RNA–Protein interactions for RNA: ENST00000574266.1

ABR-227, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-227ENST00000574266 TUBGCP6Q96RT7 1819 aa23.52■■□□□ 1.36
ABR-227ENST00000574266 TRAPPC3LQ5T215 181 aa23.52■■□□□ 1.36
ABR-227ENST00000574266 NLGN2Q8NFZ4 835 aa23.52■■□□□ 1.36
ABR-227ENST00000574266 RTCBQ9Y3I0 505 aaKnown RBP23.52■■□□□ 1.36
ABR-227ENST00000574266 AMER1Q5JTC6 1135 aaPredicted RBP23.51■■□□□ 1.35
ABR-227ENST00000574266 C4BP0C0L5 1744 aa23.5■■□□□ 1.35
ABR-227ENST00000574266 TOGARAM1Q9Y4F4 1720 aa23.5■■□□□ 1.35
ABR-227ENST00000574266 IL13P35225 146 aa23.5■■□□□ 1.35
ABR-227ENST00000574266 CC2D1BQ5T0F9 858 aaKnown RBP23.5■■□□□ 1.35
ABR-227ENST00000574266 AEBP1Q8IUX7 1158 aa23.5■■□□□ 1.35
ABR-227ENST00000574266 ZNF784Q8NCA9 323 aaPredicted RBP23.5■■□□□ 1.35
ABR-227ENST00000574266 ITPK1Q13572 414 aa23.49■■□□□ 1.35
ABR-227ENST00000574266 TAF1LQ8IZX4 1826 aa23.48■■□□□ 1.35
ABR-227ENST00000574266 DIAPH1O60610 1272 aaKnown RBP23.47■■□□□ 1.35
ABR-227ENST00000574266 NFATC2IPQ8NCF5 419 aa23.47■■□□□ 1.35
ABR-227ENST00000574266 RFC4P35249 363 aa23.46■■□□□ 1.35
ABR-227ENST00000574266 CNGB1Q14028 1251 aaPredicted RBP23.46■■□□□ 1.35
ABR-227ENST00000574266 CHD4Q14839 1912 aa23.46■■□□□ 1.35
ABR-227ENST00000574266 COL24A1Q17RW2 1714 aa23.46■■□□□ 1.35
ABR-227ENST00000574266 AKAP4Q5JQC9 854 aa23.46■■□□□ 1.35
ABR-227ENST00000574266 RC3H1Q5TC82 1133 aaKnown RBP23.46■■□□□ 1.35
ABR-227ENST00000574266 ADRA2BP18089 450 aa23.45■■□□□ 1.34
ABR-227ENST00000574266 NLGN1Q8N2Q7 840 aa23.45■■□□□ 1.34
ABR-227ENST00000574266 PTCD1O75127 700 aaKnown RBP23.44■■□□□ 1.34
ABR-227ENST00000574266 SMIM5Q71RC9 77 aa23.43■■□□□ 1.34
ABR-227ENST00000574266 HMOX1P09601 288 aa23.42■■□□□ 1.34
ABR-227ENST00000574266 KDRP35968 1356 aa23.41■■□□□ 1.34
ABR-227ENST00000574266 PER1O15534 1290 aaPredicted RBP23.41■■□□□ 1.34
ABR-227ENST00000574266 UTRNP46939 3433 aa23.4■■□□□ 1.34
ABR-227ENST00000574266 RPS6KA4O75676 772 aa23.4■■□□□ 1.34
ABR-227ENST00000574266 AMIGO3Q86WK7 504 aa23.4■■□□□ 1.34
ABR-227ENST00000574266 CNTNAP4Q9C0A0 1308 aa23.39■■□□□ 1.34
ABR-227ENST00000574266 MMP10P09238 476 aa23.39■■□□□ 1.33
ABR-227ENST00000574266 YBX3P16989 372 aaKnown RBP eCLIP23.39■■□□□ 1.33
ABR-227ENST00000574266 U2SURPO15042 1029 aaKnown RBP23.38■■□□□ 1.33
ABR-227ENST00000574266 ARHGEF1Q92888 912 aaKnown RBP23.38■■□□□ 1.33
ABR-227ENST00000574266 CFAP53Q96M91 514 aa23.38■■□□□ 1.33
ABR-227ENST00000574266 PARP3Q9Y6F1 533 aa23.38■■□□□ 1.33
ABR-227ENST00000574266 KDM6AO15550 1401 aaPredicted RBP23.38■■□□□ 1.33
ABR-227ENST00000574266 UBR3Q6ZT12 1888 aa23.38■■□□□ 1.33
ABR-227ENST00000574266 SLC52A2Q9HAB3 445 aa23.37■■□□□ 1.33
ABR-227ENST00000574266 CCDC87Q9NVE4 849 aa23.37■■□□□ 1.33
ABR-227ENST00000574266 SLC4A9Q96Q91 983 aa23.36■■□□□ 1.33
ABR-227ENST00000574266 RNMTO43148 476 aaKnown RBP23.35■■□□□ 1.33
ABR-227ENST00000574266 GIGYF1O75420 1035 aaPredicted RBP23.34■■□□□ 1.33
ABR-227ENST00000574266 CRKLP46109 303 aaKnown RBP23.34■■□□□ 1.33
ABR-227ENST00000574266 NUDCQ9Y266 331 aa23.34■■□□□ 1.33
ABR-227ENST00000574266 NPC1L1Q9UHC9 1359 aa23.34■■□□□ 1.33
ABR-227ENST00000574266 TGFB2P61812 414 aa23.33■■□□□ 1.33
ABR-227ENST00000574266 MTHFSDQ2M296 383 aaKnown RBP23.33■■□□□ 1.33
ABR-227ENST00000574266 LGR6Q9HBX8 967 aa23.33■■□□□ 1.33
ABR-227ENST00000574266 ZPR1O75312 459 aa23.32■■□□□ 1.32
ABR-227ENST00000574266 TTC5Q8N0Z6 440 aa23.32■■□□□ 1.32
ABR-227ENST00000574266 GAS2L2Q8NHY3 880 aa23.32■■□□□ 1.32
ABR-227ENST00000574266 WWC3Q9ULE0 1092 aa23.31■■□□□ 1.32
ABR-227ENST00000574266 ZNF831Q5JPB2 1677 aa23.3■■□□□ 1.32
ABR-227ENST00000574266 GYS1P13807 737 aa23.3■■□□□ 1.32
ABR-227ENST00000574266 C1QTNF8P60827 252 aa23.29■■□□□ 1.32
ABR-227ENST00000574266 TEFQ10587 303 aa23.29■■□□□ 1.32
ABR-227ENST00000574266 GNAT3A8MTJ3 354 aa23.27■■□□□ 1.32
ABR-227ENST00000574266 SLC39A6Q13433 755 aa23.27■■□□□ 1.32
ABR-227ENST00000574266 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
ABR-227ENST00000574266 DNAJC10Q8IXB1 793 aa23.27■■□□□ 1.32
ABR-227ENST00000574266 GOLGB1Q14789 3259 aaKnown RBP23.27■■□□□ 1.31
ABR-227ENST00000574266 STARD3NLO95772 234 aa23.26■■□□□ 1.31
ABR-227ENST00000574266 VSIG10Q8N0Z9 540 aa23.26■■□□□ 1.31
ABR-227ENST00000574266 BCS1LQ9Y276 419 aa23.26■■□□□ 1.31
ABR-227ENST00000574266 GPBP1L1Q9HC44 474 aaPredicted RBP23.25■■□□□ 1.31
ABR-227ENST00000574266 SCN11AQ9UI33 1791 aa23.24■■□□□ 1.31
ABR-227ENST00000574266 SENP3-EIF4A1A0A087X0R7 540 aa23.24■■□□□ 1.31
ABR-227ENST00000574266 A0A0G2JLW4 131 aa23.24■■□□□ 1.31
ABR-227ENST00000574266 INTS5Q6P9B9 1019 aaKnown RBP23.24■■□□□ 1.31
ABR-227ENST00000574266 TEX13AQ9BXU3 409 aaPredicted RBP23.24■■□□□ 1.31
ABR-227ENST00000574266 USP42Q9H9J4 1324 aaKnown RBP23.23■■□□□ 1.31
ABR-227ENST00000574266 FCHSD2O94868 740 aa23.22■■□□□ 1.31
ABR-227ENST00000574266 NEFMP07197 916 aa23.22■■□□□ 1.31
ABR-227ENST00000574266 SRP68Q9UHB9 627 aaKnown RBP23.22■■□□□ 1.31
ABR-227ENST00000574266 COL5A3P25940 1745 aaPredicted RBP23.22■■□□□ 1.31
ABR-227ENST00000574266 A0A087WZG4 1122 aa23.21■■□□□ 1.31
ABR-227ENST00000574266 CYP19A1P11511 503 aaPredicted RBP23.21■■□□□ 1.31
ABR-227ENST00000574266 FKBP8Q14318 412 aa23.21■■□□□ 1.31
ABR-227ENST00000574266 ARHGAP27Q6ZUM4 889 aa23.21■■□□□ 1.31
ABR-227ENST00000574266 RTF1Q92541 710 aaKnown RBP23.21■■□□□ 1.31
ABR-227ENST00000574266 CICQ96RK0 1608 aaPredicted RBP23.2■■□□□ 1.3
ABR-227ENST00000574266 U2AF1L5P0DN76 240 aaPredicted RBP23.2■■□□□ 1.3
ABR-227ENST00000574266 DPEP1P16444 411 aa23.2■■□□□ 1.3
ABR-227ENST00000574266 U2AF1Q01081 240 aaKnown RBP eCLIP23.2■■□□□ 1.3
ABR-227ENST00000574266 USPL1Q5W0Q7 1092 aa23.2■■□□□ 1.3
ABR-227ENST00000574266 PIM2Q9P1W9 311 aa23.2■■□□□ 1.3
ABR-227ENST00000574266 ZNF526Q8TF50 670 aaPredicted RBP23.19■■□□□ 1.3
ABR-227ENST00000574266 ATP10DQ9P241 1426 aa23.18■■□□□ 1.3
ABR-227ENST00000574266 SOS1Q07889 1333 aaPredicted RBP23.18■■□□□ 1.3
ABR-227ENST00000574266 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
ABR-227ENST00000574266 PRKAR2BP31323 418 aa23.18■■□□□ 1.3
ABR-227ENST00000574266 NARFQ9UHQ1 456 aa23.18■■□□□ 1.3
ABR-227ENST00000574266 ZNF790Q6PG37 636 aa23.17■■□□□ 1.3
ABR-227ENST00000574266 MYH14Q7Z406 1995 aaKnown RBP23.16■■□□□ 1.3
ABR-227ENST00000574266 DALRD3Q5D0E6 543 aaKnown RBP23.16■■□□□ 1.3
ABR-227ENST00000574266 FMNL2Q96PY5 1086 aa23.16■■□□□ 1.3
ABR-227ENST00000574266 C10orf71Q711Q0 1435 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms