RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ZBTB7BO15156 539 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-221ENST00000569924 C21orf2O43822 256 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 PRMT3O60678 531 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 SEC13P55735 322 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 SF3A1Q15459 793 aaKnown RBP4.72□□□□□ -1.65
CNOT1-221ENST00000569924 ECM1Q16610 540 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 OCLNQ16625 522 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 FAM98CQ17RN3 349 aaKnown RBP4.72□□□□□ -1.65
CNOT1-221ENST00000569924 PDXDC2PQ6P474 469 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 SAMD7Q7Z3H4 446 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 GLYCTKQ8IVS8 523 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 AFAP1Q8N556 730 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 USB1Q9BQ65 265 aaKnown RBP4.72□□□□□ -1.65
CNOT1-221ENST00000569924 TUT1Q9H6E5 874 aaKnown RBP4.72□□□□□ -1.65
CNOT1-221ENST00000569924 MAP10Q9P2G4 905 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 SEPT9Q9UHD8 586 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-221ENST00000569924 DCTN4Q9UJW0 460 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 PCDHB9Q9Y5E1 797 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 DIP2CQ9Y2E4 1556 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 STRCQ7RTU9 1775 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 UHRF1BP1Q6BDS2 1440 aa4.72□□□□□ -1.65
CNOT1-221ENST00000569924 SMARCA5O60264 1052 aaPredicted RBP4.71□□□□□ -1.66
CNOT1-221ENST00000569924 CEBPAP49715 358 aaPredicted RBP4.71□□□□□ -1.66
CNOT1-221ENST00000569924 FKBP4Q02790 459 aaKnown RBP eCLIP4.71□□□□□ -1.66
CNOT1-221ENST00000569924 ZNF211Q13398 564 aaPredicted RBP4.71□□□□□ -1.66
CNOT1-221ENST00000569924 PTPRNQ16849 979 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 TSNAXIP1Q2TAA8 658 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 PUS10Q3MIT2 529 aaKnown RBP4.71□□□□□ -1.66
CNOT1-221ENST00000569924 TSGA10IPQ3SY00 556 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 ARMC2Q8NEN0 867 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 GPKOWQ92917 476 aaPredicted RBP eCLIP4.71□□□□□ -1.66
CNOT1-221ENST00000569924 PRIMPOLQ96LW4 560 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 SLC4A5Q9BY07 1137 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 ANO2Q9NQ90 1003 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 SALL2Q9Y467 1007 aaPredicted RBP4.71□□□□□ -1.66
CNOT1-221ENST00000569924 LRRIQ1Q96JM4 1722 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 CDC42BPBQ9Y5S2 1711 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 PREX2Q70Z35 1606 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 ABCA6Q8N139 1617 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 ABCC1P33527 1531 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 PTPRTO14522 1441 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 CNTLNQ9NXG0 1405 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 TRAPPC8Q9Y2L5 1435 aa4.71□□□□□ -1.66
CNOT1-221ENST00000569924 CCDC18Q5T9S5 1454 aa4.7□□□□□ -1.66
CNOT1-221ENST00000569924 ACTN4O43707 911 aaKnown RBP4.7□□□□□ -1.66
CNOT1-221ENST00000569924 SF3B2Q13435 895 aaKnown RBP4.7□□□□□ -1.66
CNOT1-221ENST00000569924 EAPPQ56P03 285 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-221ENST00000569924 BRICD5Q6PL45 260 aa4.7□□□□□ -1.66
CNOT1-221ENST00000569924 POTEGQ6S5H5 508 aa4.7□□□□□ -1.66
CNOT1-221ENST00000569924 RNF19BQ6ZMZ0 732 aa4.7□□□□□ -1.66
CNOT1-221ENST00000569924 GTF3C2Q8WUA4 911 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-221ENST00000569924 OCSTAMPQ9BR26 566 aa4.7□□□□□ -1.66
CNOT1-221ENST00000569924 PCDH10Q9P2E7 1040 aa4.7□□□□□ -1.66
CNOT1-221ENST00000569924 PPP1R1BQ9UD71 204 aaPredicted RBP4.7□□□□□ -1.66
CNOT1-221ENST00000569924 RBM19Q9Y4C8 960 aaKnown RBP4.7□□□□□ -1.66
CNOT1-221ENST00000569924 CASKIN1Q8WXD9 1431 aa4.7□□□□□ -1.66
CNOT1-221ENST00000569924 C3P01024 1663 aa4.7□□□□□ -1.66
CNOT1-221ENST00000569924 ITSN2Q9NZM3 1697 aa4.7□□□□□ -1.66
CNOT1-221ENST00000569924 IQSEC2Q5JU85 1478 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 PPM1GO15355 546 aaPredicted RBP4.69□□□□□ -1.66
CNOT1-221ENST00000569924 JUNDP17535 347 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 ERCC5P28715 1186 aaPredicted RBP4.69□□□□□ -1.66
CNOT1-221ENST00000569924 CTHP32929 405 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 ARHGAP4P98171 946 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 CCDC102BQ68D86 513 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 BLOC1S3Q6QNY0 202 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 LAPTM4BQ86VI4 370 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 RGL4Q8IZJ4 473 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 BACH2Q9BYV9 841 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 KIAA1024Q9UPX6 916 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 DNMT3AQ9Y6K1 912 aaPredicted RBP4.69□□□□□ -1.66
CNOT1-221ENST00000569924 NPATQ14207 1427 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 NCOA1Q15788 1441 aa4.69□□□□□ -1.66
CNOT1-221ENST00000569924 KIDINS220Q9ULH0 1771 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 MROH2AA6NES4 1674 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 SCAMP3O14828 347 aaKnown RBP4.68□□□□□ -1.66
CNOT1-221ENST00000569924 RNF40O75150 1001 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 GTF2IP78347 998 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 MRPL58Q14197 206 aaKnown RBP4.68□□□□□ -1.66
CNOT1-221ENST00000569924 ESF1Q9H501 851 aaKnown RBP4.68□□□□□ -1.66
CNOT1-221ENST00000569924 EVA1BQ9NVM1 165 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 SEPT3Q9UH03 358 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 DOLKQ9UPQ8 538 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 SAMD9LQ8IVG5 1584 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 CDC42BPAQ5VT25 1732 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 FYCO1Q9BQS8 1478 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 LTBP4Q8N2S1 1624 aa4.68□□□□□ -1.66
CNOT1-221ENST00000569924 KIAA1107Q9UPP5 1409 aa4.67□□□□□ -1.66
CNOT1-221ENST00000569924 SFI1A8K8P3 1242 aa4.67□□□□□ -1.66
CNOT1-221ENST00000569924 FMNL1O95466 1100 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-221ENST00000569924 HOXB1P14653 301 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-221ENST00000569924 PSEN2P49810 448 aa4.67□□□□□ -1.66
CNOT1-221ENST00000569924 HDLBPQ00341 1268 aaKnown RBP4.67□□□□□ -1.66
CNOT1-221ENST00000569924 NBPF14Q5TI25 921 aa4.67□□□□□ -1.66
CNOT1-221ENST00000569924 ADAM32Q8TC27 787 aa4.67□□□□□ -1.66
CNOT1-221ENST00000569924 CCDC85AQ96PX6 553 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-221ENST00000569924 HINFPQ9BQA5 517 aa4.67□□□□□ -1.66
CNOT1-221ENST00000569924 PRR14Q9BWN1 585 aa4.67□□□□□ -1.66
CNOT1-221ENST00000569924 PCDHGA11Q9Y5H2 935 aa4.67□□□□□ -1.66
CNOT1-221ENST00000569924 PLEKHH2Q8IVE3 1493 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms