RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CNGB1Q14028 1251 aaPredicted RBP18.55■□□□□ 0.56
RPAIN-209ENST00000571558 PIGBQ92521 554 aa18.55■□□□□ 0.56
RPAIN-209ENST00000571558 LOC102724428A0A0B4J2F2 783 aa18.54■□□□□ 0.56
RPAIN-209ENST00000571558 PHF14O94880 888 aa18.54■□□□□ 0.56
RPAIN-209ENST00000571558 SIK1P57059 783 aa18.54■□□□□ 0.56
RPAIN-209ENST00000571558 HSP90AB2PQ58FF8 381 aa18.54■□□□□ 0.56
RPAIN-209ENST00000571558 AMIGO3Q86WK7 504 aa18.54■□□□□ 0.56
RPAIN-209ENST00000571558 DNAJC5GQ8N7S2 189 aa18.54■□□□□ 0.56
RPAIN-209ENST00000571558 UBR3Q6ZT12 1888 aa18.53■□□□□ 0.56
RPAIN-209ENST00000571558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.562e-8■□□□□ 9.4
RPAIN-209ENST00000571558 SPG7Q9UQ90 795 aa18.53■□□□□ 0.56
RPAIN-209ENST00000571558 TOGARAM1Q9Y4F4 1720 aa18.52■□□□□ 0.56
RPAIN-209ENST00000571558 MORC1Q86VD1 984 aa18.51■□□□□ 0.55
RPAIN-209ENST00000571558 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
RPAIN-209ENST00000571558 NLGN1Q8N2Q7 840 aa18.5■□□□□ 0.55
RPAIN-209ENST00000571558 LINC00116Q8NCU8 138 aa18.5■□□□□ 0.55
RPAIN-209ENST00000571558 GNPATO15228 680 aa18.49■□□□□ 0.55
RPAIN-209ENST00000571558 MMP10P09238 476 aa18.49■□□□□ 0.55
RPAIN-209ENST00000571558 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
RPAIN-209ENST00000571558 TMOD3Q9NYL9 352 aa18.49■□□□□ 0.55
RPAIN-209ENST00000571558 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
RPAIN-209ENST00000571558 ITGB4P16144 1822 aa18.49■□□□□ 0.55
RPAIN-209ENST00000571558 WWC3Q9ULE0 1092 aa18.49■□□□□ 0.55
RPAIN-209ENST00000571558 MAP2P11137 1827 aaKnown RBP18.48■□□□□ 0.55
RPAIN-209ENST00000571558 PKD1L3Q7Z443 1732 aa18.48■□□□□ 0.55
RPAIN-209ENST00000571558 PXDNLA1KZ92 1463 aa18.48■□□□□ 0.55
RPAIN-209ENST00000571558 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
RPAIN-209ENST00000571558 ATP6V1AP38606 617 aa18.48■□□□□ 0.55
RPAIN-209ENST00000571558 PLEKHG2Q9H7P9 1386 aa18.47■□□□□ 0.55
RPAIN-209ENST00000571558 RBM46Q8TBY0 533 aaKnown RBP18.47■□□□□ 0.55
RPAIN-209ENST00000571558 TRAPPC3LQ5T215 181 aa18.46■□□□□ 0.55
RPAIN-209ENST00000571558 SMIM5Q71RC9 77 aa18.46■□□□□ 0.55
RPAIN-209ENST00000571558 BCS1LQ9Y276 419 aa18.46■□□□□ 0.55
RPAIN-209ENST00000571558 RTCBQ9Y3I0 505 aaKnown RBP18.46■□□□□ 0.55
RPAIN-209ENST00000571558 KIF13BQ9NQT8 1826 aa18.45■□□□□ 0.54
RPAIN-209ENST00000571558 TNNT2P45379 298 aaPredicted RBP18.45■□□□□ 0.54
RPAIN-209ENST00000571558 ITPK1Q13572 414 aa18.45■□□□□ 0.54
RPAIN-209ENST00000571558 IFNL2Q8IZJ0 200 aa18.45■□□□□ 0.54
RPAIN-209ENST00000571558 ASAP1Q9ULH1 1129 aa18.45■□□□□ 0.54
RPAIN-209ENST00000571558 FSTL1Q12841 308 aa18.44■□□□□ 0.54
RPAIN-209ENST00000571558 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
RPAIN-209ENST00000571558 ARHGAP27Q6ZUM4 889 aa18.44■□□□□ 0.54
RPAIN-209ENST00000571558 CCDC87Q9NVE4 849 aa18.44■□□□□ 0.54
RPAIN-209ENST00000571558 C10orf71Q711Q0 1435 aa18.44■□□□□ 0.54
RPAIN-209ENST00000571558 A0A0G2JLW4 131 aa18.43■□□□□ 0.54
RPAIN-209ENST00000571558 RC3H1Q5TC82 1133 aaKnown RBP18.43■□□□□ 0.54
RPAIN-209ENST00000571558 C16orf71Q8IYS4 520 aaPredicted RBP18.42■□□□□ 0.54
RPAIN-209ENST00000571558 JMYQ8N9B5 988 aa18.42■□□□□ 0.54
RPAIN-209ENST00000571558 NMRK2Q9NPI5 230 aa18.42■□□□□ 0.54
RPAIN-209ENST00000571558 ATG3Q9NT62 314 aa18.42■□□□□ 0.54
RPAIN-209ENST00000571558 PHKG2P15735 406 aa18.41■□□□□ 0.54
RPAIN-209ENST00000571558 KLRG1Q96E93 195 aa18.41■□□□□ 0.54
RPAIN-209ENST00000571558 EMILIN1Q9Y6C2 1016 aa18.41■□□□□ 0.54
RPAIN-209ENST00000571558 FCHSD2O94868 740 aa18.4■□□□□ 0.54
RPAIN-209ENST00000571558 POLKQ9UBT6 870 aa18.4■□□□□ 0.54
RPAIN-209ENST00000571558 KDM2BQ8NHM5 1336 aa18.4■□□□□ 0.54
RPAIN-209ENST00000571558 KIAA1551Q9HCM1 1747 aa18.4■□□□□ 0.54
RPAIN-209ENST00000571558 DPEP1P16444 411 aa18.4■□□□□ 0.54
RPAIN-209ENST00000571558 PARP3Q9Y6F1 533 aa18.4■□□□□ 0.54
RPAIN-209ENST00000571558 ZNF831Q5JPB2 1677 aa18.4■□□□□ 0.54
RPAIN-209ENST00000571558 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
RPAIN-209ENST00000571558 RFC4P35249 363 aa18.39■□□□□ 0.53
RPAIN-209ENST00000571558 MTHFSP49914 203 aa18.39■□□□□ 0.53
RPAIN-209ENST00000571558 ARHGEF1Q92888 912 aaKnown RBP18.39■□□□□ 0.53
RPAIN-209ENST00000571558 EYA1Q99502 592 aa18.39■□□□□ 0.53
RPAIN-209ENST00000571558 KDRP35968 1356 aa18.39■□□□□ 0.53
RPAIN-209ENST00000571558 CNTNAP4Q9C0A0 1308 aa18.38■□□□□ 0.53
RPAIN-209ENST00000571558 RPS6KA4O75676 772 aa18.38■□□□□ 0.53
RPAIN-209ENST00000571558 GYS1P13807 737 aa18.38■□□□□ 0.53
RPAIN-209ENST00000571558 C9orf131Q5VYM1 1079 aa18.38■□□□□ 0.53
RPAIN-209ENST00000571558 PIM2Q9P1W9 311 aa18.38■□□□□ 0.53
RPAIN-209ENST00000571558 WDR90Q96KV7 1748 aa18.37■□□□□ 0.53
RPAIN-209ENST00000571558 PPM1GO15355 546 aaPredicted RBP18.37■□□□□ 0.53
RPAIN-209ENST00000571558 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
RPAIN-209ENST00000571558 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
RPAIN-209ENST00000571558 COL3A1P02461 1466 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-209ENST00000571558 KCNA3P22001 575 aa18.36■□□□□ 0.53
RPAIN-209ENST00000571558 C4AP0C0L4 1744 aa18.36■□□□□ 0.53
RPAIN-209ENST00000571558 N4BP2Q86UW6 1770 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-209ENST00000571558 DCAF5Q96JK2 942 aa18.35■□□□□ 0.53
RPAIN-209ENST00000571558 DALRD3Q5D0E6 543 aaKnown RBP18.34■□□□□ 0.53
RPAIN-209ENST00000571558 SLC4A9Q96Q91 983 aa18.34■□□□□ 0.53
RPAIN-209ENST00000571558 COL13A1Q5TAT6 717 aaPredicted RBP18.33■□□□□ 0.53
RPAIN-209ENST00000571558 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.53
RPAIN-209ENST00000571558 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.52
RPAIN-209ENST00000571558 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.52
RPAIN-209ENST00000571558 PNISRQ8TF01 805 aaKnown RBP18.32■□□□□ 0.52
RPAIN-209ENST00000571558 ARFGEF1Q9Y6D6 1849 aa18.32■□□□□ 0.52
RPAIN-209ENST00000571558 SMC1BQ8NDV3 1235 aa18.32■□□□□ 0.52
RPAIN-209ENST00000571558 RNF181Q9P0P0 153 aa18.31■□□□□ 0.52
RPAIN-209ENST00000571558 CFAP53Q96M91 514 aa18.3■□□□□ 0.52
RPAIN-209ENST00000571558 KCPQ6ZWJ8 1503 aa18.29■□□□□ 0.52
RPAIN-209ENST00000571558 PRELPP51888 382 aa18.29■□□□□ 0.52
RPAIN-209ENST00000571558 AMOTQ4VCS5 1084 aa18.29■□□□□ 0.52
RPAIN-209ENST00000571558 PLEKHO1Q53GL0 409 aaPredicted RBP18.29■□□□□ 0.52
RPAIN-209ENST00000571558 TNS4Q8IZW8 715 aa18.29■□□□□ 0.52
RPAIN-209ENST00000571558 RRAGCQ9HB90 399 aa18.29■□□□□ 0.52
RPAIN-209ENST00000571558 COL5A3P25940 1745 aaPredicted RBP18.29■□□□□ 0.52
RPAIN-209ENST00000571558 PCNTO95613 3336 aa18.28■□□□□ 0.52
RPAIN-209ENST00000571558 CABP4P57796 275 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms