RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 NLGN1Q8N2Q7 840 aa14.32□□□□□ -0.12
CHMP6-203ENST00000572525 LINC00116Q8NCU8 138 aa14.32□□□□□ -0.12
CHMP6-203ENST00000572525 PIGBQ92521 554 aa14.32□□□□□ -0.12
CHMP6-203ENST00000572525 CARD11Q9BXL7 1154 aa14.32□□□□□ -0.12
CHMP6-203ENST00000572525 BCS1LQ9Y276 419 aa14.32□□□□□ -0.12
CHMP6-203ENST00000572525 ZC3H4Q9UPT8 1303 aaKnown RBP14.32□□□□□ -0.12
CHMP6-203ENST00000572525 ADRA2BP18089 450 aa14.31□□□□□ -0.12
CHMP6-203ENST00000572525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHMP6-203ENST00000572525 WWC3Q9ULE0 1092 aa14.31□□□□□ -0.12
CHMP6-203ENST00000572525 DLEC1Q9Y238 1755 aa14.3□□□□□ -0.12
CHMP6-203ENST00000572525 GNPATO15228 680 aa14.3□□□□□ -0.12
CHMP6-203ENST00000572525 ARHGAP27Q6ZUM4 889 aa14.3□□□□□ -0.12
CHMP6-203ENST00000572525 USHBP1Q8N6Y0 703 aa14.3□□□□□ -0.12
CHMP6-203ENST00000572525 KDRP35968 1356 aa14.3□□□□□ -0.12
CHMP6-203ENST00000572525 KCPQ6ZWJ8 1503 aa14.3□□□□□ -0.12
CHMP6-203ENST00000572525 DICER1Q9UPY3 1922 aaKnown RBP14.29□□□□□ -0.12
CHMP6-203ENST00000572525 CCDC87Q9NVE4 849 aa14.29□□□□□ -0.12
CHMP6-203ENST00000572525 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
CHMP6-203ENST00000572525 FCHSD2O94868 740 aa14.28□□□□□ -0.12
CHMP6-203ENST00000572525 TMF1P82094 1093 aa14.28□□□□□ -0.12
CHMP6-203ENST00000572525 RRS1Q15050 365 aaKnown RBP14.28□□□□□ -0.12
CHMP6-203ENST00000572525 RC3H1Q5TC82 1133 aaKnown RBP14.28□□□□□ -0.12
CHMP6-203ENST00000572525 C9orf131Q5VYM1 1079 aa14.28□□□□□ -0.12
CHMP6-203ENST00000572525 SMC1BQ8NDV3 1235 aa14.28□□□□□ -0.12
CHMP6-203ENST00000572525 TIAM2Q8IVF5 1701 aa14.27□□□□□ -0.12
CHMP6-203ENST00000572525 A0A0G2JLW4 131 aa14.27□□□□□ -0.13
CHMP6-203ENST00000572525 FYB1O15117 783 aa14.27□□□□□ -0.13
CHMP6-203ENST00000572525 FBLN1P23142 703 aa14.27□□□□□ -0.13
CHMP6-203ENST00000572525 ITPK1Q13572 414 aa14.27□□□□□ -0.13
CHMP6-203ENST00000572525 DCAF5Q96JK2 942 aa14.27□□□□□ -0.13
CHMP6-203ENST00000572525 TMOD3Q9NYL9 352 aa14.27□□□□□ -0.13
CHMP6-203ENST00000572525 SPG7Q9UQ90 795 aa14.27□□□□□ -0.13
CHMP6-203ENST00000572525 RTCBQ9Y3I0 505 aaKnown RBP14.27□□□□□ -0.13
CHMP6-203ENST00000572525 KDM6AO15550 1401 aaPredicted RBP14.26□□□□□ -0.13
CHMP6-203ENST00000572525 CNTNAP4Q9C0A0 1308 aa14.26□□□□□ -0.13
CHMP6-203ENST00000572525 DPEP1P16444 411 aa14.26□□□□□ -0.13
CHMP6-203ENST00000572525 KCNA3P22001 575 aa14.26□□□□□ -0.13
CHMP6-203ENST00000572525 ATP6V1AP38606 617 aa14.26□□□□□ -0.13
CHMP6-203ENST00000572525 HSP90AB2PQ58FF8 381 aa14.26□□□□□ -0.13
CHMP6-203ENST00000572525 TRAPPC3LQ5T215 181 aa14.26□□□□□ -0.13
CHMP6-203ENST00000572525 SMIM5Q71RC9 77 aa14.26□□□□□ -0.13
CHMP6-203ENST00000572525 TESK2Q96S53 571 aa14.26□□□□□ -0.13
CHMP6-203ENST00000572525 SIN3AQ96ST3 1273 aa14.26□□□□□ -0.13
CHMP6-203ENST00000572525 CAPN15O75808 1086 aa14.25□□□□□ -0.13
CHMP6-203ENST00000572525 HTRA3P83110 453 aa14.25□□□□□ -0.13
CHMP6-203ENST00000572525 PIM2Q9P1W9 311 aa14.25□□□□□ -0.13
CHMP6-203ENST00000572525 AFDNP55196 1824 aaKnown RBP14.25□□□□□ -0.13
CHMP6-203ENST00000572525 GYS1P13807 737 aa14.24□□□□□ -0.13
CHMP6-203ENST00000572525 NRXN2Q9P2S2 1712 aa14.24□□□□□ -0.13
CHMP6-203ENST00000572525 ADAMTS7Q9UKP4 1686 aa14.23□□□□□ -0.13
CHMP6-203ENST00000572525 ASAP1Q9ULH1 1129 aa14.23□□□□□ -0.13
CHMP6-203ENST00000572525 PARP3Q9Y6F1 533 aa14.23□□□□□ -0.13
CHMP6-203ENST00000572525 RPS6KA4O75676 772 aa14.22□□□□□ -0.13
CHMP6-203ENST00000572525 HSPA1AP0DMV8 641 aaKnown RBP14.22□□□□□ -0.13
CHMP6-203ENST00000572525 HSPA1BP0DMV9 641 aaKnown RBP14.22□□□□□ -0.13
CHMP6-203ENST00000572525 DALRD3Q5D0E6 543 aaKnown RBP14.22□□□□□ -0.13
CHMP6-203ENST00000572525 IFNL2Q8IZJ0 200 aa14.22□□□□□ -0.13
CHMP6-203ENST00000572525 GGNBP2Q9H3C7 697 aa14.22□□□□□ -0.13
CHMP6-203ENST00000572525 ATG3Q9NT62 314 aa14.22□□□□□ -0.13
CHMP6-203ENST00000572525 RNF181Q9P0P0 153 aa14.22□□□□□ -0.13
CHMP6-203ENST00000572525 SLC34A2O95436 690 aa14.21□□□□□ -0.13
CHMP6-203ENST00000572525 ARHGEF1Q92888 912 aaKnown RBP14.21□□□□□ -0.13
CHMP6-203ENST00000572525 RRAGCQ9HB90 399 aa14.21□□□□□ -0.13
CHMP6-203ENST00000572525 TJP1Q07157 1748 aa14.21□□□□□ -0.14
CHMP6-203ENST00000572525 PHKG2P15735 406 aa14.2□□□□□ -0.14
CHMP6-203ENST00000572525 RFC4P35249 363 aa14.2□□□□□ -0.14
CHMP6-203ENST00000572525 ERVV-2B6SEH9 535 aa14.19□□□□□ -0.14
CHMP6-203ENST00000572525 VEGFAP15692 232 aaPredicted RBP14.19□□□□□ -0.14
CHMP6-203ENST00000572525 NEUROD1Q13562 356 aa14.19□□□□□ -0.14
CHMP6-203ENST00000572525 FER1L6Q2WGJ9 1857 aa14.18□□□□□ -0.14
CHMP6-203ENST00000572525 WASHC2AQ641Q2 1341 aa14.18□□□□□ -0.14
CHMP6-203ENST00000572525 VIRMAQ69YN4 1812 aaKnown RBP14.18□□□□□ -0.14
CHMP6-203ENST00000572525 SLC4A9Q96Q91 983 aa14.18□□□□□ -0.14
CHMP6-203ENST00000572525 SCN11AQ9UI33 1791 aa14.18□□□□□ -0.14
CHMP6-203ENST00000572525 ST20-MTHFSA0A0A6YYL1 179 aa14.17□□□□□ -0.14
CHMP6-203ENST00000572525 GLTPD2A6NH11 291 aa14.17□□□□□ -0.14
CHMP6-203ENST00000572525 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
CHMP6-203ENST00000572525 LMNB1P20700 586 aa14.16□□□□□ -0.14
CHMP6-203ENST00000572525 USP42Q9H9J4 1324 aaKnown RBP14.15□□□□□ -0.14
CHMP6-203ENST00000572525 EYA1Q99502 592 aa14.15□□□□□ -0.14
CHMP6-203ENST00000572525 EMILIN1Q9Y6C2 1016 aa14.15□□□□□ -0.14
CHMP6-203ENST00000572525 SCN4AP35499 1836 aa14.15□□□□□ -0.14
CHMP6-203ENST00000572525 PRDM10Q9NQV6 1147 aa14.14□□□□□ -0.15
CHMP6-203ENST00000572525 DDR1Q08345 913 aa14.13□□□□□ -0.15
CHMP6-203ENST00000572525 CDCA8Q53HL2 280 aa14.13□□□□□ -0.15
CHMP6-203ENST00000572525 ARFGEF2Q9Y6D5 1785 aa14.13□□□□□ -0.15
CHMP6-203ENST00000572525 POLRMTO00411 1230 aaKnown RBP14.12□□□□□ -0.15
CHMP6-203ENST00000572525 TM4SF1P30408 202 aa14.12□□□□□ -0.15
CHMP6-203ENST00000572525 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
CHMP6-203ENST00000572525 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
CHMP6-203ENST00000572525 CRKLP46109 303 aaKnown RBP14.11□□□□□ -0.15
CHMP6-203ENST00000572525 FKBP8Q14318 412 aa14.11□□□□□ -0.15
CHMP6-203ENST00000572525 ANKRD31Q8N7Z5 1873 aa14.11□□□□□ -0.15
CHMP6-203ENST00000572525 CHRNA5P30532 468 aa14.1□□□□□ -0.15
CHMP6-203ENST00000572525 PCDH10Q9P2E7 1040 aa14.1□□□□□ -0.15
CHMP6-203ENST00000572525 POTECB2RU33 542 aa14.08□□□□□ -0.16
CHMP6-203ENST00000572525 RASSF7Q02833 373 aa14.08□□□□□ -0.16
CHMP6-203ENST00000572525 DPY19L2Q6NUT2 758 aa14.08□□□□□ -0.16
CHMP6-203ENST00000572525 CNTNAP1P78357 1384 aa14.08□□□□□ -0.16
CHMP6-203ENST00000572525 CACNA1SQ13698 1873 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms