RNA–Protein interactions for RNA: ENST00000574744.1

TOM1L1-219, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-219ENST00000574744 RGL2O15211 777 aa11.9□□□□□ -0.5
TOM1L1-219ENST00000574744 MVPQ14764 893 aaKnown RBP11.9□□□□□ -0.5
TOM1L1-219ENST00000574744 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
TOM1L1-219ENST00000574744 DDX17Q92841 729 aaKnown RBP11.9□□□□□ -0.5
TOM1L1-219ENST00000574744 CLUAP1Q96AJ1 413 aa11.9□□□□□ -0.5
TOM1L1-219ENST00000574744 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.5
TOM1L1-219ENST00000574744 DDX19BQ9UMR2 479 aa11.9□□□□□ -0.5
TOM1L1-219ENST00000574744 AXIN2Q9Y2T1 843 aa11.9□□□□□ -0.5
TOM1L1-219ENST00000574744 CACNA1FO60840 1977 aa11.9□□□□□ -0.5
TOM1L1-219ENST00000574744 TRIM27P14373 513 aa11.89□□□□□ -0.51
TOM1L1-219ENST00000574744 ZC3H6P61129 1189 aaKnown RBP11.89□□□□□ -0.51
TOM1L1-219ENST00000574744 FTSJ3Q8IY81 847 aaKnown RBP11.89□□□□□ -0.51
TOM1L1-219ENST00000574744 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
TOM1L1-219ENST00000574744 KDM3BQ7LBC6 1761 aa11.89□□□□□ -0.51
TOM1L1-219ENST00000574744 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
TOM1L1-219ENST00000574744 ROBO1Q9Y6N7 1651 aa11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 ZBTB7CA1YPR0 619 aa11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 TAF7Q15545 349 aaPredicted RBP11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 USHBP1Q8N6Y0 703 aa11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 TSPYL6Q8N831 410 aa11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 PANK1Q8TE04 598 aa11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 API5Q9BZZ5 524 aaKnown RBP11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 TSPYL2Q9H2G4 693 aaPredicted RBP11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 TSPYL4Q9UJ04 414 aa11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 NOB1Q9ULX3 412 aaKnown RBP11.88□□□□□ -0.51
TOM1L1-219ENST00000574744 HOXB7P09629 217 aa11.87□□□□□ -0.51
TOM1L1-219ENST00000574744 CHRM1P11229 460 aaPredicted RBP11.87□□□□□ -0.51
TOM1L1-219ENST00000574744 RLBP1P12271 317 aa11.87□□□□□ -0.51
TOM1L1-219ENST00000574744 ZNF530Q6P9A1 599 aaPredicted RBP11.87□□□□□ -0.51
TOM1L1-219ENST00000574744 IL17REQ8NFR9 667 aa11.87□□□□□ -0.51
TOM1L1-219ENST00000574744 COG6Q9Y2V7 657 aa11.87□□□□□ -0.51
TOM1L1-219ENST00000574744 PTPRCP08575 1304 aa11.86□□□□□ -0.51
TOM1L1-219ENST00000574744 PARP4Q9UKK3 1724 aaKnown RBP11.86□□□□□ -0.51
TOM1L1-219ENST00000574744 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
TOM1L1-219ENST00000574744 C1orf141Q5JVX7 400 aa11.86□□□□□ -0.51
TOM1L1-219ENST00000574744 RAPGEF4Q8WZA2 1011 aa11.86□□□□□ -0.51
TOM1L1-219ENST00000574744 TSHZ2Q9NRE2 1034 aa11.86□□□□□ -0.51
TOM1L1-219ENST00000574744 SIPA1L3O60292 1781 aaPredicted RBP11.86□□□□□ -0.51
TOM1L1-219ENST00000574744 ABCC4O15439 1325 aa11.86□□□□□ -0.51
TOM1L1-219ENST00000574744 WDR17Q8IZU2 1322 aa11.86□□□□□ -0.51
TOM1L1-219ENST00000574744 COL5A2P05997 1499 aaPredicted RBP11.85□□□□□ -0.51
TOM1L1-219ENST00000574744 TCERG1O14776 1098 aaKnown RBP11.85□□□□□ -0.51
TOM1L1-219ENST00000574744 TATP17735 454 aaPredicted RBP11.85□□□□□ -0.51
TOM1L1-219ENST00000574744 PRDM11Q9NQV5 511 aa11.85□□□□□ -0.51
TOM1L1-219ENST00000574744 SCN11AQ9UI33 1791 aa11.84□□□□□ -0.51
TOM1L1-219ENST00000574744 MRC1P22897 1456 aa11.84□□□□□ -0.51
TOM1L1-219ENST00000574744 RNMTO43148 476 aaKnown RBP11.84□□□□□ -0.51
TOM1L1-219ENST00000574744 CABLES1Q8TDN4 633 aa11.84□□□□□ -0.51
TOM1L1-219ENST00000574744 NLRP2Q9NX02 1062 aa11.84□□□□□ -0.51
TOM1L1-219ENST00000574744 SPG7Q9UQ90 795 aa11.84□□□□□ -0.51
TOM1L1-219ENST00000574744 COL14A1Q05707 1796 aaKnown RBP11.84□□□□□ -0.51
TOM1L1-219ENST00000574744 MEGF6O75095 1541 aa11.83□□□□□ -0.52
TOM1L1-219ENST00000574744 HSP90AB1P08238 724 aaKnown RBP11.83□□□□□ -0.52
TOM1L1-219ENST00000574744 CSB-PGBD3P0DP91 1061 aa11.83□□□□□ -0.52
TOM1L1-219ENST00000574744 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
TOM1L1-219ENST00000574744 PYGBP11216 843 aa11.82□□□□□ -0.52
TOM1L1-219ENST00000574744 TEFQ10587 303 aa11.82□□□□□ -0.52
TOM1L1-219ENST00000574744 CCDC30Q5VVM6 783 aa11.82□□□□□ -0.52
TOM1L1-219ENST00000574744 TMEM57Q8N5G2 664 aa11.82□□□□□ -0.52
TOM1L1-219ENST00000574744 CARD10Q9BWT7 1032 aa11.82□□□□□ -0.52
TOM1L1-219ENST00000574744 TNNQ9UQP3 1299 aa11.82□□□□□ -0.52
TOM1L1-219ENST00000574744 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
TOM1L1-219ENST00000574744 RGS12O14924 1447 aa11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 ELL2O00472 640 aaPredicted RBP11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 HDAC1Q13547 482 aaPredicted RBP11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 CHRNA2Q15822 529 aa11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 INTS3Q68E01 1043 aaKnown RBP11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 ITPRIPQ8IWB1 547 aa11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 IFNL2Q8IZJ0 200 aa11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 RWDD1Q9H446 243 aaPredicted RBP11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 COL16A1Q07092 1604 aaPredicted RBP11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 PXDNLA1KZ92 1463 aa11.81□□□□□ -0.52
TOM1L1-219ENST00000574744 HEG1Q9ULI3 1381 aa11.8□□□□□ -0.52
TOM1L1-219ENST00000574744 PHKG2P15735 406 aa11.8□□□□□ -0.52
TOM1L1-219ENST00000574744 EIF4A1P60842 406 aaKnown RBP11.8□□□□□ -0.52
TOM1L1-219ENST00000574744 STK31Q9BXU1 1019 aa11.8□□□□□ -0.52
TOM1L1-219ENST00000574744 PLCH1Q4KWH8 1693 aa11.79□□□□□ -0.52
TOM1L1-219ENST00000574744 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
TOM1L1-219ENST00000574744 DCAF5Q96JK2 942 aa11.79□□□□□ -0.52
TOM1L1-219ENST00000574744 LGR6Q9HBX8 967 aa11.79□□□□□ -0.52
TOM1L1-219ENST00000574744 MIS18AQ9NYP9 233 aa11.79□□□□□ -0.52
TOM1L1-219ENST00000574744 PHLPP1O60346 1717 aa11.79□□□□□ -0.52
TOM1L1-219ENST00000574744 KDM6AO15550 1401 aaPredicted RBP11.78□□□□□ -0.52
TOM1L1-219ENST00000574744 BTBD11A6QL63 1104 aa11.78□□□□□ -0.52
TOM1L1-219ENST00000574744 ZBTB7BO15156 539 aaPredicted RBP11.78□□□□□ -0.52
TOM1L1-219ENST00000574744 TOM1O60784 492 aa11.78□□□□□ -0.52
TOM1L1-219ENST00000574744 KRT24Q2M2I5 525 aa11.78□□□□□ -0.52
TOM1L1-219ENST00000574744 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
TOM1L1-219ENST00000574744 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
TOM1L1-219ENST00000574744 PCDH11XQ9BZA7 1347 aa11.78□□□□□ -0.52
TOM1L1-219ENST00000574744 PCDH11YQ9BZA8 1340 aa11.78□□□□□ -0.52
TOM1L1-219ENST00000574744 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
TOM1L1-219ENST00000574744 TOM1L2Q6ZVM7 507 aa11.77□□□□□ -0.53
TOM1L1-219ENST00000574744 SLC52A2Q9HAB3 445 aa11.77□□□□□ -0.53
TOM1L1-219ENST00000574744 IGHDP01880 384 aa11.76□□□□□ -0.53
TOM1L1-219ENST00000574744 IL2RBP14784 551 aa11.76□□□□□ -0.53
TOM1L1-219ENST00000574744 CCT4P50991 539 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms