RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 FCHSD2O94868 740 aa17.11■□□□□ 0.33
SMIM28-201ENST00000573100 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
SMIM28-201ENST00000573100 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
SMIM28-201ENST00000573100 PXDNLA1KZ92 1463 aa17.11■□□□□ 0.33
SMIM28-201ENST00000573100 DPEP1P16444 411 aa17.1■□□□□ 0.33
SMIM28-201ENST00000573100 RBM46Q8TBY0 533 aaKnown RBP17.1■□□□□ 0.33
SMIM28-201ENST00000573100 CCDC87Q9NVE4 849 aa17.1■□□□□ 0.33
SMIM28-201ENST00000573100 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
SMIM28-201ENST00000573100 PHKG2P15735 406 aa17.09■□□□□ 0.33
SMIM28-201ENST00000573100 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
SMIM28-201ENST00000573100 C16orf71Q8IYS4 520 aaPredicted RBP17.09■□□□□ 0.33
SMIM28-201ENST00000573100 EYA1Q99502 592 aa17.09■□□□□ 0.33
SMIM28-201ENST00000573100 MAP2P11137 1827 aaKnown RBP17.09■□□□□ 0.33
SMIM28-201ENST00000573100 WASHC2AQ641Q2 1341 aa17.08■□□□□ 0.32
SMIM28-201ENST00000573100 ARHGEF1Q92888 912 aaKnown RBP17.08■□□□□ 0.32
SMIM28-201ENST00000573100 CARD14Q9BXL6 1004 aa17.08■□□□□ 0.32
SMIM28-201ENST00000573100 NCAPD2Q15021 1401 aa17.07■□□□□ 0.32
SMIM28-201ENST00000573100 ADRA2BP18089 450 aa17.07■□□□□ 0.32
SMIM28-201ENST00000573100 RFC4P35249 363 aa17.07■□□□□ 0.32
SMIM28-201ENST00000573100 RC3H1Q5TC82 1133 aaKnown RBP17.07■□□□□ 0.32
SMIM28-201ENST00000573100 C9orf131Q5VYM1 1079 aa17.07■□□□□ 0.32
SMIM28-201ENST00000573100 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
SMIM28-201ENST00000573100 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
SMIM28-201ENST00000573100 KLRG1Q96E93 195 aa17.06■□□□□ 0.32
SMIM28-201ENST00000573100 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
SMIM28-201ENST00000573100 C10orf71Q711Q0 1435 aa17.05■□□□□ 0.32
SMIM28-201ENST00000573100 GYS1P13807 737 aa17.05■□□□□ 0.32
SMIM28-201ENST00000573100 HTRA3P83110 453 aa17.05■□□□□ 0.32
SMIM28-201ENST00000573100 FSTL1Q12841 308 aa17.05■□□□□ 0.32
SMIM28-201ENST00000573100 SLC4A9Q96Q91 983 aa17.05■□□□□ 0.32
SMIM28-201ENST00000573100 PIM2Q9P1W9 311 aa17.05■□□□□ 0.32
SMIM28-201ENST00000573100 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
SMIM28-201ENST00000573100 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
SMIM28-201ENST00000573100 KCNA3P22001 575 aa17.04■□□□□ 0.32
SMIM28-201ENST00000573100 COL13A1Q5TAT6 717 aaPredicted RBP17.04■□□□□ 0.32
SMIM28-201ENST00000573100 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
SMIM28-201ENST00000573100 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
SMIM28-201ENST00000573100 DALRD3Q5D0E6 543 aaKnown RBP17.03■□□□□ 0.32
SMIM28-201ENST00000573100 JMYQ8N9B5 988 aa17.03■□□□□ 0.32
SMIM28-201ENST00000573100 KIF13BQ9NQT8 1826 aa17.03■□□□□ 0.32
SMIM28-201ENST00000573100 CNTNAP4Q9C0A0 1308 aa17.02■□□□□ 0.32
SMIM28-201ENST00000573100 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
SMIM28-201ENST00000573100 KDRP35968 1356 aa17.02■□□□□ 0.31
SMIM28-201ENST00000573100 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.31
SMIM28-201ENST00000573100 PCNTO95613 3336 aa17.01■□□□□ 0.31
SMIM28-201ENST00000573100 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
SMIM28-201ENST00000573100 DCAF5Q96JK2 942 aa17.01■□□□□ 0.31
SMIM28-201ENST00000573100 RRAGCQ9HB90 399 aa17.01■□□□□ 0.31
SMIM28-201ENST00000573100 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
SMIM28-201ENST00000573100 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
SMIM28-201ENST00000573100 RNF181Q9P0P0 153 aa17■□□□□ 0.31
SMIM28-201ENST00000573100 CABP4P57796 275 aa16.99■□□□□ 0.31
SMIM28-201ENST00000573100 EIF4A2Q14240 407 aaKnown RBP16.99■□□□□ 0.31
SMIM28-201ENST00000573100 CAPN15O75808 1086 aa16.98■□□□□ 0.31
SMIM28-201ENST00000573100 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
SMIM28-201ENST00000573100 C4AP0C0L4 1744 aa16.98■□□□□ 0.31
SMIM28-201ENST00000573100 WDR90Q96KV7 1748 aa16.97■□□□□ 0.31
SMIM28-201ENST00000573100 PTCD1O75127 700 aaKnown RBP16.97■□□□□ 0.31
SMIM28-201ENST00000573100 FKBP8Q14318 412 aa16.97■□□□□ 0.31
SMIM28-201ENST00000573100 TNS4Q8IZW8 715 aa16.97■□□□□ 0.31
SMIM28-201ENST00000573100 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.31
SMIM28-201ENST00000573100 CHRNA5P30532 468 aa16.96■□□□□ 0.31
SMIM28-201ENST00000573100 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
SMIM28-201ENST00000573100 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.31
SMIM28-201ENST00000573100 SRP68Q9UHB9 627 aaKnown RBP16.96■□□□□ 0.31
SMIM28-201ENST00000573100 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
SMIM28-201ENST00000573100 MTHFSP49914 203 aa16.95■□□□□ 0.3
SMIM28-201ENST00000573100 DDR1Q08345 913 aa16.95■□□□□ 0.3
SMIM28-201ENST00000573100 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
SMIM28-201ENST00000573100 AMOTQ4VCS5 1084 aa16.94■□□□□ 0.3
SMIM28-201ENST00000573100 USP42Q9H9J4 1324 aaKnown RBP16.94■□□□□ 0.3
SMIM28-201ENST00000573100 PRELPP51888 382 aa16.93■□□□□ 0.3
SMIM28-201ENST00000573100 NFATC2IPQ8NCF5 419 aa16.93■□□□□ 0.3
SMIM28-201ENST00000573100 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
SMIM28-201ENST00000573100 ZNF831Q5JPB2 1677 aa16.92■□□□□ 0.3
SMIM28-201ENST00000573100 ARFGEF1Q9Y6D6 1849 aa16.92■□□□□ 0.3
SMIM28-201ENST00000573100 MYH14Q7Z406 1995 aaKnown RBP16.92■□□□□ 0.3
SMIM28-201ENST00000573100 TM4SF1P30408 202 aa16.92■□□□□ 0.3
SMIM28-201ENST00000573100 ANKRD26Q9UPS8 1709 aa16.91■□□□□ 0.3
SMIM28-201ENST00000573100 POLRMTO00411 1230 aaKnown RBP16.91■□□□□ 0.3
SMIM28-201ENST00000573100 ZPR1O75312 459 aa16.91■□□□□ 0.3
SMIM28-201ENST00000573100 VEGFAP15692 232 aaPredicted RBP16.91■□□□□ 0.3
SMIM28-201ENST00000573100 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
SMIM28-201ENST00000573100 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
SMIM28-201ENST00000573100 KDM6AO15550 1401 aaPredicted RBP16.9■□□□□ 0.3
SMIM28-201ENST00000573100 INTS5Q6P9B9 1019 aaKnown RBP16.9■□□□□ 0.3
SMIM28-201ENST00000573100 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
SMIM28-201ENST00000573100 GLTPD2A6NH11 291 aa16.89■□□□□ 0.29
SMIM28-201ENST00000573100 LMNB1P20700 586 aa16.89■□□□□ 0.29
SMIM28-201ENST00000573100 RASSF7Q02833 373 aa16.88■□□□□ 0.29
SMIM28-201ENST00000573100 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
SMIM28-201ENST00000573100 HSPA1AP0DMV8 641 aaKnown RBP16.87■□□□□ 0.29
SMIM28-201ENST00000573100 HSPA1BP0DMV9 641 aaKnown RBP16.87■□□□□ 0.29
SMIM28-201ENST00000573100 POLR3GLQ9BT43 218 aa16.87■□□□□ 0.29
SMIM28-201ENST00000573100 AEBP1Q8IUX7 1158 aa16.86■□□□□ 0.29
SMIM28-201ENST00000573100 SBF1O95248 1867 aa16.86■□□□□ 0.29
SMIM28-201ENST00000573100 NFIXQ14938 502 aa16.85■□□□□ 0.29
SMIM28-201ENST00000573100 DNAJC10Q8IXB1 793 aa16.85■□□□□ 0.29
SMIM28-201ENST00000573100 TTLL6Q8N841 843 aa16.85■□□□□ 0.29
SMIM28-201ENST00000573100 TNRC6CQ9HCJ0 1690 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms