RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 AEBP1Q8IUX7 1158 aa17.6■□□□□ 0.41
ATP2A3-211ENST00000572176 ATG3Q9NT62 314 aa17.6■□□□□ 0.41
ATP2A3-211ENST00000572176 ERVV-2B6SEH9 535 aa17.59■□□□□ 0.41
ATP2A3-211ENST00000572176 PHF14O94880 888 aa17.59■□□□□ 0.41
ATP2A3-211ENST00000572176 AMOTQ4VCS5 1084 aa17.59■□□□□ 0.41
ATP2A3-211ENST00000572176 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
ATP2A3-211ENST00000572176 DCAF5Q96JK2 942 aa17.59■□□□□ 0.41
ATP2A3-211ENST00000572176 COL5A3P25940 1745 aaPredicted RBP17.58■□□□□ 0.41
ATP2A3-211ENST00000572176 ATP6V1AP38606 617 aa17.58■□□□□ 0.4
ATP2A3-211ENST00000572176 ZNF530Q6P9A1 599 aaPredicted RBP17.58■□□□□ 0.4
ATP2A3-211ENST00000572176 SMIM5Q71RC9 77 aa17.58■□□□□ 0.4
ATP2A3-211ENST00000572176 IL13P35225 146 aa17.57■□□□□ 0.4
ATP2A3-211ENST00000572176 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
ATP2A3-211ENST00000572176 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
ATP2A3-211ENST00000572176 GNPATO15228 680 aa17.56■□□□□ 0.4
ATP2A3-211ENST00000572176 YBX3P16989 372 aaKnown RBP eCLIP17.56■□□□□ 0.4
ATP2A3-211ENST00000572176 SLC4A9Q96Q91 983 aa17.56■□□□□ 0.4
ATP2A3-211ENST00000572176 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
ATP2A3-211ENST00000572176 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
ATP2A3-211ENST00000572176 SCN11AQ9UI33 1791 aa17.54■□□□□ 0.4
ATP2A3-211ENST00000572176 PER1O15534 1290 aaPredicted RBP17.53■□□□□ 0.4
ATP2A3-211ENST00000572176 GRIN3BO60391 1043 aa17.53■□□□□ 0.4
ATP2A3-211ENST00000572176 CABP4P57796 275 aa17.53■□□□□ 0.4
ATP2A3-211ENST00000572176 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
ATP2A3-211ENST00000572176 CNTNAP4Q9C0A0 1308 aa17.52■□□□□ 0.4
ATP2A3-211ENST00000572176 MTHFSP49914 203 aa17.52■□□□□ 0.4
ATP2A3-211ENST00000572176 C4AP0C0L4 1744 aa17.51■□□□□ 0.39
ATP2A3-211ENST00000572176 TJP1Q07157 1748 aa17.51■□□□□ 0.39
ATP2A3-211ENST00000572176 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
ATP2A3-211ENST00000572176 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
ATP2A3-211ENST00000572176 MRC1P22897 1456 aa17.5■□□□□ 0.39
ATP2A3-211ENST00000572176 RC3H1Q5TC82 1133 aaKnown RBP17.5■□□□□ 0.39
ATP2A3-211ENST00000572176 RTCBQ9Y3I0 505 aaKnown RBP17.5■□□□□ 0.39
ATP2A3-211ENST00000572176 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
ATP2A3-211ENST00000572176 ADRA2BP18089 450 aa17.49■□□□□ 0.39
ATP2A3-211ENST00000572176 NPC1L1Q9UHC9 1359 aa17.49■□□□□ 0.39
ATP2A3-211ENST00000572176 COL3A1P02461 1466 aaPredicted RBP17.49■□□□□ 0.39
ATP2A3-211ENST00000572176 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
ATP2A3-211ENST00000572176 KIAA1551Q9HCM1 1747 aa17.48■□□□□ 0.39
ATP2A3-211ENST00000572176 TRAPPC3LQ5T215 181 aa17.48■□□□□ 0.39
ATP2A3-211ENST00000572176 VIRMAQ69YN4 1812 aaKnown RBP17.48■□□□□ 0.39
ATP2A3-211ENST00000572176 AKAP4Q5JQC9 854 aa17.47■□□□□ 0.39
ATP2A3-211ENST00000572176 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
ATP2A3-211ENST00000572176 NFATC2IPQ8NCF5 419 aa17.47■□□□□ 0.39
ATP2A3-211ENST00000572176 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
ATP2A3-211ENST00000572176 MMP10P09238 476 aa17.46■□□□□ 0.39
ATP2A3-211ENST00000572176 ARHGEF1Q92888 912 aaKnown RBP17.46■□□□□ 0.39
ATP2A3-211ENST00000572176 C10orf71Q711Q0 1435 aa17.46■□□□□ 0.39
ATP2A3-211ENST00000572176 PXDNLA1KZ92 1463 aa17.45■□□□□ 0.38
ATP2A3-211ENST00000572176 PTCD1O75127 700 aaKnown RBP17.45■□□□□ 0.38
ATP2A3-211ENST00000572176 HMOX1P09601 288 aa17.45■□□□□ 0.38
ATP2A3-211ENST00000572176 ADCY9O60503 1353 aa17.44■□□□□ 0.38
ATP2A3-211ENST00000572176 DIAPH1O60610 1272 aaKnown RBP17.44■□□□□ 0.38
ATP2A3-211ENST00000572176 CRKLP46109 303 aaKnown RBP17.44■□□□□ 0.38
ATP2A3-211ENST00000572176 NLGN1Q8N2Q7 840 aa17.44■□□□□ 0.38
ATP2A3-211ENST00000572176 SLC52A2Q9HAB3 445 aa17.44■□□□□ 0.38
ATP2A3-211ENST00000572176 GYS1P13807 737 aa17.43■□□□□ 0.38
ATP2A3-211ENST00000572176 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
ATP2A3-211ENST00000572176 ATP10DQ9P241 1426 aa17.42■□□□□ 0.38
ATP2A3-211ENST00000572176 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
ATP2A3-211ENST00000572176 RFC4P35249 363 aa17.42■□□□□ 0.38
ATP2A3-211ENST00000572176 C1QTNF8P60827 252 aa17.42■□□□□ 0.38
ATP2A3-211ENST00000572176 MTHFSDQ2M296 383 aaKnown RBP17.42■□□□□ 0.38
ATP2A3-211ENST00000572176 LGR6Q9HBX8 967 aa17.42■□□□□ 0.38
ATP2A3-211ENST00000572176 N4BP2Q86UW6 1770 aaPredicted RBP17.41■□□□□ 0.38
ATP2A3-211ENST00000572176 UBR2Q8IWV8 1755 aa17.4■□□□□ 0.38
ATP2A3-211ENST00000572176 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
ATP2A3-211ENST00000572176 WWC3Q9ULE0 1092 aa17.4■□□□□ 0.38
ATP2A3-211ENST00000572176 USP42Q9H9J4 1324 aaKnown RBP17.4■□□□□ 0.38
ATP2A3-211ENST00000572176 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
ATP2A3-211ENST00000572176 CCDC87Q9NVE4 849 aa17.39■□□□□ 0.37
ATP2A3-211ENST00000572176 BRCA1P38398 1863 aaKnown RBP17.39■□□□□ 0.37
ATP2A3-211ENST00000572176 TGFB2P61812 414 aa17.38■□□□□ 0.37
ATP2A3-211ENST00000572176 DNAJC10Q8IXB1 793 aa17.38■□□□□ 0.37
ATP2A3-211ENST00000572176 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
ATP2A3-211ENST00000572176 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
ATP2A3-211ENST00000572176 PARP3Q9Y6F1 533 aa17.37■□□□□ 0.37
ATP2A3-211ENST00000572176 SIPA1L3O60292 1781 aaPredicted RBP17.36■□□□□ 0.37
ATP2A3-211ENST00000572176 FKBP8Q14318 412 aa17.36■□□□□ 0.37
ATP2A3-211ENST00000572176 SOS1Q07889 1333 aaPredicted RBP17.36■□□□□ 0.37
ATP2A3-211ENST00000572176 CYP19A1P11511 503 aaPredicted RBP17.35■□□□□ 0.37
ATP2A3-211ENST00000572176 CNGB1Q14028 1251 aaPredicted RBP17.35■□□□□ 0.37
ATP2A3-211ENST00000572176 SENP3-EIF4A1A0A087X0R7 540 aa17.34■□□□□ 0.37
ATP2A3-211ENST00000572176 U2SURPO15042 1029 aaKnown RBP17.34■□□□□ 0.37
ATP2A3-211ENST00000572176 DDR1Q08345 913 aa17.34■□□□□ 0.37
ATP2A3-211ENST00000572176 VSIG10Q8N0Z9 540 aa17.34■□□□□ 0.37
ATP2A3-211ENST00000572176 COL15A1P39059 1388 aa17.33■□□□□ 0.36
ATP2A3-211ENST00000572176 A0A0G2JLW4 131 aa17.33■□□□□ 0.36
ATP2A3-211ENST00000572176 DPEP1P16444 411 aa17.33■□□□□ 0.36
ATP2A3-211ENST00000572176 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.36
ATP2A3-211ENST00000572176 ZBTB1Q9Y2K1 713 aa17.33■□□□□ 0.36
ATP2A3-211ENST00000572176 ARFGEF1Q9Y6D6 1849 aa17.33■□□□□ 0.36
ATP2A3-211ENST00000572176 GPBP1L1Q9HC44 474 aaPredicted RBP17.32■□□□□ 0.36
ATP2A3-211ENST00000572176 BCS1LQ9Y276 419 aa17.32■□□□□ 0.36
ATP2A3-211ENST00000572176 NRXN2Q9P2S2 1712 aa17.31■□□□□ 0.36
ATP2A3-211ENST00000572176 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
ATP2A3-211ENST00000572176 POLRMTO00411 1230 aaKnown RBP17.31■□□□□ 0.36
ATP2A3-211ENST00000572176 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
ATP2A3-211ENST00000572176 CEMIPQ8WUJ3 1361 aa17.3■□□□□ 0.36
ATP2A3-211ENST00000572176 ZPR1O75312 459 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms