RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 PTPRCP08575 1304 aa26.12■■□□□ 1.77
CHRNE-202ENST00000572438 KDM6AO15550 1401 aaPredicted RBP26.12■■□□□ 1.77
CHRNE-202ENST00000572438 SLC4A2P04920 1241 aa26.12■■□□□ 1.77
CHRNE-202ENST00000572438 CYP27B1O15528 508 aa26.11■■□□□ 1.77
CHRNE-202ENST00000572438 CCDC30Q5VVM6 783 aa26.11■■□□□ 1.77
CHRNE-202ENST00000572438 PCDHB15Q9Y5E8 787 aa26.11■■□□□ 1.77
CHRNE-202ENST00000572438 PARP4Q9UKK3 1724 aaKnown RBP26.11■■□□□ 1.77
CHRNE-202ENST00000572438 COL14A1Q05707 1796 aaKnown RBP26.11■■□□□ 1.77
CHRNE-202ENST00000572438 STK31Q9BXU1 1019 aa26.11■■□□□ 1.77
CHRNE-202ENST00000572438 BTG4Q9NY30 223 aa26.11■■□□□ 1.77
CHRNE-202ENST00000572438 VIRMAQ69YN4 1812 aaKnown RBP26.1■■□□□ 1.77
CHRNE-202ENST00000572438 IGHDP01880 384 aa26.09■■□□□ 1.77
CHRNE-202ENST00000572438 HSP90AB1P08238 724 aaKnown RBP26.09■■□□□ 1.77
CHRNE-202ENST00000572438 HOXB7P09629 217 aa26.09■■□□□ 1.77
CHRNE-202ENST00000572438 DCAF5Q96JK2 942 aa26.09■■□□□ 1.77
CHRNE-202ENST00000572438 KCNQ3O43525 872 aa26.09■■□□□ 1.77
CHRNE-202ENST00000572438 IL2RBP14784 551 aa26.09■■□□□ 1.77
CHRNE-202ENST00000572438 ZBTB40Q9NUA8 1239 aa26.09■■□□□ 1.77
CHRNE-202ENST00000572438 RGS12O14924 1447 aa26.09■■□□□ 1.77
CHRNE-202ENST00000572438 SIPA1L3O60292 1781 aaPredicted RBP26.08■■□□□ 1.77
CHRNE-202ENST00000572438 CHMP4BQ9H444 224 aaKnown RBP26.08■■□□□ 1.77
CHRNE-202ENST00000572438 ZCRB1Q8TBF4 217 aaKnown RBP26.07■■□□□ 1.76
CHRNE-202ENST00000572438 SLC52A2Q9HAB3 445 aa26.07■■□□□ 1.76
CHRNE-202ENST00000572438 SCN11AQ9UI33 1791 aa26.07■■□□□ 1.76
CHRNE-202ENST00000572438 PCDH11XQ9BZA7 1347 aa26.06■■□□□ 1.76
CHRNE-202ENST00000572438 PCDH11YQ9BZA8 1340 aa26.06■■□□□ 1.76
CHRNE-202ENST00000572438 CHMP4AQ9BY43 222 aa26.06■■□□□ 1.76
CHRNE-202ENST00000572438 HDGFL1Q5TGJ6 251 aa26.05■■□□□ 1.76
CHRNE-202ENST00000572438 MRC1P22897 1456 aa26.05■■□□□ 1.76
CHRNE-202ENST00000572438 ZBTB7BO15156 539 aaPredicted RBP26.04■■□□□ 1.76
CHRNE-202ENST00000572438 RWDD1Q9H446 243 aaPredicted RBP26.04■■□□□ 1.76
CHRNE-202ENST00000572438 INTS3Q68E01 1043 aaKnown RBP26.04■■□□□ 1.76
CHRNE-202ENST00000572438 G2E3Q7L622 706 aa26.04■■□□□ 1.76
CHRNE-202ENST00000572438 NECTIN2Q92692 538 aa26.03■■□□□ 1.76
CHRNE-202ENST00000572438 HEG1Q9ULI3 1381 aa26.03■■□□□ 1.76
CHRNE-202ENST00000572438 NFATC2IPQ8NCF5 419 aa26.02■■□□□ 1.76
CHRNE-202ENST00000572438 FLIIQ13045 1269 aa26■■□□□ 1.75
CHRNE-202ENST00000572438 GIGYF1O75420 1035 aaPredicted RBP25.99■■□□□ 1.75
CHRNE-202ENST00000572438 HDAC1Q13547 482 aaPredicted RBP25.99■■□□□ 1.75
CHRNE-202ENST00000572438 ZNF790Q6PG37 636 aa25.99■■□□□ 1.75
CHRNE-202ENST00000572438 FBXO41Q8TF61 875 aa25.99■■□□□ 1.75
CHRNE-202ENST00000572438 USP35Q9P2H5 1018 aa25.99■■□□□ 1.75
CHRNE-202ENST00000572438 EIF2S2P20042 333 aaKnown RBP25.98■■□□□ 1.75
CHRNE-202ENST00000572438 NKX1-1Q15270 411 aaPredicted RBP25.98■■□□□ 1.75
CHRNE-202ENST00000572438 ADAMTS2O95450 1211 aa25.98■■□□□ 1.75
CHRNE-202ENST00000572438 HSPA1LP34931 641 aa25.98■■□□□ 1.75
CHRNE-202ENST00000572438 CABP4P57796 275 aa25.97■■□□□ 1.75
CHRNE-202ENST00000572438 SKAP1Q86WV1 359 aa25.97■■□□□ 1.75
CHRNE-202ENST00000572438 CACNA1FO60840 1977 aa25.96■■□□□ 1.75
CHRNE-202ENST00000572438 SLC39A6Q13433 755 aa25.95■■□□□ 1.75
CHRNE-202ENST00000572438 FKBP5Q13451 457 aaPredicted RBP25.95■■□□□ 1.75
CHRNE-202ENST00000572438 DISP2A7MBM2 1401 aa25.95■■□□□ 1.74
CHRNE-202ENST00000572438 SHANK3Q9BYB0 1731 aa25.94■■□□□ 1.74
CHRNE-202ENST00000572438 PLCH1Q4KWH8 1693 aa25.94■■□□□ 1.74
CHRNE-202ENST00000572438 CCT4P50991 539 aaKnown RBP25.94■■□□□ 1.74
CHRNE-202ENST00000572438 DDX54Q8TDD1 881 aaKnown RBP25.94■■□□□ 1.74
CHRNE-202ENST00000572438 CHPF2Q9P2E5 772 aa25.94■■□□□ 1.74
CHRNE-202ENST00000572438 NUTM2BA6NNL0 878 aaPredicted RBP25.93■■□□□ 1.74
CHRNE-202ENST00000572438 NUTM2EB1AL46 878 aaPredicted RBP25.93■■□□□ 1.74
CHRNE-202ENST00000572438 ERVV-2B6SEH9 535 aa25.93■■□□□ 1.74
CHRNE-202ENST00000572438 F6X3S4 739 aa25.93■■□□□ 1.74
CHRNE-202ENST00000572438 NUTM2AQ8IVF1 878 aaPredicted RBP25.93■■□□□ 1.74
CHRNE-202ENST00000572438 TTC5Q8N0Z6 440 aa25.92■■□□□ 1.74
CHRNE-202ENST00000572438 DBF4Q9UBU7 674 aaPredicted RBP25.92■■□□□ 1.74
CHRNE-202ENST00000572438 SLC4A10Q6U841 1118 aa25.91■■□□□ 1.74
CHRNE-202ENST00000572438 PHAXQ9H814 394 aaKnown RBP25.91■■□□□ 1.74
CHRNE-202ENST00000572438 C1orf115Q9H7X2 142 aa25.91■■□□□ 1.74
CHRNE-202ENST00000572438 PRAMEF22A3QJZ6 481 aa25.9■■□□□ 1.74
CHRNE-202ENST00000572438 ZNF496Q96IT1 587 aaPredicted RBP25.89■■□□□ 1.74
CHRNE-202ENST00000572438 PXDNLA1KZ92 1463 aa25.89■■□□□ 1.73
CHRNE-202ENST00000572438 NRAPQ86VF7 1730 aa25.89■■□□□ 1.73
CHRNE-202ENST00000572438 RBM19Q9Y4C8 960 aaKnown RBP25.88■■□□□ 1.73
CHRNE-202ENST00000572438 JCADQ9P266 1359 aa25.88■■□□□ 1.73
CHRNE-202ENST00000572438 FMNL2Q96PY5 1086 aa25.88■■□□□ 1.73
CHRNE-202ENST00000572438 RGS3P49796 1198 aa25.86■■□□□ 1.73
CHRNE-202ENST00000572438 SMC5Q8IY18 1101 aa25.86■■□□□ 1.73
CHRNE-202ENST00000572438 SNRPA1P09661 255 aaKnown RBP25.86■■□□□ 1.73
CHRNE-202ENST00000572438 PDZRN3Q9UPQ7 1066 aa25.86■■□□□ 1.73
CHRNE-202ENST00000572438 SLIT2O94813 1529 aa25.85■■□□□ 1.73
CHRNE-202ENST00000572438 MEIS3Q99687 375 aa25.85■■□□□ 1.73
CHRNE-202ENST00000572438 CDCA7Q9BWT1 371 aaPredicted RBP25.85■■□□□ 1.73
CHRNE-202ENST00000572438 SPATA31A1Q5TZJ5 1347 aa25.85■■□□□ 1.73
CHRNE-202ENST00000572438 ANXA1P04083 346 aa25.84■■□□□ 1.73
CHRNE-202ENST00000572438 HYPKQ9NX55 129 aa25.84■■□□□ 1.73
CHRNE-202ENST00000572438 THRAP3Q9Y2W1 955 aaKnown RBP25.84■■□□□ 1.73
CHRNE-202ENST00000572438 PROSER3Q2NL68 480 aa25.84■■□□□ 1.73
CHRNE-202ENST00000572438 SIRT2Q8IXJ6 389 aa25.84■■□□□ 1.73
CHRNE-202ENST00000572438 DDX21Q9NR30 783 aaKnown RBP eCLIP25.84■■□□□ 1.73
CHRNE-202ENST00000572438 NWD2Q9ULI1 1742 aa25.83■■□□□ 1.73
CHRNE-202ENST00000572438 C5P01031 1676 aa25.83■■□□□ 1.73
CHRNE-202ENST00000572438 EXOC5O00471 708 aa25.82■■□□□ 1.72
CHRNE-202ENST00000572438 WNK3Q9BYP7 1800 aa25.81■■□□□ 1.72
CHRNE-202ENST00000572438 PDIA6Q15084 440 aa25.81■■□□□ 1.72
CHRNE-202ENST00000572438 N4BP2Q86UW6 1770 aaPredicted RBP25.81■■□□□ 1.72
CHRNE-202ENST00000572438 ATP10DQ9P241 1426 aa25.81■■□□□ 1.72
CHRNE-202ENST00000572438 TNS2Q63HR2 1409 aa25.8■■□□□ 1.72
CHRNE-202ENST00000572438 TOGARAM1Q9Y4F4 1720 aa25.8■■□□□ 1.72
CHRNE-202ENST00000572438 SPATA31A5Q5VU36 1347 aa25.8■■□□□ 1.72
CHRNE-202ENST00000572438 SPATA31A7Q8IWB4 1347 aa25.8■■□□□ 1.72
CHRNE-202ENST00000572438 RPAP2Q8IXW5 612 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms