RNA–Protein interactions for RNA: ENST00000570270.1

TAF1C-223, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 3

Gene TAF1C, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-223	ENST00000570270	COL23A1	Q86Y22	540 aa	Predicted RBP	18.37	■□□□□ 0.53
TAF1C-223	ENST00000570270	GAS2L2	Q8NHY3	880 aa		18.37	■□□□□ 0.53
TAF1C-223	ENST00000570270	RBM42	Q9BTD8	480 aa	Known RBP	18.37	■□□□□ 0.53
TAF1C-223	ENST00000570270	TAF1L	Q8IZX4	1826 aa		18.36	■□□□□ 0.53
TAF1C-223	ENST00000570270	NFATC2IP	Q8NCF5	419 aa		18.36	■□□□□ 0.53
TAF1C-223	ENST00000570270	SYT17	Q9BSW7	474 aa		18.36	■□□□□ 0.53
TAF1C-223	ENST00000570270	KDM6A	O15550	1401 aa	Predicted RBP	18.35	■□□□□ 0.53
TAF1C-223	ENST00000570270	MAP3K5	Q99683	1374 aa		18.35	■□□□□ 0.53
TAF1C-223	ENST00000570270	FHDC1	Q9C0D6	1143 aa	Predicted RBP	18.35	■□□□□ 0.53
TAF1C-223	ENST00000570270	PPP2R1A	P30153	589 aa		18.34	■□□□□ 0.53
TAF1C-223	ENST00000570270	RC3H1	Q5TC82	1133 aa	Known RBP	18.34	■□□□□ 0.53
TAF1C-223	ENST00000570270	C4B	P0C0L5	1744 aa		18.34	■□□□□ 0.53
TAF1C-223	ENST00000570270	RNMT	O43148	476 aa	Known RBP	18.33	■□□□□ 0.52
TAF1C-223	ENST00000570270	MTHFSD	Q2M296	383 aa	Known RBP	18.33	■□□□□ 0.52
TAF1C-223	ENST00000570270	SLC52A2	Q9HAB3	445 aa		18.33	■□□□□ 0.52
TAF1C-223	ENST00000570270	RTCB	Q9Y3I0	505 aa	Known RBP	18.33	■□□□□ 0.52
TAF1C-223	ENST00000570270	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	18.32	■□□□□ 0.52
TAF1C-223	ENST00000570270	GNPAT	O15228	680 aa		18.32	■□□□□ 0.52
TAF1C-223	ENST00000570270	NEFM	P07197	916 aa		18.32	■□□□□ 0.52
TAF1C-223	ENST00000570270	LINC00116	Q8NCU8	138 aa		18.32	■□□□□ 0.52
TAF1C-223	ENST00000570270	TUBGCP6	Q96RT7	1819 aa		18.32	■□□□□ 0.52
TAF1C-223	ENST00000570270	COL3A1	P02461	1466 aa	Predicted RBP	18.32	■□□□□ 0.52
TAF1C-223	ENST00000570270	PHF14	O94880	888 aa		18.31	■□□□□ 0.52
TAF1C-223	ENST00000570270	ADRA2B	P18089	450 aa		18.31	■□□□□ 0.52
TAF1C-223	ENST00000570270	ITPK1	Q13572	414 aa		18.31	■□□□□ 0.52
TAF1C-223	ENST00000570270	TRAPPC3L	Q5T215	181 aa		18.31	■□□□□ 0.52
TAF1C-223	ENST00000570270	ZNF831	Q5JPB2	1677 aa		18.31	■□□□□ 0.52
TAF1C-223	ENST00000570270	SCN11A	Q9UI33	1791 aa		18.3	■□□□□ 0.52
TAF1C-223	ENST00000570270	GNAT3	A8MTJ3	354 aa		18.3	■□□□□ 0.52
TAF1C-223	ENST00000570270	FCHSD2	O94868	740 aa		18.3	■□□□□ 0.52
TAF1C-223	ENST00000570270	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.3	■□□□□ 0.52
TAF1C-223	ENST00000570270	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
TAF1C-223	ENST00000570270	KLHL34	Q8N239	644 aa		18.3	■□□□□ 0.52
TAF1C-223	ENST00000570270	CNTNAP4	Q9C0A0	1308 aa		18.29	■□□□□ 0.52
TAF1C-223	ENST00000570270	PTCD1	O75127	700 aa	Known RBP	18.29	■□□□□ 0.52
TAF1C-223	ENST00000570270	TEF	Q10587	303 aa		18.29	■□□□□ 0.52
TAF1C-223	ENST00000570270	PNN	Q9H307	717 aa	Known RBP	18.29	■□□□□ 0.52
TAF1C-223	ENST00000570270	LGR6	Q9HBX8	967 aa		18.29	■□□□□ 0.52
TAF1C-223	ENST00000570270	COL24A1	Q17RW2	1714 aa		18.29	■□□□□ 0.52
TAF1C-223	ENST00000570270	RPS6KA4	O75676	772 aa		18.27	■□□□□ 0.52
TAF1C-223	ENST00000570270	PRKAR2B	P31323	418 aa		18.27	■□□□□ 0.52
TAF1C-223	ENST00000570270	RALBP1	Q15311	655 aa		18.27	■□□□□ 0.52
TAF1C-223	ENST00000570270	MSL1	Q68DK7	614 aa		18.27	■□□□□ 0.52
TAF1C-223	ENST00000570270	TTC5	Q8N0Z6	440 aa		18.27	■□□□□ 0.52
TAF1C-223	ENST00000570270	UBR3	Q6ZT12	1888 aa		18.26	■□□□□ 0.51
TAF1C-223	ENST00000570270	RTF1	Q92541	710 aa	Known RBP	18.26	■□□□□ 0.51
TAF1C-223	ENST00000570270	RFC4	P35249	363 aa		18.25	■□□□□ 0.51
TAF1C-223	ENST00000570270	VSIG10	Q8N0Z9	540 aa		18.25	■□□□□ 0.51
TAF1C-223	ENST00000570270	NLGN1	Q8N2Q7	840 aa		18.25	■□□□□ 0.51
TAF1C-223	ENST00000570270	SLC4A9	Q96Q91	983 aa		18.25	■□□□□ 0.51
TAF1C-223	ENST00000570270	RSPH6A	Q9H0K4	717 aa		18.25	■□□□□ 0.51
TAF1C-223	ENST00000570270	CD2AP	Q9Y5K6	639 aa		18.25	■□□□□ 0.51
TAF1C-223	ENST00000570270	GPR162	Q16538	588 aa		18.24	■□□□□ 0.51
TAF1C-223	ENST00000570270	MRC1	P22897	1456 aa		18.24	■□□□□ 0.51
TAF1C-223	ENST00000570270	YY1	P25490	414 aa		18.23	■□□□□ 0.51
TAF1C-223	ENST00000570270	CRKL	P46109	303 aa	Known RBP	18.23	■□□□□ 0.51
TAF1C-223	ENST00000570270	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.23	■□□□□ 0.51
TAF1C-223	ENST00000570270	HTATSF1	O43719	755 aa	Known RBP	18.22	■□□□□ 0.51
TAF1C-223	ENST00000570270	STARD3NL	O95772	234 aa		18.21	■□□□□ 0.51
TAF1C-223	ENST00000570270	DDX10	Q13206	875 aa	Known RBP	18.21	■□□□□ 0.51
TAF1C-223	ENST00000570270	ARHGEF1	Q92888	912 aa	Known RBP	18.21	■□□□□ 0.51
TAF1C-223	ENST00000570270	ADAMTS7	Q9UKP4	1686 aa		18.2	■□□□□ 0.5
TAF1C-223	ENST00000570270	GRIN3B	O60391	1043 aa		18.2	■□□□□ 0.5
TAF1C-223	ENST00000570270	SLC39A6	Q13433	755 aa		18.2	■□□□□ 0.5
TAF1C-223	ENST00000570270	AMIGO3	Q86WK7	504 aa		18.2	■□□□□ 0.5
TAF1C-223	ENST00000570270	IL17RE	Q8NFR9	667 aa		18.2	■□□□□ 0.5
TAF1C-223	ENST00000570270	PHACTR3	Q96KR7	559 aa		18.2	■□□□□ 0.5
TAF1C-223	ENST00000570270	CCDC87	Q9NVE4	849 aa		18.2	■□□□□ 0.5
TAF1C-223	ENST00000570270	VIRMA	Q69YN4	1812 aa	Known RBP	18.2	■□□□□ 0.5
TAF1C-223	ENST00000570270	COL5A3	P25940	1745 aa	Predicted RBP	18.19	■□□□□ 0.5
TAF1C-223	ENST00000570270	ZNF790	Q6PG37	636 aa		18.19	■□□□□ 0.5
TAF1C-223	ENST00000570270	ZPR1	O75312	459 aa		18.18	■□□□□ 0.5
TAF1C-223	ENST00000570270	NPM2	Q86SE8	214 aa	Known RBP	18.18	■□□□□ 0.5
TAF1C-223	ENST00000570270	DNAJC10	Q8IXB1	793 aa		18.18	■□□□□ 0.5
TAF1C-223	ENST00000570270	PELP1	Q8IZL8	1130 aa	Known RBP	18.18	■□□□□ 0.5
TAF1C-223	ENST00000570270	FMNL2	Q96PY5	1086 aa		18.18	■□□□□ 0.5
TAF1C-223	ENST00000570270	CIC	Q96RK0	1608 aa	Predicted RBP	18.18	■□□□□ 0.5
TAF1C-223	ENST00000570270	CEMIP	Q8WUJ3	1361 aa		18.17	■□□□□ 0.5
TAF1C-223	ENST00000570270	BTBD11	A6QL63	1104 aa		18.17	■□□□□ 0.5
TAF1C-223	ENST00000570270	MMP10	P09238	476 aa		18.17	■□□□□ 0.5
TAF1C-223	ENST00000570270	SMIM5	Q71RC9	77 aa		18.17	■□□□□ 0.5
TAF1C-223	ENST00000570270	PARP3	Q9Y6F1	533 aa		18.17	■□□□□ 0.5
TAF1C-223	ENST00000570270	CYP19A1	P11511	503 aa	Predicted RBP	18.16	■□□□□ 0.5
TAF1C-223	ENST00000570270	MAPK8IP3	Q9UPT6	1336 aa		18.16	■□□□□ 0.5
TAF1C-223	ENST00000570270	MYH14	Q7Z406	1995 aa	Known RBP	18.15	■□□□□ 0.5
TAF1C-223	ENST00000570270		A0A087WZG4	1122 aa		18.15	■□□□□ 0.5
TAF1C-223	ENST00000570270	GYS1	P13807	737 aa		18.15	■□□□□ 0.5
TAF1C-223	ENST00000570270	INTS5	Q6P9B9	1019 aa	Known RBP	18.15	■□□□□ 0.5
TAF1C-223	ENST00000570270	NLGN2	Q8NFZ4	835 aa		18.15	■□□□□ 0.5
TAF1C-223	ENST00000570270	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.15	■□□□□ 0.5
TAF1C-223	ENST00000570270	HEG1	Q9ULI3	1381 aa		18.14	■□□□□ 0.49
TAF1C-223	ENST00000570270	TJP1	Q07157	1748 aa		18.13	■□□□□ 0.49
TAF1C-223	ENST00000570270	TGFB2	P61812	414 aa		18.13	■□□□□ 0.49
TAF1C-223	ENST00000570270	PNISR	Q8TF01	805 aa	Known RBP	18.13	■□□□□ 0.49
TAF1C-223	ENST00000570270	SOS1	Q07889	1333 aa	Predicted RBP	18.13	■□□□□ 0.49
TAF1C-223	ENST00000570270	USP42	Q9H9J4	1324 aa	Known RBP	18.13	■□□□□ 0.49
TAF1C-223	ENST00000570270	KCP	Q6ZWJ8	1503 aa		18.13	■□□□□ 0.49
TAF1C-223	ENST00000570270	CHD4	Q14839	1912 aa		18.12	■□□□□ 0.49
TAF1C-223	ENST00000570270	ZNF496	Q96IT1	587 aa	Predicted RBP	18.12	■□□□□ 0.49
TAF1C-223	ENST00000570270	TAF7	Q15545	349 aa	Predicted RBP	18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms