RNA–Protein interactions for RNA: ENST00000573391.1

STRA6-215, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 4

Gene STRA6, Length 566 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-215ENST00000573391 HSP90AB1P08238 724 aaKnown RBP26.68■■□□□ 1.86
STRA6-215ENST00000573391 ITPK1Q13572 414 aa26.68■■□□□ 1.86
STRA6-215ENST00000573391 SMIM5Q71RC9 77 aa26.68■■□□□ 1.86
STRA6-215ENST00000573391 SYT17Q9BSW7 474 aa26.68■■□□□ 1.86
STRA6-215ENST00000573391 MYH14Q7Z406 1995 aaKnown RBP26.67■■□□□ 1.86
STRA6-215ENST00000573391 ERVV-2B6SEH9 535 aa26.67■■□□□ 1.86
STRA6-215ENST00000573391 MSH5O43196 834 aa26.67■■□□□ 1.86
STRA6-215ENST00000573391 DIAPH1O60610 1272 aaKnown RBP26.67■■□□□ 1.86
STRA6-215ENST00000573391 MRC1P22897 1456 aa26.67■■□□□ 1.86
STRA6-215ENST00000573391 C4AP0C0L4 1744 aa26.66■■□□□ 1.86
STRA6-215ENST00000573391 C1orf141Q5JVX7 400 aa26.66■■□□□ 1.86
STRA6-215ENST00000573391 MAP3K5Q99683 1374 aa26.66■■□□□ 1.86
STRA6-215ENST00000573391 MSL1Q68DK7 614 aa26.65■■□□□ 1.86
STRA6-215ENST00000573391 AK7Q96M32 723 aa26.65■■□□□ 1.86
STRA6-215ENST00000573391 SLC4A9Q96Q91 983 aa26.65■■□□□ 1.86
STRA6-215ENST00000573391 UTRNP46939 3433 aa26.63■■□□□ 1.85
STRA6-215ENST00000573391 ATP6V1AP38606 617 aa26.63■■□□□ 1.85
STRA6-215ENST00000573391 SIPA1L3O60292 1781 aaPredicted RBP26.62■■□□□ 1.85
STRA6-215ENST00000573391 PHF14O94880 888 aa26.62■■□□□ 1.85
STRA6-215ENST00000573391 POLD1P28340 1107 aa26.62■■□□□ 1.85
STRA6-215ENST00000573391 CABP4P57796 275 aa26.62■■□□□ 1.85
STRA6-215ENST00000573391 UBR2Q8IWV8 1755 aa26.61■■□□□ 1.85
STRA6-215ENST00000573391 AKAP4Q5JQC9 854 aa26.6■■□□□ 1.85
STRA6-215ENST00000573391 KLHL34Q8N239 644 aa26.6■■□□□ 1.85
STRA6-215ENST00000573391 CHD4Q14839 1912 aa26.6■■□□□ 1.85
STRA6-215ENST00000573391 RBM42Q9BTD8 480 aaKnown RBP26.59■■□□□ 1.85
STRA6-215ENST00000573391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.58■■□□□ 1.85
STRA6-215ENST00000573391 MTHFSDQ2M296 383 aaKnown RBP26.58■■□□□ 1.85
STRA6-215ENST00000573391 NFATC2IPQ8NCF5 419 aa26.58■■□□□ 1.85
STRA6-215ENST00000573391 FLAD1Q8NFF5 587 aa26.58■■□□□ 1.85
STRA6-215ENST00000573391 GOLGB1Q14789 3259 aaKnown RBP26.57■■□□□ 1.84
STRA6-215ENST00000573391 U2SURPO15042 1029 aaKnown RBP26.57■■□□□ 1.84
STRA6-215ENST00000573391 GNPATO15228 680 aa26.57■■□□□ 1.84
STRA6-215ENST00000573391 LGR6Q9HBX8 967 aa26.57■■□□□ 1.84
STRA6-215ENST00000573391 HMGB2P26583 209 aaKnown RBP26.56■■□□□ 1.84
STRA6-215ENST00000573391 SSFA2P28290 1259 aa26.56■■□□□ 1.84
STRA6-215ENST00000573391 KCPQ6ZWJ8 1503 aa26.55■■□□□ 1.84
STRA6-215ENST00000573391 PPP2R1AP30153 589 aa26.54■■□□□ 1.84
STRA6-215ENST00000573391 NLGN2Q8NFZ4 835 aa26.54■■□□□ 1.84
STRA6-215ENST00000573391 RNMTO43148 476 aaKnown RBP26.53■■□□□ 1.84
STRA6-215ENST00000573391 PTCD1O75127 700 aaKnown RBP26.53■■□□□ 1.84
STRA6-215ENST00000573391 SLC52A2Q9HAB3 445 aa26.53■■□□□ 1.84
STRA6-215ENST00000573391 DCAF8L1A6NGE4 600 aa26.52■■□□□ 1.84
STRA6-215ENST00000573391 CNTNAP4Q9C0A0 1308 aa26.51■■□□□ 1.83
STRA6-215ENST00000573391 KIF13BQ9NQT8 1826 aa26.49■■□□□ 1.83
STRA6-215ENST00000573391 KIAA1551Q9HCM1 1747 aa26.49■■□□□ 1.83
STRA6-215ENST00000573391 DLG5Q8TDM6 1919 aa26.48■■□□□ 1.83
STRA6-215ENST00000573391 YY1P25490 414 aa26.48■■□□□ 1.83
STRA6-215ENST00000573391 CFAP53Q96M91 514 aa26.48■■□□□ 1.83
STRA6-215ENST00000573391 SLC39A6Q13433 755 aa26.47■■□□□ 1.83
STRA6-215ENST00000573391 RSPH6AQ9H0K4 717 aa26.47■■□□□ 1.83
STRA6-215ENST00000573391 RTCBQ9Y3I0 505 aaKnown RBP26.46■■□□□ 1.83
STRA6-215ENST00000573391 PRKAR2BP31323 418 aa26.45■■□□□ 1.82
STRA6-215ENST00000573391 RC3H1Q5TC82 1133 aaKnown RBP26.45■■□□□ 1.82
STRA6-215ENST00000573391 CRKLP46109 303 aaKnown RBP26.44■■□□□ 1.82
STRA6-215ENST00000573391 PHACTR3Q96KR7 559 aa26.44■■□□□ 1.82
STRA6-215ENST00000573391 N4BP2Q86UW6 1770 aaPredicted RBP26.43■■□□□ 1.82
STRA6-215ENST00000573391 RPS6KA4O75676 772 aa26.42■■□□□ 1.82
STRA6-215ENST00000573391 GAS2L2Q8NHY3 880 aa26.42■■□□□ 1.82
STRA6-215ENST00000573391 ARHGEF1Q92888 912 aaKnown RBP26.42■■□□□ 1.82
STRA6-215ENST00000573391 TRAPPC3LQ5T215 181 aa26.41■■□□□ 1.82
STRA6-215ENST00000573391 DNAJC10Q8IXB1 793 aa26.41■■□□□ 1.82
STRA6-215ENST00000573391 PELP1Q8IZL8 1130 aaKnown RBP26.4■■□□□ 1.82
STRA6-215ENST00000573391 IL17REQ8NFR9 667 aa26.4■■□□□ 1.82
STRA6-215ENST00000573391 GNAT3A8MTJ3 354 aa26.39■■□□□ 1.82
STRA6-215ENST00000573391 U2AF1L5P0DN76 240 aaPredicted RBP26.39■■□□□ 1.82
STRA6-215ENST00000573391 ADRA2BP18089 450 aa26.39■■□□□ 1.82
STRA6-215ENST00000573391 U2AF1Q01081 240 aaKnown RBP eCLIP26.39■■□□□ 1.82
STRA6-215ENST00000573391 GPR162Q16538 588 aa26.39■■□□□ 1.82
STRA6-215ENST00000573391 CEMIPQ8WUJ3 1361 aa26.38■■□□□ 1.81
STRA6-215ENST00000573391 NUDCQ9Y266 331 aa26.38■■□□□ 1.81
STRA6-215ENST00000573391 CD2APQ9Y5K6 639 aa26.38■■□□□ 1.81
STRA6-215ENST00000573391 BRCA1P38398 1863 aaKnown RBP26.38■■□□□ 1.81
STRA6-215ENST00000573391 MMP10P09238 476 aa26.37■■□□□ 1.81
STRA6-215ENST00000573391 YBX3P16989 372 aaKnown RBP eCLIP26.37■■□□□ 1.81
STRA6-215ENST00000573391 INTS5Q6P9B9 1019 aaKnown RBP26.37■■□□□ 1.81
STRA6-215ENST00000573391 GYS1P13807 737 aa26.36■■□□□ 1.81
STRA6-215ENST00000573391 AFDNP55196 1824 aaKnown RBP26.35■■□□□ 1.81
STRA6-215ENST00000573391 SRP68Q9UHB9 627 aaKnown RBP26.35■■□□□ 1.81
STRA6-215ENST00000573391 CYP19A1P11511 503 aaPredicted RBP26.34■■□□□ 1.81
STRA6-215ENST00000573391 RFC4P35249 363 aa26.34■■□□□ 1.81
STRA6-215ENST00000573391 CCDC87Q9NVE4 849 aa26.34■■□□□ 1.81
STRA6-215ENST00000573391 C10orf71Q711Q0 1435 aa26.33■■□□□ 1.81
STRA6-215ENST00000573391 TEFQ10587 303 aa26.33■■□□□ 1.81
STRA6-215ENST00000573391 SCN7AQ01118 1682 aa26.33■■□□□ 1.81
STRA6-215ENST00000573391 USP42Q9H9J4 1324 aaKnown RBP26.33■■□□□ 1.81
STRA6-215ENST00000573391 ZBTB1Q9Y2K1 713 aa26.32■■□□□ 1.8
STRA6-215ENST00000573391 SOS1Q07889 1333 aaPredicted RBP26.32■■□□□ 1.8
STRA6-215ENST00000573391 PXDNLA1KZ92 1463 aa26.31■■□□□ 1.8
STRA6-215ENST00000573391 FCHSD2O94868 740 aa26.31■■□□□ 1.8
STRA6-215ENST00000573391 TTC5Q8N0Z6 440 aa26.3■■□□□ 1.8
STRA6-215ENST00000573391 NLGN1Q8N2Q7 840 aa26.3■■□□□ 1.8
STRA6-215ENST00000573391 ZNF496Q96IT1 587 aaPredicted RBP26.3■■□□□ 1.8
STRA6-215ENST00000573391 WWC3Q9ULE0 1092 aa26.3■■□□□ 1.8
STRA6-215ENST00000573391 COL15A1P39059 1388 aa26.3■■□□□ 1.8
STRA6-215ENST00000573391 KDM3BQ7LBC6 1761 aa26.3■■□□□ 1.8
STRA6-215ENST00000573391 DDX10Q13206 875 aaKnown RBP26.29■■□□□ 1.8
STRA6-215ENST00000573391 ZNF790Q6PG37 636 aa26.29■■□□□ 1.8
STRA6-215ENST00000573391 VSIG10Q8N0Z9 540 aa26.29■■□□□ 1.8
STRA6-215ENST00000573391 HEG1Q9ULI3 1381 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms