RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 USP4Q13107 963 aa8.88□□□□□ -0.99
KARSP3-201ENST00000571212 ZNF837Q96EG3 531 aaPredicted RBP8.88□□□□□ -0.99
KARSP3-201ENST00000571212 XAGE2Q96GT9 111 aa8.88□□□□□ -0.99
KARSP3-201ENST00000571212 CHIC2Q9UKJ5 165 aa8.88□□□□□ -0.99
KARSP3-201ENST00000571212 HRH3Q9Y5N1 445 aa8.88□□□□□ -0.99
KARSP3-201ENST00000571212 CEP164Q9UPV0 1460 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 SPATA31C2B4DYI2 1134 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 GAS6Q14393 721 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 ETNK1Q9HBU6 452 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 DYRK1BQ9Y463 629 aa8.87□□□□□ -0.99
KARSP3-201ENST00000571212 WASLO00401 505 aaPredicted RBP8.86□□□□□ -0.99
KARSP3-201ENST00000571212 TAS1R3Q7RTX0 852 aa8.86□□□□□ -0.99
KARSP3-201ENST00000571212 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
KARSP3-201ENST00000571212 PLPP7Q8NBV4 271 aa8.86□□□□□ -0.99
KARSP3-201ENST00000571212 ZSCAN10Q96SZ4 725 aaPredicted RBP8.86□□□□□ -0.99
KARSP3-201ENST00000571212 TIMMDC1Q9NPL8 285 aa8.86□□□□□ -0.99
KARSP3-201ENST00000571212 ZNF385CQ66K41 422 aaPredicted RBP8.85□□□□□ -0.99
KARSP3-201ENST00000571212 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
KARSP3-201ENST00000571212 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
KARSP3-201ENST00000571212 GTPBP3Q969Y2 492 aaKnown RBP8.85□□□□□ -0.99
KARSP3-201ENST00000571212 GPAMQ9HCL2 828 aa8.84□□□□□ -0.99
KARSP3-201ENST00000571212 CFTRP13569 1480 aa8.83□□□□□ -1
KARSP3-201ENST00000571212 ADAMTS2O95450 1211 aa8.83□□□□□ -1
KARSP3-201ENST00000571212 SLURP2P0DP57 97 aa8.83□□□□□ -1
KARSP3-201ENST00000571212 TMEM214Q6NUQ4 689 aaKnown RBP8.83□□□□□ -1
KARSP3-201ENST00000571212 POM121CA8CG34 1229 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 THBS1P07996 1170 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 SCNN1DP51172 638 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 C4orf17Q53FE4 359 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 ESCO1Q5FWF5 840 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 WDR44Q5JSH3 913 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 SVOPQ8N4V2 548 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 ALG2Q9H553 416 aa8.82□□□□□ -1
KARSP3-201ENST00000571212 F11P03951 625 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 SOX11P35716 441 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 LYPD4Q6UWN0 246 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 SIRT1Q96EB6 747 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 ADAMTS8Q9UP79 889 aa8.81□□□□□ -1
KARSP3-201ENST00000571212 GDF10P55107 478 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 TLR1Q15399 786 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 H7C1W4 665 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 RAD21O60216 631 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 INHAP05111 366 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 SKIP12755 728 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 UBTFP17480 764 aaKnown RBP8.8□□□□□ -1
KARSP3-201ENST00000571212 GMCL1Q96IK5 515 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 NUCKS1Q9H1E3 243 aaKnown RBP8.8□□□□□ -1
KARSP3-201ENST00000571212 SERTAD1Q9UHV2 236 aa8.8□□□□□ -1
KARSP3-201ENST00000571212 SRSF11Q05519 484 aaKnown RBP8.79□□□□□ -1
KARSP3-201ENST00000571212 GNASQ5JWF2 1037 aa8.79□□□□□ -1
KARSP3-201ENST00000571212 ADAMTS19Q8TE59 1207 aa8.79□□□□□ -1
KARSP3-201ENST00000571212 RUBCNLQ9H714 662 aa8.79□□□□□ -1
KARSP3-201ENST00000571212 TOP2AP11388 1531 aaKnown RBP8.79□□□□□ -1
KARSP3-201ENST00000571212 RSF1Q96T23 1441 aaPredicted RBP8.78□□□□□ -1
KARSP3-201ENST00000571212 URB2Q14146 1524 aaKnown RBP8.78□□□□□ -1
KARSP3-201ENST00000571212 FLIIQ13045 1269 aa8.78□□□□□ -1
KARSP3-201ENST00000571212 FOXR1Q6PIV2 292 aa8.78□□□□□ -1
KARSP3-201ENST00000571212 PPARGC1BQ86YN6 1023 aaKnown RBP8.78□□□□□ -1
KARSP3-201ENST00000571212 DEPDC4Q8N2C3 294 aa8.78□□□□□ -1
KARSP3-201ENST00000571212 PRDM2Q13029 1718 aa8.78□□□□□ -1
KARSP3-201ENST00000571212 TMEM229AB2RXF0 380 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 ARHGEF15O94989 841 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 MSX1P28360 303 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 GTF2E1P29083 439 aaPredicted RBP8.77□□□□□ -1.01
KARSP3-201ENST00000571212 RHBDD1Q8TEB9 315 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 MBIPQ9NS73 344 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 PCDHGA11Q9Y5H2 935 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 IGF1RP08069 1367 aa8.77□□□□□ -1.01
KARSP3-201ENST00000571212 A0A1B0GTH6 734 aa8.76□□□□□ -1.01
KARSP3-201ENST00000571212 GSK3AP49840 483 aa8.76□□□□□ -1.01
KARSP3-201ENST00000571212 CELA2BP08218 269 aaPredicted RBP8.75□□□□□ -1.01
KARSP3-201ENST00000571212 PLA2G4AP47712 749 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 NCOA4Q13772 614 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 WWC1Q8IX03 1113 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 CLUAP1Q96AJ1 413 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 SMTNP53814 917 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 UBAP2LQ14157 1087 aaKnown RBP8.75□□□□□ -1.01
KARSP3-201ENST00000571212 EML3Q32P44 896 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 TRERF1Q96PN7 1200 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 USP3Q9Y6I4 520 aa8.75□□□□□ -1.01
KARSP3-201ENST00000571212 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
KARSP3-201ENST00000571212 HDGFL1Q5TGJ6 251 aa8.74□□□□□ -1.01
KARSP3-201ENST00000571212 MX2P20592 715 aa8.73□□□□□ -1.01
KARSP3-201ENST00000571212 KCNMA1Q12791 1236 aa8.73□□□□□ -1.01
KARSP3-201ENST00000571212 AIDAQ96BJ3 306 aa8.73□□□□□ -1.01
KARSP3-201ENST00000571212 USP17L5A8MUK1 530 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 GTF2IP78347 998 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.72□□□□□ -1.01
KARSP3-201ENST00000571212 ACDQ96AP0 544 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 UCN2Q96RP3 112 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
KARSP3-201ENST00000571212 A6NJY4 79 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 CSB-PGBD3P0DP91 1061 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 PSME1Q06323 249 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 TBC1D9Q6ZT07 1266 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 PGBD3Q8N328 593 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 SLC4A9Q96Q91 983 aa8.71□□□□□ -1.01
KARSP3-201ENST00000571212 MAP3K10Q02779 954 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 ZNF295-AS1Q8N0V1 137 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms