RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 NBPF4Q96M43 638 aa14.51□□□□□ -0.09
TCF4-244ENST00000570146 A0A1W2PP64 1363 aa14.5□□□□□ -0.09
TCF4-244ENST00000570146 GNPATO15228 680 aa14.5□□□□□ -0.09
TCF4-244ENST00000570146 HTRA3P83110 453 aa14.5□□□□□ -0.09
TCF4-244ENST00000570146 C9orf131Q5VYM1 1079 aa14.5□□□□□ -0.09
TCF4-244ENST00000570146 NLGN1Q8N2Q7 840 aa14.5□□□□□ -0.09
TCF4-244ENST00000570146 PUS7Q96PZ0 661 aaKnown RBP14.5□□□□□ -0.09
TCF4-244ENST00000570146 LOC102724428A0A0B4J2F2 783 aa14.49□□□□□ -0.09
TCF4-244ENST00000570146 A0A0G2JLW4 131 aa14.49□□□□□ -0.09
TCF4-244ENST00000570146 SIK1P57059 783 aa14.49□□□□□ -0.09
TCF4-244ENST00000570146 USHBP1Q8N6Y0 703 aa14.49□□□□□ -0.09
TCF4-244ENST00000570146 SMC1BQ8NDV3 1235 aa14.49□□□□□ -0.09
TCF4-244ENST00000570146 CCDC87Q9NVE4 849 aa14.49□□□□□ -0.09
TCF4-244ENST00000570146 PXDNLA1KZ92 1463 aa14.49□□□□□ -0.09
TCF4-244ENST00000570146 C4BP0C0L5 1744 aa14.49□□□□□ -0.09
TCF4-244ENST00000570146 ATXN8OSP0DMR3 200 aa14.48□□□□□ -0.09
TCF4-244ENST00000570146 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
TCF4-244ENST00000570146 TMF1P82094 1093 aa14.48□□□□□ -0.09
TCF4-244ENST00000570146 AMIGO3Q86WK7 504 aa14.48□□□□□ -0.09
TCF4-244ENST00000570146 WDR90Q96KV7 1748 aa14.47□□□□□ -0.09
TCF4-244ENST00000570146 CARD11Q9BXL7 1154 aa14.47□□□□□ -0.09
TCF4-244ENST00000570146 ATP6V1AP38606 617 aa14.46□□□□□ -0.09
TCF4-244ENST00000570146 TRAPPC3LQ5T215 181 aa14.46□□□□□ -0.09
TCF4-244ENST00000570146 SMIM5Q71RC9 77 aa14.46□□□□□ -0.09
TCF4-244ENST00000570146 LINC00116Q8NCU8 138 aa14.46□□□□□ -0.09
TCF4-244ENST00000570146 PIGBQ92521 554 aa14.46□□□□□ -0.09
TCF4-244ENST00000570146 TMOD3Q9NYL9 352 aa14.46□□□□□ -0.09
TCF4-244ENST00000570146 RTCBQ9Y3I0 505 aaKnown RBP14.46□□□□□ -0.09
TCF4-244ENST00000570146 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
TCF4-244ENST00000570146 HSPA1AP0DMV8 641 aaKnown RBP14.45□□□□□ -0.1
TCF4-244ENST00000570146 HSPA1BP0DMV9 641 aaKnown RBP14.45□□□□□ -0.1
TCF4-244ENST00000570146 DPEP1P16444 411 aa14.45□□□□□ -0.1
TCF4-244ENST00000570146 RRAGCQ9HB90 399 aa14.45□□□□□ -0.1
TCF4-244ENST00000570146 RNF181Q9P0P0 153 aa14.45□□□□□ -0.1
TCF4-244ENST00000570146 SPG7Q9UQ90 795 aa14.45□□□□□ -0.1
TCF4-244ENST00000570146 PARP3Q9Y6F1 533 aa14.45□□□□□ -0.1
TCF4-244ENST00000570146 CYP27B1O15528 508 aa14.44□□□□□ -0.1
TCF4-244ENST00000570146 RRS1Q15050 365 aaKnown RBP14.44□□□□□ -0.1
TCF4-244ENST00000570146 PIM2Q9P1W9 311 aa14.44□□□□□ -0.1
TCF4-244ENST00000570146 C10orf71Q711Q0 1435 aa14.43□□□□□ -0.1
TCF4-244ENST00000570146 FBLN1P23142 703 aa14.43□□□□□ -0.1
TCF4-244ENST00000570146 DALRD3Q5D0E6 543 aaKnown RBP14.43□□□□□ -0.1
TCF4-244ENST00000570146 RFC4P35249 363 aa14.42□□□□□ -0.1
TCF4-244ENST00000570146 NKX1-1Q15270 411 aaPredicted RBP14.42□□□□□ -0.1
TCF4-244ENST00000570146 HAX1O00165 279 aa14.41□□□□□ -0.1
TCF4-244ENST00000570146 NEUROD1Q13562 356 aa14.41□□□□□ -0.1
TCF4-244ENST00000570146 INSRP06213 1382 aa14.41□□□□□ -0.1
TCF4-244ENST00000570146 KCPQ6ZWJ8 1503 aa14.41□□□□□ -0.1
TCF4-244ENST00000570146 ZC3H4Q9UPT8 1303 aaKnown RBP14.41□□□□□ -0.1
TCF4-244ENST00000570146 FLT4P35916 1363 aa14.4□□□□□ -0.1
TCF4-244ENST00000570146 ITPK1Q13572 414 aa14.4□□□□□ -0.1
TCF4-244ENST00000570146 HSP90AB2PQ58FF8 381 aa14.4□□□□□ -0.1
TCF4-244ENST00000570146 DCAF5Q96JK2 942 aa14.4□□□□□ -0.1
TCF4-244ENST00000570146 ASAP1Q9ULH1 1129 aa14.4□□□□□ -0.1
TCF4-244ENST00000570146 TAF1LQ8IZX4 1826 aa14.4□□□□□ -0.1
TCF4-244ENST00000570146 KIF24Q5T7B8 1368 aa14.39□□□□□ -0.11
TCF4-244ENST00000570146 VEGFAP15692 232 aaPredicted RBP14.39□□□□□ -0.11
TCF4-244ENST00000570146 TOGARAM1Q9Y4F4 1720 aa14.38□□□□□ -0.11
TCF4-244ENST00000570146 UBR3Q6ZT12 1888 aa14.38□□□□□ -0.11
TCF4-244ENST00000570146 ARHGEF1Q92888 912 aaKnown RBP14.38□□□□□ -0.11
TCF4-244ENST00000570146 SPDYE2BA6NHP3 402 aa14.37□□□□□ -0.11
TCF4-244ENST00000570146 SPDYE6P0CI01 402 aa14.37□□□□□ -0.11
TCF4-244ENST00000570146 GYS1P13807 737 aa14.37□□□□□ -0.11
TCF4-244ENST00000570146 KCNA3P22001 575 aa14.37□□□□□ -0.11
TCF4-244ENST00000570146 SPDYE2Q495Y8 402 aa14.37□□□□□ -0.11
TCF4-244ENST00000570146 RC3H1Q5TC82 1133 aaKnown RBP14.37□□□□□ -0.11
TCF4-244ENST00000570146 IFNL2Q8IZJ0 200 aa14.37□□□□□ -0.11
TCF4-244ENST00000570146 SIN3AQ96ST3 1273 aa14.37□□□□□ -0.11
TCF4-244ENST00000570146 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
TCF4-244ENST00000570146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.11
TCF4-244ENST00000570146 FYB1O15117 783 aa14.36□□□□□ -0.11
TCF4-244ENST00000570146 SLC34A2O95436 690 aa14.36□□□□□ -0.11
TCF4-244ENST00000570146 ATG3Q9NT62 314 aa14.36□□□□□ -0.11
TCF4-244ENST00000570146 GLTPD2A6NH11 291 aa14.34□□□□□ -0.11
TCF4-244ENST00000570146 RPS6KA4O75676 772 aa14.34□□□□□ -0.11
TCF4-244ENST00000570146 LMNB1P20700 586 aa14.34□□□□□ -0.11
TCF4-244ENST00000570146 CNTNAP4Q9C0A0 1308 aa14.34□□□□□ -0.11
TCF4-244ENST00000570146 KIF13BQ9NQT8 1826 aa14.34□□□□□ -0.11
TCF4-244ENST00000570146 RGPD2P0DJD1 1756 aa14.33□□□□□ -0.12
TCF4-244ENST00000570146 PPM1GO15355 546 aaPredicted RBP14.33□□□□□ -0.12
TCF4-244ENST00000570146 N4BP2Q86UW6 1770 aaPredicted RBP14.32□□□□□ -0.12
TCF4-244ENST00000570146 PHKG2P15735 406 aa14.32□□□□□ -0.12
TCF4-244ENST00000570146 AIDAQ96BJ3 306 aa14.32□□□□□ -0.12
TCF4-244ENST00000570146 TNRC6CQ9HCJ0 1690 aaKnown RBP14.32□□□□□ -0.12
TCF4-244ENST00000570146 C4AP0C0L4 1744 aa14.32□□□□□ -0.12
TCF4-244ENST00000570146 ERVV-2B6SEH9 535 aa14.31□□□□□ -0.12
TCF4-244ENST00000570146 HSP90AB1P08238 724 aaKnown RBP14.31□□□□□ -0.12
TCF4-244ENST00000570146 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
TCF4-244ENST00000570146 CREBZFQ9NS37 354 aa14.31□□□□□ -0.12
TCF4-244ENST00000570146 CHRNA5P30532 468 aa14.3□□□□□ -0.12
TCF4-244ENST00000570146 PRDM10Q9NQV6 1147 aa14.3□□□□□ -0.12
TCF4-244ENST00000570146 KIAA1551Q9HCM1 1747 aa14.29□□□□□ -0.12
TCF4-244ENST00000570146 PCDH10Q9P2E7 1040 aa14.29□□□□□ -0.12
TCF4-244ENST00000570146 KDRP35968 1356 aa14.29□□□□□ -0.12
TCF4-244ENST00000570146 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
TCF4-244ENST00000570146 PKD1L3Q7Z443 1732 aa14.29□□□□□ -0.12
TCF4-244ENST00000570146 ITGB4P16144 1822 aa14.29□□□□□ -0.12
TCF4-244ENST00000570146 ST20-MTHFSA0A0A6YYL1 179 aa14.28□□□□□ -0.12
TCF4-244ENST00000570146 MAP2P11137 1827 aaKnown RBP14.28□□□□□ -0.12
TCF4-244ENST00000570146 RASSF7Q02833 373 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms