156 RLBP1P12271 317 aa17.73■□□□□ 0.43
ERCC4-207ENST00000575156 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
ERCC4-207ENST00000575156 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
ERCC4-207ENST00000575156 ERICH6BQ5W0A0 696 aa17.73■□□□□ 0.43
ERCC4-207ENST00000575156 CLUAP1Q96AJ1 413 aa17.73■□□□□ 0.43
ERCC4-207ENST00000575156 USP21Q9UK80 565 aa17.73■□□□□ 0.43
ERCC4-207ENST00000575156 SIPA1L3O60292 1781 aaPredicted RBP17.73■□□□□ 0.43
ERCC4-207ENST00000575156 KDM3BQ7LBC6 1761 aa17.72■□□□□ 0.43
ERCC4-207ENST00000575156 THRAP3Q9Y2W1 955 aaKnown RBP17.72■□□□□ 0.43
ERCC4-207ENST00000575156 VPS72Q15906 364 aa17.71■□□□□ 0.43
ERCC4-207ENST00000575156 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
ERCC4-207ENST00000575156 MRC1P22897 1456 aa17.71■□□□□ 0.43
ERCC4-207ENST00000575156 EXOC5O00471 708 aa17.71■□□□□ 0.43
ERCC4-207ENST00000575156 CABP4P57796 275 aa17.71■□□□□ 0.43
ERCC4-207ENST00000575156 ZKSCAN2Q63HK3 967 aa17.71■□□□□ 0.43
ERCC4-207ENST00000575156 TRIM27P14373 513 aa17.7■□□□□ 0.42
ERCC4-207ENST00000575156 PPP4R2Q9NY27 417 aa17.7■□□□□ 0.42
ERCC4-207ENST00000575156 WNK3Q9BYP7 1800 aa17.7■□□□□ 0.42
ERCC4-207ENST00000575156 BRPF1P55201 1214 aaPredicted RBP17.7■□□□□ 0.42
ERCC4-207ENST00000575156 PDE3AQ14432 1141 aa17.7■□□□□ 0.42
ERCC4-207ENST00000575156 FAM98CQ17RN3 349 aaKnown RBP17.7■□□□□ 0.42
ERCC4-207ENST00000575156 AFF2P51816 1311 aa17.69■□□□□ 0.42
ERCC4-207ENST00000575156 PRAMEF22A3QJZ6 481 aa17.69■□□□□ 0.42
ERCC4-207ENST00000575156 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
ERCC4-207ENST00000575156 ZNF790Q6PG37 636 aa17.69■□□□□ 0.42
ERCC4-207ENST00000575156 BARGINQ6ZT62 677 aa17.69■□□□□ 0.42
ERCC4-207ENST00000575156 COG6Q9Y2V7 657 aa17.69■□□□□ 0.42
ERCC4-207ENST00000575156 TNS2Q63HR2 1409 aa17.69■□□□□ 0.42
ERCC4-207ENST00000575156 KIF16BQ96L93 1317 aa17.68■□□□□ 0.42
ERCC4-207ENST00000575156 ATF7IPQ6VMQ6 1270 aa17.68■□□□□ 0.42
ERCC4-207ENST00000575156 DDB1Q16531 1140 aa17.68■□□□□ 0.42
ERCC4-207ENST00000575156 CDCA7Q9BWT1 371 aaPredicted RBP17.68■□□□□ 0.42
ERCC4-207ENST00000575156 ERVV-2B6SEH9 535 aa17.67■□□□□ 0.42
ERCC4-207ENST00000575156 TOGARAM1Q9Y4F4 1720 aa17.67■□□□□ 0.42
ERCC4-207ENST00000575156 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
ERCC4-207ENST00000575156 HEG1Q9ULI3 1381 aa17.66■□□□□ 0.42
ERCC4-207ENST00000575156 EIF2S2P20042 333 aaKnown RBP17.66■□□□□ 0.42
ERCC4-207ENST00000575156 G2E3Q7L622 706 aa17.66■□□□□ 0.42
ERCC4-207ENST00000575156 DZIP1LQ8IYY4 767 aaKnown RBP17.66■□□□□ 0.42
ERCC4-207ENST00000575156 ZNF496Q96IT1 587 aaPredicted RBP17.66■□□□□ 0.42
ERCC4-207ENST00000575156 GIGYF1O75420 1035 aaPredicted RBP17.65■□□□□ 0.42
ERCC4-207ENST00000575156 HDGFL1Q5TGJ6 251 aa17.65■□□□□ 0.42
ERCC4-207ENST00000575156 IPO8O15397 1037 aaKnown RBP17.65■□□□□ 0.42
ERCC4-207ENST00000575156 FTSJ3Q8IY81 847 aaKnown RBP17.65■□□□□ 0.42
ERCC4-207ENST00000575156 MARCH10Q8NA82 808 aaPredicted RBP17.65■□□□□ 0.42
ERCC4-207ENST00000575156 CCDC30Q5VVM6 783 aa17.64■□□□□ 0.41
ERCC4-207ENST00000575156 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
ERCC4-207ENST00000575156 TTC5Q8N0Z6 440 aa17.63■□□□□ 0.41
ERCC4-207ENST00000575156 TMEM57Q8N5G2 664 aa17.63■□□□□ 0.41
ERCC4-207ENST00000575156 PIGBQ92521 554 aa17.63■□□□□ 0.41
ERCC4-207ENST00000575156 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.63■□□□□ 0.41
ERCC4-207ENST00000575156 HOXB7P09629 217 aa17.62■□□□□ 0.41
ERCC4-207ENST00000575156 ARHGAP45Q92619 1136 aa17.62■□□□□ 0.41
ERCC4-207ENST00000575156 TMOD3Q9NYL9 352 aa17.62■□□□□ 0.41
ERCC4-207ENST00000575156 GJD4Q96KN9 370 aaPredicted RBP17.62■□□□□ 0.41
ERCC4-207ENST00000575156 STK31Q9BXU1 1019 aa17.62■□□□□ 0.41
ERCC4-207ENST00000575156 A0A0G2JS52 829 aa17.61■□□□□ 0.41
ERCC4-207ENST00000575156 ANXA1P04083 346 aa17.61■□□□□ 0.41
ERCC4-207ENST00000575156 MYT1Q01538 1121 aa17.61■□□□□ 0.41
ERCC4-207ENST00000575156 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
ERCC4-207ENST00000575156 CHPF2Q9P2E5 772 aa17.61■□□□□ 0.41
ERCC4-207ENST00000575156 RGS12O14924 1447 aa17.61■□□□□ 0.41
ERCC4-207ENST00000575156 CCDC136Q96JN2 1154 aa17.6■□□□□ 0.41
ERCC4-207ENST00000575156 ATRNO75882 1429 aa17.6■□□□□ 0.41
ERCC4-207ENST00000575156 GLI3P10071 1580 aa17.6■□□□□ 0.41
ERCC4-207ENST00000575156 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
ERCC4-207ENST00000575156 ITPRIPQ8IWB1 547 aa17.6■□□□□ 0.41
ERCC4-207ENST00000575156 SYTL4Q96C24 671 aaPredicted RBP17.6■□□□□ 0.41
ERCC4-207ENST00000575156 FMNL2Q96PY5 1086 aa17.6■□□□□ 0.41
ERCC4-207ENST00000575156 ASAP1Q9ULH1 1129 aa17.6■□□□□ 0.41
ERCC4-207ENST00000575156 PTCD1O75127 700 aaKnown RBP17.59■□□□□ 0.41
ERCC4-207ENST00000575156 MS4A1P11836 297 aa17.59■□□□□ 0.41
ERCC4-207ENST00000575156 PROSER3Q2NL68 480 aa17.59■□□□□ 0.41
ERCC4-207ENST00000575156 ACSBG1Q96GR2 724 aa17.59■□□□□ 0.41
ERCC4-207ENST00000575156 PHAXQ9H814 394 aaKnown RBP17.59■□□□□ 0.41
ERCC4-207ENST00000575156 ABCC4O15439 1325 aa17.59■□□□□ 0.41
ERCC4-207ENST00000575156 FLIIQ13045 1269 aa17.59■□□□□ 0.41
ERCC4-207ENST00000575156 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
ERCC4-207ENST00000575156 TRPC5Q9UL62 973 aaPredicted RBP17.59■□□□□ 0.41
ERCC4-207ENST00000575156 USP16Q9Y5T5 823 aa17.59■□□□□ 0.41
ERCC4-207ENST00000575156 C5P01031 1676 aa17.58■□□□□ 0.41
ERCC4-207ENST00000575156 KCPQ6ZWJ8 1503 aa17.58■□□□□ 0.4
ERCC4-207ENST00000575156 QTRT2Q9H974 415 aaKnown RBP17.58■□□□□ 0.4
ERCC4-207ENST00000575156 ATG3Q9NT62 314 aa17.58■□□□□ 0.4
ERCC4-207ENST00000575156 BCL9O00512 1426 aa17.58■□□□□ 0.4
ERCC4-207ENST00000575156 F6X3S4 739 aa17.57■□□□□ 0.4
ERCC4-207ENST00000575156 SNRPA1P09661 255 aaKnown RBP17.57■□□□□ 0.4
ERCC4-207ENST00000575156 PTPRCP08575 1304 aa17.57■□□□□ 0.4
ERCC4-207ENST00000575156 PAPPAQ13219 1627 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms