RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 FERP16591 822 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 LMAN1P49257 510 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 BICD1Q96G01 975 aa11.04□□□□□ -0.64
USP6-204ENST00000572949 CTCFLQ8NI51 663 aaPredicted RBP11.03□□□□□ -0.64
USP6-204ENST00000572949 TSNARE1Q96NA8 513 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 TNMDQ9H2S6 317 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 UBAP1LF5GYI3 381 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 TTC21AQ8NDW8 1320 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 RTEL1-TNFRSF6BF6WH68 1400 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 SRGAP3O43295 1099 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 MAP3K12Q12852 859 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 PLS1Q14651 629 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 BLOC1S2Q6QNY1 142 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 CACNA2D4Q7Z3S7 1137 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 SYCP3Q8IZU3 236 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 CCDC113Q9H0I3 377 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 FGFR1OPO95684 399 aaKnown RBP11.03□□□□□ -0.64
USP6-204ENST00000572949 IFIT5Q13325 482 aaKnown RBP11.03□□□□□ -0.64
USP6-204ENST00000572949 TRMT112Q9UI30 125 aaKnown RBP11.03□□□□□ -0.64
USP6-204ENST00000572949 SPC24Q8NBT2 197 aa11.03□□□□□ -0.64
USP6-204ENST00000572949 AAMPQ13685 434 aa11.02□□□□□ -0.65
USP6-204ENST00000572949 CCDC117Q8IWD4 279 aaPredicted RBP11.02□□□□□ -0.65
USP6-204ENST00000572949 CFAP45Q9UL16 551 aa11.02□□□□□ -0.65
USP6-204ENST00000572949 MAP2K1Q02750 393 aaPredicted RBP11.02□□□□□ -0.65
USP6-204ENST00000572949 CCDC196A0A1B0GTZ2 297 aa11.02□□□□□ -0.65
USP6-204ENST00000572949 NLRP5P59047 1200 aa11.02□□□□□ -0.65
USP6-204ENST00000572949 FKBP15Q5T1M5 1219 aa11.02□□□□□ -0.65
USP6-204ENST00000572949 LARP1BQ659C4 914 aaKnown RBP11.02□□□□□ -0.65
USP6-204ENST00000572949 BIRC2Q13490 618 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 SYNCQ9H7C4 482 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 BAG3O95817 575 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 GSE1Q14687 1217 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 TSPY26PQ9H489 355 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 CABP1Q9NZU7 370 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 ANKRD18BA2A2Z9 1011 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 KRT32Q14532 448 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 PUS7Q96PZ0 661 aaKnown RBP11.01□□□□□ -0.65
USP6-204ENST00000572949 UQCRHP07919 91 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 USP8P40818 1118 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 NASPP49321 788 aaPredicted RBP11.01□□□□□ -0.65
USP6-204ENST00000572949 SPA17Q15506 151 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 STXBP4Q6ZWJ1 553 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 MYOM3Q5VTT5 1437 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 B4DLN1 442 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 TOM1O60784 492 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 MRPL12P52815 198 aaKnown RBP11.01□□□□□ -0.65
USP6-204ENST00000572949 GOPCQ9HD26 462 aa11.01□□□□□ -0.65
USP6-204ENST00000572949 SLU7O95391 586 aaKnown RBP11□□□□□ -0.65
USP6-204ENST00000572949 MBD3O95983 291 aa11□□□□□ -0.65
USP6-204ENST00000572949 KRT85P78386 507 aa11□□□□□ -0.65
USP6-204ENST00000572949 GNAT3A8MTJ3 354 aa11□□□□□ -0.65
USP6-204ENST00000572949 CCDC192P0DO97 292 aa11□□□□□ -0.65
USP6-204ENST00000572949 U3KPZ7 1027 aaPredicted RBP11□□□□□ -0.65
USP6-204ENST00000572949 CWC27Q6UX04 472 aaKnown RBP11□□□□□ -0.65
USP6-204ENST00000572949 LRPPRCP42704 1394 aaKnown RBP11□□□□□ -0.65
USP6-204ENST00000572949 KIF20AO95235 890 aa11□□□□□ -0.65
USP6-204ENST00000572949 CAVIN1Q6NZI2 390 aaKnown RBP11□□□□□ -0.65
USP6-204ENST00000572949 SMC1AQ14683 1233 aaKnown RBP11□□□□□ -0.65
USP6-204ENST00000572949 GAPVD1Q14C86 1478 aa11□□□□□ -0.65
USP6-204ENST00000572949 AFAP1Q8N556 730 aa11□□□□□ -0.65
USP6-204ENST00000572949 CDC5LQ99459 802 aaKnown RBP11□□□□□ -0.65
USP6-204ENST00000572949 UQCRHLA0A096LP55 91 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 ERLIN1O75477 346 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP6-204ENST00000572949 TNNT1P13805 278 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 OTUD6BQ8N6M0 293 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 CCDC178Q5BJE1 867 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 CCDC174Q6PII3 467 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 RAB3IL1Q8TBN0 382 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 RSPH6AQ9H0K4 717 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 WWC3Q9ULE0 1092 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 A0A087WZG4 1122 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 EIF3JO75822 258 aaKnown RBP10.99□□□□□ -0.65
USP6-204ENST00000572949 UBE4AQ14139 1066 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 NOB1Q9ULX3 412 aaKnown RBP10.99□□□□□ -0.65
USP6-204ENST00000572949 LDHCP07864 332 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 VAT1LQ9HCJ6 419 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
USP6-204ENST00000572949 ACTN2P35609 894 aa10.98□□□□□ -0.65
USP6-204ENST00000572949 JDP2Q8WYK2 163 aa10.98□□□□□ -0.65
USP6-204ENST00000572949 SPTY2D1Q68D10 685 aaPredicted RBP10.98□□□□□ -0.65
USP6-204ENST00000572949 CATIPQ7Z7H3 387 aa10.98□□□□□ -0.65
USP6-204ENST00000572949 CCDC148Q8NFR7 591 aa10.98□□□□□ -0.65
USP6-204ENST00000572949 RRS1Q15050 365 aaKnown RBP10.98□□□□□ -0.65
USP6-204ENST00000572949 GCC1Q96CN9 775 aa10.98□□□□□ -0.65
USP6-204ENST00000572949 CCDC12Q8WUD4 166 aaPredicted RBP10.98□□□□□ -0.65
USP6-204ENST00000572949 KIF4AO95239 1232 aa10.98□□□□□ -0.65
USP6-204ENST00000572949 TCP11L2Q8N4U5 519 aa10.98□□□□□ -0.65
USP6-204ENST00000572949 CCDC194A0A1B0GVG4 234 aa10.98□□□□□ -0.65
USP6-204ENST00000572949 PRPF40AO75400 957 aaKnown RBP10.98□□□□□ -0.65
USP6-204ENST00000572949 ZBTB24O43167 697 aaPredicted RBP10.97□□□□□ -0.65
USP6-204ENST00000572949 SPATA32Q96LK8 384 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 SH3BP5O60239 455 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 PPP1R42Q7Z4L9 355 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 PDRG1Q9NUG6 133 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 SLC4A8Q2Y0W8 1093 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 CFAP70Q5T0N1 1121 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 NBPF6Q5VWK0 638 aa10.97□□□□□ -0.65
USP6-204ENST00000572949 NBPF5PQ86XG9 351 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms