RNA–Protein interactions for RNA: ENST00000574210.5

CLUH-209, Transcript of clustered mitochondria homolog, humanhuman

TSL 1 (best)

Gene CLUH, Length 1,243 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUH-209ENST00000574210 CHD4Q14839 1912 aa23.76■■□□□ 1.39
CLUH-209ENST00000574210 SCN11AQ9UI33 1791 aa23.76■■□□□ 1.39
CLUH-209ENST00000574210 HSP90AB1P08238 724 aaKnown RBP23.76■■□□□ 1.39
CLUH-209ENST00000574210 MSH5O43196 834 aa23.75■■□□□ 1.39
CLUH-209ENST00000574210 CC2D1BQ5T0F9 858 aaKnown RBP23.75■■□□□ 1.39
CLUH-209ENST00000574210 FLAD1Q8NFF5 587 aa23.75■■□□□ 1.39
CLUH-209ENST00000574210 COL5A3P25940 1745 aaPredicted RBP23.75■■□□□ 1.39
CLUH-209ENST00000574210 MSL1Q68DK7 614 aa23.74■■□□□ 1.39
CLUH-209ENST00000574210 SMIM5Q71RC9 77 aa23.74■■□□□ 1.39
CLUH-209ENST00000574210 AK7Q96M32 723 aa23.74■■□□□ 1.39
CLUH-209ENST00000574210 SLC4A9Q96Q91 983 aa23.74■■□□□ 1.39
CLUH-209ENST00000574210 VIRMAQ69YN4 1812 aaKnown RBP23.74■■□□□ 1.39
CLUH-209ENST00000574210 COL3A1P02461 1466 aaPredicted RBP23.73■■□□□ 1.39
CLUH-209ENST00000574210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.71■■□□□ 1.39
CLUH-209ENST00000574210 ATP6V1AP38606 617 aa23.71■■□□□ 1.39
CLUH-209ENST00000574210 NLGN2Q8NFZ4 835 aa23.71■■□□□ 1.39
CLUH-209ENST00000574210 MYH14Q7Z406 1995 aaKnown RBP23.71■■□□□ 1.39
CLUH-209ENST00000574210 SSFA2P28290 1259 aa23.7■■□□□ 1.38
CLUH-209ENST00000574210 C1orf141Q5JVX7 400 aa23.69■■□□□ 1.38
CLUH-209ENST00000574210 KLHL34Q8N239 644 aa23.69■■□□□ 1.38
CLUH-209ENST00000574210 ADAMTS7Q9UKP4 1686 aa23.68■■□□□ 1.38
CLUH-209ENST00000574210 PHF14O94880 888 aa23.68■■□□□ 1.38
CLUH-209ENST00000574210 CICQ96RK0 1608 aaPredicted RBP23.68■■□□□ 1.38
CLUH-209ENST00000574210 CABP4P57796 275 aa23.67■■□□□ 1.38
CLUH-209ENST00000574210 GNPATO15228 680 aa23.66■■□□□ 1.38
CLUH-209ENST00000574210 HMOX1P09601 288 aa23.66■■□□□ 1.38
CLUH-209ENST00000574210 TJP1Q07157 1748 aa23.65■■□□□ 1.38
CLUH-209ENST00000574210 MRC1P22897 1456 aa23.65■■□□□ 1.38
CLUH-209ENST00000574210 DIAPH1O60610 1272 aaKnown RBP23.65■■□□□ 1.38
CLUH-209ENST00000574210 NFATC2IPQ8NCF5 419 aa23.65■■□□□ 1.38
CLUH-209ENST00000574210 AKAP4Q5JQC9 854 aa23.64■■□□□ 1.37
CLUH-209ENST00000574210 RBM42Q9BTD8 480 aaKnown RBP23.64■■□□□ 1.37
CLUH-209ENST00000574210 CNTNAP4Q9C0A0 1308 aa23.62■■□□□ 1.37
CLUH-209ENST00000574210 C4AP0C0L4 1744 aa23.62■■□□□ 1.37
CLUH-209ENST00000574210 GPR162Q16538 588 aa23.62■■□□□ 1.37
CLUH-209ENST00000574210 RC3H1Q5TC82 1133 aaKnown RBP23.62■■□□□ 1.37
CLUH-209ENST00000574210 LGR6Q9HBX8 967 aa23.61■■□□□ 1.37
CLUH-209ENST00000574210 CD2APQ9Y5K6 639 aa23.61■■□□□ 1.37
CLUH-209ENST00000574210 CNGB1Q14028 1251 aaPredicted RBP23.6■■□□□ 1.37
CLUH-209ENST00000574210 MTHFSDQ2M296 383 aaKnown RBP23.6■■□□□ 1.37
CLUH-209ENST00000574210 YBX3P16989 372 aaKnown RBP eCLIP23.59■■□□□ 1.37
CLUH-209ENST00000574210 PTCD1O75127 700 aaKnown RBP23.58■■□□□ 1.37
CLUH-209ENST00000574210 SLC52A2Q9HAB3 445 aa23.58■■□□□ 1.37
CLUH-209ENST00000574210 RTCBQ9Y3I0 505 aaKnown RBP23.58■■□□□ 1.37
CLUH-209ENST00000574210 KIF13BQ9NQT8 1826 aa23.58■■□□□ 1.37
CLUH-209ENST00000574210 RNMTO43148 476 aaKnown RBP23.57■■□□□ 1.36
CLUH-209ENST00000574210 UBR2Q8IWV8 1755 aa23.56■■□□□ 1.36
CLUH-209ENST00000574210 RPS6KA4O75676 772 aa23.56■■□□□ 1.36
CLUH-209ENST00000574210 ADRA2BP18089 450 aa23.56■■□□□ 1.36
CLUH-209ENST00000574210 TRAPPC3LQ5T215 181 aa23.56■■□□□ 1.36
CLUH-209ENST00000574210 ZNF784Q8NCA9 323 aaPredicted RBP23.56■■□□□ 1.36
CLUH-209ENST00000574210 KCPQ6ZWJ8 1503 aa23.55■■□□□ 1.36
CLUH-209ENST00000574210 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
CLUH-209ENST00000574210 ARHGEF1Q92888 912 aaKnown RBP23.55■■□□□ 1.36
CLUH-209ENST00000574210 KIAA1551Q9HCM1 1747 aa23.54■■□□□ 1.36
CLUH-209ENST00000574210 SIPA1L3O60292 1781 aaPredicted RBP23.54■■□□□ 1.36
CLUH-209ENST00000574210 CRKLP46109 303 aaKnown RBP23.53■■□□□ 1.36
CLUH-209ENST00000574210 U2SURPO15042 1029 aaKnown RBP23.52■■□□□ 1.36
CLUH-209ENST00000574210 MMP10P09238 476 aa23.52■■□□□ 1.36
CLUH-209ENST00000574210 GYS1P13807 737 aa23.51■■□□□ 1.35
CLUH-209ENST00000574210 SLC39A6Q13433 755 aa23.51■■□□□ 1.35
CLUH-209ENST00000574210 PPP2R1AP30153 589 aa23.5■■□□□ 1.35
CLUH-209ENST00000574210 INTS5Q6P9B9 1019 aaKnown RBP23.5■■□□□ 1.35
CLUH-209ENST00000574210 GRIN3BO60391 1043 aa23.49■■□□□ 1.35
CLUH-209ENST00000574210 DNAJC10Q8IXB1 793 aa23.49■■□□□ 1.35
CLUH-209ENST00000574210 NLGN1Q8N2Q7 840 aa23.49■■□□□ 1.35
CLUH-209ENST00000574210 RFC4P35249 363 aa23.48■■□□□ 1.35
CLUH-209ENST00000574210 IL17REQ8NFR9 667 aa23.47■■□□□ 1.35
CLUH-209ENST00000574210 GAS2L2Q8NHY3 880 aa23.47■■□□□ 1.35
CLUH-209ENST00000574210 RSPH6AQ9H0K4 717 aa23.47■■□□□ 1.35
CLUH-209ENST00000574210 C10orf71Q711Q0 1435 aa23.47■■□□□ 1.35
CLUH-209ENST00000574210 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
CLUH-209ENST00000574210 PXDNLA1KZ92 1463 aa23.46■■□□□ 1.35
CLUH-209ENST00000574210 PHACTR3Q96KR7 559 aa23.46■■□□□ 1.35
CLUH-209ENST00000574210 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
CLUH-209ENST00000574210 USP42Q9H9J4 1324 aaKnown RBP23.46■■□□□ 1.35
CLUH-209ENST00000574210 CYP19A1P11511 503 aaPredicted RBP23.45■■□□□ 1.34
CLUH-209ENST00000574210 SRP68Q9UHB9 627 aaKnown RBP23.45■■□□□ 1.34
CLUH-209ENST00000574210 BRCA1P38398 1863 aaKnown RBP23.45■■□□□ 1.34
CLUH-209ENST00000574210 CEMIPQ8WUJ3 1361 aa23.44■■□□□ 1.34
CLUH-209ENST00000574210 SOS1Q07889 1333 aaPredicted RBP23.44■■□□□ 1.34
CLUH-209ENST00000574210 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
CLUH-209ENST00000574210 CCDC87Q9NVE4 849 aa23.44■■□□□ 1.34
CLUH-209ENST00000574210 PRKAR2BP31323 418 aa23.43■■□□□ 1.34
CLUH-209ENST00000574210 VSIG10Q8N0Z9 540 aa23.43■■□□□ 1.34
CLUH-209ENST00000574210 FKBP8Q14318 412 aa23.42■■□□□ 1.34
CLUH-209ENST00000574210 WWC3Q9ULE0 1092 aa23.4■■□□□ 1.34
CLUH-209ENST00000574210 ZBTB1Q9Y2K1 713 aa23.4■■□□□ 1.34
CLUH-209ENST00000574210 DDR1Q08345 913 aa23.39■■□□□ 1.33
CLUH-209ENST00000574210 NUDCQ9Y266 331 aa23.39■■□□□ 1.33
CLUH-209ENST00000574210 TGFB2P61812 414 aa23.38■■□□□ 1.33
CLUH-209ENST00000574210 TEFQ10587 303 aa23.38■■□□□ 1.33
CLUH-209ENST00000574210 ZNF790Q6PG37 636 aa23.38■■□□□ 1.33
CLUH-209ENST00000574210 ZNF496Q96IT1 587 aaPredicted RBP23.38■■□□□ 1.33
CLUH-209ENST00000574210 PARP3Q9Y6F1 533 aa23.38■■□□□ 1.33
CLUH-209ENST00000574210 COL15A1P39059 1388 aa23.38■■□□□ 1.33
CLUH-209ENST00000574210 AFDNP55196 1824 aaKnown RBP23.38■■□□□ 1.33
CLUH-209ENST00000574210 U2AF1L5P0DN76 240 aaPredicted RBP23.37■■□□□ 1.33
CLUH-209ENST00000574210 U2AF1Q01081 240 aaKnown RBP eCLIP23.37■■□□□ 1.33
CLUH-209ENST00000574210 ADCY9O60503 1353 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms