RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
TVP23A-205ENST00000572428 TNS3Q68CZ2 1445 aa11.2□□□□□ -0.62
TVP23A-205ENST00000572428 UNCXA6NJT0 531 aa11.2□□□□□ -0.62
TVP23A-205ENST00000572428 NOP58Q9Y2X3 529 aaKnown RBP11.2□□□□□ -0.62
TVP23A-205ENST00000572428 SOS2Q07890 1332 aaPredicted RBP11.2□□□□□ -0.62
TVP23A-205ENST00000572428 NPHP3Q7Z494 1330 aa11.2□□□□□ -0.62
TVP23A-205ENST00000572428 MARCH6O60337 910 aa11.19□□□□□ -0.62
TVP23A-205ENST00000572428 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
TVP23A-205ENST00000572428 ATL2Q8NHH9 583 aa11.19□□□□□ -0.62
TVP23A-205ENST00000572428 COL16A1Q07092 1604 aaPredicted RBP11.19□□□□□ -0.62
TVP23A-205ENST00000572428 NUDCQ9Y266 331 aa11.19□□□□□ -0.62
TVP23A-205ENST00000572428 FAM208AQ9UK61 1670 aaKnown RBP11.19□□□□□ -0.62
TVP23A-205ENST00000572428 TCERG1O14776 1098 aaKnown RBP11.19□□□□□ -0.62
TVP23A-205ENST00000572428 PHLPP1O60346 1717 aa11.19□□□□□ -0.62
TVP23A-205ENST00000572428 CT47B1P0C2W7 299 aaPredicted RBP11.19□□□□□ -0.62
TVP23A-205ENST00000572428 POLKQ9UBT6 870 aa11.19□□□□□ -0.62
TVP23A-205ENST00000572428 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
TVP23A-205ENST00000572428 PSME1Q06323 249 aa11.18□□□□□ -0.62
TVP23A-205ENST00000572428 WDR70Q9NW82 654 aa11.18□□□□□ -0.62
TVP23A-205ENST00000572428 RGPD5Q99666 1765 aa11.18□□□□□ -0.62
TVP23A-205ENST00000572428 MTHFSP49914 203 aa11.18□□□□□ -0.62
TVP23A-205ENST00000572428 KRT28Q7Z3Y7 464 aa11.18□□□□□ -0.62
TVP23A-205ENST00000572428 SMAP1Q8IYB5 467 aaPredicted RBP11.18□□□□□ -0.62
TVP23A-205ENST00000572428 RTL1A6NKG5 1358 aa11.18□□□□□ -0.62
TVP23A-205ENST00000572428 SSFA2P28290 1259 aa11.17□□□□□ -0.62
TVP23A-205ENST00000572428 NBPF9Q3BBW0 867 aa11.17□□□□□ -0.62
TVP23A-205ENST00000572428 DNTTIP2Q5QJE6 756 aaKnown RBP11.17□□□□□ -0.62
TVP23A-205ENST00000572428 ARHGEF1Q92888 912 aaKnown RBP11.17□□□□□ -0.62
TVP23A-205ENST00000572428 LMO7Q8WWI1 1683 aa11.17□□□□□ -0.62
TVP23A-205ENST00000572428 HSP90AB3PQ58FF7 597 aa11.17□□□□□ -0.62
TVP23A-205ENST00000572428 RNF217Q8TC41 542 aa11.17□□□□□ -0.62
TVP23A-205ENST00000572428 FOXO3O43524 673 aa11.17□□□□□ -0.62
TVP23A-205ENST00000572428 PDE3BQ13370 1112 aa11.17□□□□□ -0.62
TVP23A-205ENST00000572428 SPATA31A3Q5VYP0 1347 aa11.16□□□□□ -0.62
TVP23A-205ENST00000572428 ARHGEF10O15013 1369 aa11.16□□□□□ -0.62
TVP23A-205ENST00000572428 ZNF662Q6ZS27 426 aa11.16□□□□□ -0.62
TVP23A-205ENST00000572428 PPME1Q9Y570 386 aa11.16□□□□□ -0.62
TVP23A-205ENST00000572428 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
TVP23A-205ENST00000572428 RBM27Q9P2N5 1060 aaKnown RBP11.16□□□□□ -0.62
TVP23A-205ENST00000572428 SUGT1Q9Y2Z0 365 aa11.16□□□□□ -0.62
TVP23A-205ENST00000572428 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
TVP23A-205ENST00000572428 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
TVP23A-205ENST00000572428 SCP2P22307 547 aa11.15□□□□□ -0.63
TVP23A-205ENST00000572428 RGPD2P0DJD1 1756 aa11.14□□□□□ -0.63
TVP23A-205ENST00000572428 TPD52L2O43399 206 aaKnown RBP11.14□□□□□ -0.63
TVP23A-205ENST00000572428 CFAP53Q96M91 514 aa11.14□□□□□ -0.63
TVP23A-205ENST00000572428 RNF123Q5XPI4 1314 aa11.14□□□□□ -0.63
TVP23A-205ENST00000572428 DHX16O60231 1041 aaKnown RBP11.14□□□□□ -0.63
TVP23A-205ENST00000572428 KCNH5Q8NCM2 988 aa11.14□□□□□ -0.63
TVP23A-205ENST00000572428 PPP4R2Q9NY27 417 aa11.14□□□□□ -0.63
TVP23A-205ENST00000572428 NLRP6P59044 892 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
TVP23A-205ENST00000572428 TRIM44Q96DX7 344 aaPredicted RBP11.13□□□□□ -0.63
TVP23A-205ENST00000572428 PPP1R1BQ9UD71 204 aaPredicted RBP11.13□□□□□ -0.63
TVP23A-205ENST00000572428 DLG5Q8TDM6 1919 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 FLT4P35916 1363 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 GOLGA6CA6NDK9 693 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 GOLGA6BA6NDN3 693 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 GOLGA6DP0CG33 693 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 RHBDL3P58872 404 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 GOLGA6AQ9NYA3 693 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 ZBTB9Q96C00 473 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
TVP23A-205ENST00000572428 MAP2K1Q02750 393 aaPredicted RBP11.12□□□□□ -0.63
TVP23A-205ENST00000572428 UTP14CQ5TAP6 766 aaKnown RBP11.12□□□□□ -0.63
TVP23A-205ENST00000572428 CPDO75976 1380 aa11.12□□□□□ -0.63
TVP23A-205ENST00000572428 GOLIM4O00461 696 aa11.12□□□□□ -0.63
TVP23A-205ENST00000572428 IL13P35225 146 aa11.12□□□□□ -0.63
TVP23A-205ENST00000572428 MAP3K19Q56UN5 1328 aa11.12□□□□□ -0.63
TVP23A-205ENST00000572428 GET4Q7L5D6 327 aaPredicted RBP11.12□□□□□ -0.63
TVP23A-205ENST00000572428 TNNT2P45379 298 aaPredicted RBP11.11□□□□□ -0.63
TVP23A-205ENST00000572428 TSPAN18Q96SJ8 248 aa11.11□□□□□ -0.63
TVP23A-205ENST00000572428 ADAMTS8Q9UP79 889 aa11.11□□□□□ -0.63
TVP23A-205ENST00000572428 EMILIN1Q9Y6C2 1016 aa11.11□□□□□ -0.63
TVP23A-205ENST00000572428 RRAGDQ9NQL2 400 aaPredicted RBP11.11□□□□□ -0.63
TVP23A-205ENST00000572428 PEX14O75381 377 aa11.11□□□□□ -0.63
TVP23A-205ENST00000572428 HS6ST3Q8IZP7 471 aa11.11□□□□□ -0.63
TVP23A-205ENST00000572428 GEMIN8Q9NWZ8 242 aaKnown RBP11.11□□□□□ -0.63
TVP23A-205ENST00000572428 DDX46Q7L014 1031 aaKnown RBP11.1□□□□□ -0.63
TVP23A-205ENST00000572428 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
TVP23A-205ENST00000572428 RIOK3O14730 519 aaKnown RBP11.1□□□□□ -0.63
TVP23A-205ENST00000572428 FBLN1P23142 703 aa11.1□□□□□ -0.63
TVP23A-205ENST00000572428 COL14A1Q05707 1796 aaKnown RBP11.1□□□□□ -0.63
TVP23A-205ENST00000572428 ERBB3P21860 1342 aa11.1□□□□□ -0.63
TVP23A-205ENST00000572428 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
TVP23A-205ENST00000572428 SDR16C5Q8N3Y7 309 aa11.1□□□□□ -0.63
TVP23A-205ENST00000572428 BANK1Q8NDB2 785 aa11.1□□□□□ -0.63
TVP23A-205ENST00000572428 DDX17Q92841 729 aaKnown RBP11.1□□□□□ -0.63
TVP23A-205ENST00000572428 VIRMAQ69YN4 1812 aaKnown RBP11.09□□□□□ -0.63
TVP23A-205ENST00000572428 GCP02774 474 aa11.09□□□□□ -0.63
TVP23A-205ENST00000572428 RRS1Q15050 365 aaKnown RBP11.09□□□□□ -0.63
TVP23A-205ENST00000572428 WDR43Q15061 677 aaKnown RBP eCLIP11.09□□□□□ -0.63
TVP23A-205ENST00000572428 ARHGEF25Q86VW2 580 aa11.09□□□□□ -0.63
TVP23A-205ENST00000572428 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
TVP23A-205ENST00000572428 TOM1O60784 492 aa11.09□□□□□ -0.63
TVP23A-205ENST00000572428 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
TVP23A-205ENST00000572428 NBPF10Q6P3W6 841 aaKnown RBP11.09□□□□□ -0.63
TVP23A-205ENST00000572428 PIK3R5Q8WYR1 880 aa11.09□□□□□ -0.63
TVP23A-205ENST00000572428 KDRP35968 1356 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms