RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.44
NDE1-209ENST00000574109 TRIM37O94972 964 aa17.77■□□□□ 0.44
NDE1-209ENST00000574109 SMARCC1Q92922 1105 aaPredicted RBP17.77■□□□□ 0.44
NDE1-209ENST00000574109 ACSBG1Q96GR2 724 aa17.77■□□□□ 0.44
NDE1-209ENST00000574109 PRIM1P49642 420 aaKnown RBP17.76■□□□□ 0.43
NDE1-209ENST00000574109 BABAM1Q9NWV8 329 aa17.76■□□□□ 0.43
NDE1-209ENST00000574109 RRP7AQ9Y3A4 280 aaKnown RBP17.76■□□□□ 0.43
NDE1-209ENST00000574109 C5P01031 1676 aa17.76■□□□□ 0.43
NDE1-209ENST00000574109 COL5A3P25940 1745 aaPredicted RBP17.75■□□□□ 0.43
NDE1-209ENST00000574109 NUP188Q5SRE5 1749 aa17.75■□□□□ 0.43
NDE1-209ENST00000574109 BAG6P46379 1132 aa17.75■□□□□ 0.43
NDE1-209ENST00000574109 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
NDE1-209ENST00000574109 MCM10Q7L590 875 aa17.75■□□□□ 0.43
NDE1-209ENST00000574109 IL17REQ8NFR9 667 aa17.75■□□□□ 0.43
NDE1-209ENST00000574109 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
NDE1-209ENST00000574109 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
NDE1-209ENST00000574109 PALLDQ8WX93 1383 aa17.74■□□□□ 0.43
NDE1-209ENST00000574109 IL16Q14005 1332 aa17.73■□□□□ 0.43
NDE1-209ENST00000574109 KCPQ6ZWJ8 1503 aa17.73■□□□□ 0.43
NDE1-209ENST00000574109 KCNQ2O43526 872 aa17.73■□□□□ 0.43
NDE1-209ENST00000574109 PIGBQ92521 554 aa17.73■□□□□ 0.43
NDE1-209ENST00000574109 TJP1Q07157 1748 aa17.72■□□□□ 0.43
NDE1-209ENST00000574109 PLSCR1O15162 318 aa17.72■□□□□ 0.43
NDE1-209ENST00000574109 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
NDE1-209ENST00000574109 DCTN1Q14203 1278 aa17.71■□□□□ 0.43
NDE1-209ENST00000574109 TAF7Q15545 349 aaPredicted RBP17.71■□□□□ 0.43
NDE1-209ENST00000574109 TTC5Q8N0Z6 440 aa17.71■□□□□ 0.43
NDE1-209ENST00000574109 UPF1Q92900 1129 aaKnown RBP eCLIP17.71■□□□□ 0.433e-10■□□□□ 8
NDE1-209ENST00000574109 QSER1Q2KHR3 1735 aa17.7■□□□□ 0.42
NDE1-209ENST00000574109 APBA3O96018 575 aa17.7■□□□□ 0.42
NDE1-209ENST00000574109 WDR63Q8IWG1 891 aa17.7■□□□□ 0.42
NDE1-209ENST00000574109 WWC1Q8IX03 1113 aa17.7■□□□□ 0.42
NDE1-209ENST00000574109 IFT57Q9NWB7 429 aa17.7■□□□□ 0.42
NDE1-209ENST00000574109 BTBD11A6QL63 1104 aa17.69■□□□□ 0.42
NDE1-209ENST00000574109 GNAI1P63096 354 aa17.69■□□□□ 0.42
NDE1-209ENST00000574109 SLC27A3Q5K4L6 730 aa17.68■□□□□ 0.42
NDE1-209ENST00000574109 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
NDE1-209ENST00000574109 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
NDE1-209ENST00000574109 ZNF521Q96K83 1311 aa17.68■□□□□ 0.42
NDE1-209ENST00000574109 C4BP0C0L5 1744 aa17.67■□□□□ 0.42
NDE1-209ENST00000574109 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
NDE1-209ENST00000574109 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
NDE1-209ENST00000574109 TSPYL4Q9UJ04 414 aa17.67■□□□□ 0.42
NDE1-209ENST00000574109 CACNA1FO60840 1977 aa17.66■□□□□ 0.42
NDE1-209ENST00000574109 HNRNPUQ00839 825 aaKnown RBP eCLIP17.66■□□□□ 0.42
NDE1-209ENST00000574109 VSIG10Q8N0Z9 540 aa17.66■□□□□ 0.42
NDE1-209ENST00000574109 ASAP1Q9ULH1 1129 aa17.66■□□□□ 0.42
NDE1-209ENST00000574109 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
NDE1-209ENST00000574109 PTF1AQ7RTS3 328 aa17.65■□□□□ 0.42
NDE1-209ENST00000574109 FMNL2Q96PY5 1086 aa17.65■□□□□ 0.42
NDE1-209ENST00000574109 HEG1Q9ULI3 1381 aa17.65■□□□□ 0.42
NDE1-209ENST00000574109 LOC102724428A0A0B4J2F2 783 aa17.64■□□□□ 0.41
NDE1-209ENST00000574109 CHL1O00533 1208 aa17.64■□□□□ 0.41
NDE1-209ENST00000574109 SOCS7O14512 581 aa17.64■□□□□ 0.41
NDE1-209ENST00000574109 SIK1P57059 783 aa17.64■□□□□ 0.41
NDE1-209ENST00000574109 MYH16Q9H6N6 1097 aa17.64■□□□□ 0.41
NDE1-209ENST00000574109 SOS1Q07889 1333 aaPredicted RBP17.64■□□□□ 0.41
NDE1-209ENST00000574109 TUBGCP6Q96RT7 1819 aa17.63■□□□□ 0.41
NDE1-209ENST00000574109 UBR3Q6ZT12 1888 aa17.63■□□□□ 0.41
NDE1-209ENST00000574109 ZNF853P0CG23 659 aa17.63■□□□□ 0.41
NDE1-209ENST00000574109 CAMKK2Q96RR4 588 aa17.63■□□□□ 0.41
NDE1-209ENST00000574109 CCNL1Q9UK58 526 aaPredicted RBP17.63■□□□□ 0.41
NDE1-209ENST00000574109 GOLGA2Q08379 1002 aa17.62■□□□□ 0.41
NDE1-209ENST00000574109 TXNRD1Q16881 649 aa17.62■□□□□ 0.41
NDE1-209ENST00000574109 TEX13AQ9BXU3 409 aaPredicted RBP17.62■□□□□ 0.41
NDE1-209ENST00000574109 E9PSI1 815 aa17.61■□□□□ 0.41
NDE1-209ENST00000574109 HOXB7P09629 217 aa17.61■□□□□ 0.41
NDE1-209ENST00000574109 SLC39A6Q13433 755 aa17.61■□□□□ 0.41
NDE1-209ENST00000574109 CHMP4AQ9BY43 222 aa17.61■□□□□ 0.41
NDE1-209ENST00000574109 SALL2Q9Y467 1007 aaPredicted RBP17.61■□□□□ 0.41
NDE1-209ENST00000574109 MYH14Q7Z406 1995 aaKnown RBP17.6■□□□□ 0.41
NDE1-209ENST00000574109 PTCD1O75127 700 aaKnown RBP17.6■□□□□ 0.41
NDE1-209ENST00000574109 EN1Q05925 392 aaPredicted RBP17.6■□□□□ 0.41
NDE1-209ENST00000574109 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
NDE1-209ENST00000574109 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
NDE1-209ENST00000574109 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
NDE1-209ENST00000574109 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
NDE1-209ENST00000574109 FANCIQ9NVI1 1328 aa17.59■□□□□ 0.41
NDE1-209ENST00000574109 SNRPA1P09661 255 aaKnown RBP17.59■□□□□ 0.41
NDE1-209ENST00000574109 ATP6V1AP38606 617 aa17.59■□□□□ 0.41
NDE1-209ENST00000574109 EIF4A1P60842 406 aaKnown RBP17.59■□□□□ 0.41
NDE1-209ENST00000574109 DEFB132Q7Z7B7 95 aa17.59■□□□□ 0.41
NDE1-209ENST00000574109 CNTNAP4Q9C0A0 1308 aa17.58■□□□□ 0.4
NDE1-209ENST00000574109 EZH2Q15910 746 aaKnown RBP17.58■□□□□ 0.4
NDE1-209ENST00000574109 C4AP0C0L4 1744 aa17.57■□□□□ 0.4
NDE1-209ENST00000574109 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
NDE1-209ENST00000574109 STARD3NLO95772 234 aa17.56■□□□□ 0.4
NDE1-209ENST00000574109 SENP3-EIF4A1A0A087X0R7 540 aa17.55■□□□□ 0.4
NDE1-209ENST00000574109 GIGYF1O75420 1035 aaPredicted RBP17.55■□□□□ 0.4
NDE1-209ENST00000574109 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
NDE1-209ENST00000574109 SCN7AQ01118 1682 aa17.55■□□□□ 0.4
NDE1-209ENST00000574109 BCORQ6W2J9 1755 aa17.54■□□□□ 0.4
NDE1-209ENST00000574109 KCNQ3O43525 872 aa17.54■□□□□ 0.4
NDE1-209ENST00000574109 RC3H1Q5TC82 1133 aaKnown RBP17.54■□□□□ 0.4
NDE1-209ENST00000574109 NBPF14Q5TI25 921 aa17.54■□□□□ 0.4
NDE1-209ENST00000574109 PROM2Q8N271 834 aa17.54■□□□□ 0.4
NDE1-209ENST00000574109 SLC4A9Q96Q91 983 aa17.54■□□□□ 0.4
NDE1-209ENST00000574109 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
NDE1-209ENST00000574109 SLFN5Q08AF3 891 aa17.53■□□□□ 0.4
NDE1-209ENST00000574109 ITPK1Q13572 414 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms