RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 ATG3Q9NT62 314 aa28.62■■■□□ 2.17
RPA1-202ENST00000570451 ERVV-2B6SEH9 535 aa28.61■■■□□ 2.17
RPA1-202ENST00000570451 AMIGO3Q86WK7 504 aa28.61■■■□□ 2.17
RPA1-202ENST00000570451 IL13P35225 146 aa28.6■■■□□ 2.17
RPA1-202ENST00000570451 ITPK1Q13572 414 aa28.6■■■□□ 2.17
RPA1-202ENST00000570451 C1orf141Q5JVX7 400 aa28.6■■■□□ 2.17
RPA1-202ENST00000570451 CC2D1BQ5T0F9 858 aaKnown RBP28.6■■■□□ 2.17
RPA1-202ENST00000570451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.59■■■□□ 2.17
RPA1-202ENST00000570451 UBR3Q6ZT12 1888 aa28.58■■■□□ 2.17
RPA1-202ENST00000570451 CABP4P57796 275 aa28.58■■■□□ 2.17
RPA1-202ENST00000570451 CNGB1Q14028 1251 aaPredicted RBP28.58■■■□□ 2.17
RPA1-202ENST00000570451 RBM42Q9BTD8 480 aaKnown RBP28.58■■■□□ 2.17
RPA1-202ENST00000570451 GNPATO15228 680 aa28.57■■■□□ 2.16
RPA1-202ENST00000570451 MTHFSP49914 203 aa28.57■■■□□ 2.16
RPA1-202ENST00000570451 KDM6AO15550 1401 aaPredicted RBP28.57■■■□□ 2.16
RPA1-202ENST00000570451 SSFA2P28290 1259 aa28.56■■■□□ 2.16
RPA1-202ENST00000570451 PER1O15534 1290 aaPredicted RBP28.55■■■□□ 2.16
RPA1-202ENST00000570451 KDRP35968 1356 aa28.54■■■□□ 2.16
RPA1-202ENST00000570451 CHD4Q14839 1912 aa28.51■■■□□ 2.16
RPA1-202ENST00000570451 HMOX1P09601 288 aa28.51■■■□□ 2.15
RPA1-202ENST00000570451 SLC4A9Q96Q91 983 aa28.5■■■□□ 2.15
RPA1-202ENST00000570451 ZNF784Q8NCA9 323 aaPredicted RBP28.49■■■□□ 2.15
RPA1-202ENST00000570451 NFATC2IPQ8NCF5 419 aa28.49■■■□□ 2.15
RPA1-202ENST00000570451 PTCD1O75127 700 aaKnown RBP28.48■■■□□ 2.15
RPA1-202ENST00000570451 DIAPH1O60610 1272 aaKnown RBP28.47■■■□□ 2.15
RPA1-202ENST00000570451 RTCBQ9Y3I0 505 aaKnown RBP28.47■■■□□ 2.15
RPA1-202ENST00000570451 CD2APQ9Y5K6 639 aa28.47■■■□□ 2.15
RPA1-202ENST00000570451 AKAP4Q5JQC9 854 aa28.46■■■□□ 2.15
RPA1-202ENST00000570451 YBX3P16989 372 aaKnown RBP eCLIP28.45■■■□□ 2.145e-7■■□□□ 12.4
RPA1-202ENST00000570451 TRAPPC3LQ5T215 181 aa28.44■■■□□ 2.14
RPA1-202ENST00000570451 ZNF831Q5JPB2 1677 aa28.43■■■□□ 2.14
RPA1-202ENST00000570451 CNTNAP4Q9C0A0 1308 aa28.42■■■□□ 2.14
RPA1-202ENST00000570451 NPC1L1Q9UHC9 1359 aa28.41■■■□□ 2.14
RPA1-202ENST00000570451 GRIN3BO60391 1043 aa28.41■■■□□ 2.14
RPA1-202ENST00000570451 RC3H1Q5TC82 1133 aaKnown RBP28.41■■■□□ 2.14
RPA1-202ENST00000570451 SCN11AQ9UI33 1791 aa28.41■■■□□ 2.14
RPA1-202ENST00000570451 COL5A3P25940 1745 aaPredicted RBP28.4■■■□□ 2.14
RPA1-202ENST00000570451 LGR6Q9HBX8 967 aa28.4■■■□□ 2.14
RPA1-202ENST00000570451 U2SURPO15042 1029 aaKnown RBP28.39■■■□□ 2.14
RPA1-202ENST00000570451 MMP10P09238 476 aa28.39■■■□□ 2.14
RPA1-202ENST00000570451 MTHFSDQ2M296 383 aaKnown RBP28.38■■■□□ 2.13
RPA1-202ENST00000570451 ARHGEF1Q92888 912 aaKnown RBP28.38■■■□□ 2.13
RPA1-202ENST00000570451 SLC52A2Q9HAB3 445 aa28.38■■■□□ 2.13
RPA1-202ENST00000570451 WWC3Q9ULE0 1092 aa28.38■■■□□ 2.13
RPA1-202ENST00000570451 RPS6KA4O75676 772 aa28.37■■■□□ 2.13
RPA1-202ENST00000570451 ADRA2BP18089 450 aa28.37■■■□□ 2.13
RPA1-202ENST00000570451 RFC4P35249 363 aa28.37■■■□□ 2.13
RPA1-202ENST00000570451 RNMTO43148 476 aaKnown RBP28.36■■■□□ 2.13
RPA1-202ENST00000570451 CRKLP46109 303 aaKnown RBP28.36■■■□□ 2.13
RPA1-202ENST00000570451 COL3A1P02461 1466 aaPredicted RBP28.35■■■□□ 2.13
RPA1-202ENST00000570451 MYH14Q7Z406 1995 aaKnown RBP28.34■■■□□ 2.13
RPA1-202ENST00000570451 NLGN1Q8N2Q7 840 aa28.34■■■□□ 2.13
RPA1-202ENST00000570451 SLC39A6Q13433 755 aa28.32■■■□□ 2.12
RPA1-202ENST00000570451 TJP1Q07157 1748 aa28.32■■■□□ 2.12
RPA1-202ENST00000570451 GYS1P13807 737 aa28.31■■■□□ 2.12
RPA1-202ENST00000570451 MRC1P22897 1456 aa28.31■■■□□ 2.12
RPA1-202ENST00000570451 CICQ96RK0 1608 aaPredicted RBP28.31■■■□□ 2.12
RPA1-202ENST00000570451 VIRMAQ69YN4 1812 aaKnown RBP28.29■■■□□ 2.12
RPA1-202ENST00000570451 DNAJC10Q8IXB1 793 aa28.29■■■□□ 2.12
RPA1-202ENST00000570451 CFAP53Q96M91 514 aa28.29■■■□□ 2.12
RPA1-202ENST00000570451 C4AP0C0L4 1744 aa28.29■■■□□ 2.12
RPA1-202ENST00000570451 SRP68Q9UHB9 627 aaKnown RBP28.28■■■□□ 2.12
RPA1-202ENST00000570451 PARP3Q9Y6F1 533 aa28.28■■■□□ 2.12
RPA1-202ENST00000570451 INTS5Q6P9B9 1019 aaKnown RBP28.26■■■□□ 2.11
RPA1-202ENST00000570451 CCDC87Q9NVE4 849 aa28.26■■■□□ 2.11
RPA1-202ENST00000570451 GAS2L2Q8NHY3 880 aa28.25■■■□□ 2.11
RPA1-202ENST00000570451 ADAMTS7Q9UKP4 1686 aa28.24■■■□□ 2.11
RPA1-202ENST00000570451 KCPQ6ZWJ8 1503 aa28.23■■■□□ 2.11
RPA1-202ENST00000570451 USP42Q9H9J4 1324 aaKnown RBP28.23■■■□□ 2.11
RPA1-202ENST00000570451 GNAT3A8MTJ3 354 aa28.23■■■□□ 2.11
RPA1-202ENST00000570451 PXDNLA1KZ92 1463 aa28.22■■■□□ 2.11
RPA1-202ENST00000570451 TEFQ10587 303 aa28.22■■■□□ 2.11
RPA1-202ENST00000570451 C10orf71Q711Q0 1435 aa28.22■■■□□ 2.11
RPA1-202ENST00000570451 TTC5Q8N0Z6 440 aa28.22■■■□□ 2.11
RPA1-202ENST00000570451 A0A0G2JLW4 131 aa28.21■■■□□ 2.11
RPA1-202ENST00000570451 CYP19A1P11511 503 aaPredicted RBP28.21■■■□□ 2.11
RPA1-202ENST00000570451 FKBP8Q14318 412 aa28.21■■■□□ 2.11
RPA1-202ENST00000570451 ZPR1O75312 459 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 GIGYF1O75420 1035 aaPredicted RBP28.2■■■□□ 2.1
RPA1-202ENST00000570451 PPP2R1AP30153 589 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 PRKAR2BP31323 418 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 TGFB2P61812 414 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 NUDCQ9Y266 331 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 KIF13BQ9NQT8 1826 aa28.2■■■□□ 2.1
RPA1-202ENST00000570451 N4BP2Q86UW6 1770 aaPredicted RBP28.19■■■□□ 2.1
RPA1-202ENST00000570451 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
RPA1-202ENST00000570451 IL17REQ8NFR9 667 aa28.18■■■□□ 2.1
RPA1-202ENST00000570451 ATP10DQ9P241 1426 aa28.18■■■□□ 2.1
RPA1-202ENST00000570451 USPL1Q5W0Q7 1092 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 VSIG10Q8N0Z9 540 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 PHACTR3Q96KR7 559 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 RSPH6AQ9H0K4 717 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 BCS1LQ9Y276 419 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 ZBTB1Q9Y2K1 713 aa28.17■■■□□ 2.1
RPA1-202ENST00000570451 U2AF1L5P0DN76 240 aaPredicted RBP28.16■■■□□ 2.1
RPA1-202ENST00000570451 DPEP1P16444 411 aa28.16■■■□□ 2.1
RPA1-202ENST00000570451 C1QTNF8P60827 252 aa28.16■■■□□ 2.1
RPA1-202ENST00000570451 U2AF1Q01081 240 aaKnown RBP eCLIP28.16■■■□□ 2.1
RPA1-202ENST00000570451 KIAA1551Q9HCM1 1747 aa28.15■■■□□ 2.1
RPA1-202ENST00000570451 DDR1Q08345 913 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms