RNA–Protein interactions for RNA: ENST00000569637.6

NIP7-208, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 2 BASIC

Gene NIP7, Length 1,099 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-208ENST00000569637 AKAP4Q5JQC9 854 aa19.91■□□□□ 0.78
NIP7-208ENST00000569637 FLAD1Q8NFF5 587 aa19.91■□□□□ 0.78
NIP7-208ENST00000569637 AK7Q96M32 723 aa19.91■□□□□ 0.78
NIP7-208ENST00000569637 CFAP53Q96M91 514 aa19.91■□□□□ 0.78
NIP7-208ENST00000569637 CICQ96RK0 1608 aaPredicted RBP19.91■□□□□ 0.78
NIP7-208ENST00000569637 POLD1P28340 1107 aa19.9■□□□□ 0.78
NIP7-208ENST00000569637 ATP6V1AP38606 617 aa19.9■□□□□ 0.78
NIP7-208ENST00000569637 COL23A1Q86Y22 540 aaPredicted RBP19.9■□□□□ 0.78
NIP7-208ENST00000569637 ARXQ96QS3 562 aa19.9■□□□□ 0.78
NIP7-208ENST00000569637 U2SURPO15042 1029 aaKnown RBP19.89■□□□□ 0.77
NIP7-208ENST00000569637 MRC1P22897 1456 aa19.89■□□□□ 0.77
NIP7-208ENST00000569637 DCAF8L1A6NGE4 600 aa19.88■□□□□ 0.77
NIP7-208ENST00000569637 LINC00116Q8NCU8 138 aa19.88■□□□□ 0.77
NIP7-208ENST00000569637 FHDC1Q9C0D6 1143 aaPredicted RBP19.88■□□□□ 0.77
NIP7-208ENST00000569637 MAP3K5Q99683 1374 aa19.87■□□□□ 0.77
NIP7-208ENST00000569637 TJP1Q07157 1748 aa19.87■□□□□ 0.77
NIP7-208ENST00000569637 PPP2R1AP30153 589 aa19.86■□□□□ 0.77
NIP7-208ENST00000569637 ITPK1Q13572 414 aa19.86■□□□□ 0.77
NIP7-208ENST00000569637 NFATC2IPQ8NCF5 419 aa19.86■□□□□ 0.77
NIP7-208ENST00000569637 SYT17Q9BSW7 474 aa19.86■□□□□ 0.77
NIP7-208ENST00000569637 RBM42Q9BTD8 480 aaKnown RBP19.86■□□□□ 0.77
NIP7-208ENST00000569637 SSFA2P28290 1259 aa19.85■□□□□ 0.77
NIP7-208ENST00000569637 MTHFSDQ2M296 383 aaKnown RBP19.85■□□□□ 0.77
NIP7-208ENST00000569637 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
NIP7-208ENST00000569637 SIPA1L3O60292 1781 aaPredicted RBP19.83■□□□□ 0.77
NIP7-208ENST00000569637 GNPATO15228 680 aa19.83■□□□□ 0.77
NIP7-208ENST00000569637 PHF14O94880 888 aa19.83■□□□□ 0.77
NIP7-208ENST00000569637 SLC52A2Q9HAB3 445 aa19.83■□□□□ 0.77
NIP7-208ENST00000569637 MYH14Q7Z406 1995 aaKnown RBP19.83■□□□□ 0.76
NIP7-208ENST00000569637 UBR2Q8IWV8 1755 aa19.83■□□□□ 0.76
NIP7-208ENST00000569637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.82■□□□□ 0.76
NIP7-208ENST00000569637 RNMTO43148 476 aaKnown RBP19.82■□□□□ 0.76
NIP7-208ENST00000569637 C4AP0C0L4 1744 aa19.82■□□□□ 0.76
NIP7-208ENST00000569637 MSL1Q68DK7 614 aa19.81■□□□□ 0.76
NIP7-208ENST00000569637 AMIGO3Q86WK7 504 aa19.81■□□□□ 0.76
NIP7-208ENST00000569637 GAS2L2Q8NHY3 880 aa19.81■□□□□ 0.76
NIP7-208ENST00000569637 SLC4A9Q96Q91 983 aa19.81■□□□□ 0.76
NIP7-208ENST00000569637 LGR6Q9HBX8 967 aa19.81■□□□□ 0.76
NIP7-208ENST00000569637 CNTNAP4Q9C0A0 1308 aa19.8■□□□□ 0.76
NIP7-208ENST00000569637 PTCD1O75127 700 aaKnown RBP19.8■□□□□ 0.76
NIP7-208ENST00000569637 KLHL34Q8N239 644 aa19.8■□□□□ 0.76
NIP7-208ENST00000569637 RC3H1Q5TC82 1133 aaKnown RBP19.79■□□□□ 0.76
NIP7-208ENST00000569637 PRKAR2BP31323 418 aa19.78■□□□□ 0.76
NIP7-208ENST00000569637 RSPH6AQ9H0K4 717 aa19.78■□□□□ 0.76
NIP7-208ENST00000569637 RTCBQ9Y3I0 505 aaKnown RBP19.78■□□□□ 0.76
NIP7-208ENST00000569637 CHD4Q14839 1912 aa19.78■□□□□ 0.76
NIP7-208ENST00000569637 KCPQ6ZWJ8 1503 aa19.77■□□□□ 0.76
NIP7-208ENST00000569637 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.76
NIP7-208ENST00000569637 U2AF1L5P0DN76 240 aaPredicted RBP19.77■□□□□ 0.76
NIP7-208ENST00000569637 U2AF1Q01081 240 aaKnown RBP eCLIP19.77■□□□□ 0.76
NIP7-208ENST00000569637 ADRA2BP18089 450 aa19.76■□□□□ 0.75
NIP7-208ENST00000569637 SMIM5Q71RC9 77 aa19.76■□□□□ 0.75
NIP7-208ENST00000569637 FCHSD2O94868 740 aa19.75■□□□□ 0.75
NIP7-208ENST00000569637 TRAPPC3LQ5T215 181 aa19.75■□□□□ 0.75
NIP7-208ENST00000569637 DLG5Q8TDM6 1919 aa19.74■□□□□ 0.75
NIP7-208ENST00000569637 RPS6KA4O75676 772 aa19.73■□□□□ 0.75
NIP7-208ENST00000569637 CRKLP46109 303 aaKnown RBP19.73■□□□□ 0.75
NIP7-208ENST00000569637 TEFQ10587 303 aa19.73■□□□□ 0.75
NIP7-208ENST00000569637 SLC39A6Q13433 755 aa19.73■□□□□ 0.75
NIP7-208ENST00000569637 PHACTR3Q96KR7 559 aa19.73■□□□□ 0.75
NIP7-208ENST00000569637 TTC5Q8N0Z6 440 aa19.72■□□□□ 0.75
NIP7-208ENST00000569637 KIF13BQ9NQT8 1826 aa19.72■□□□□ 0.75
NIP7-208ENST00000569637 CEMIPQ8WUJ3 1361 aa19.71■□□□□ 0.75
NIP7-208ENST00000569637 RALBP1Q15311 655 aa19.71■□□□□ 0.75
NIP7-208ENST00000569637 IL17REQ8NFR9 667 aa19.71■□□□□ 0.75
NIP7-208ENST00000569637 CD2APQ9Y5K6 639 aa19.71■□□□□ 0.75
NIP7-208ENST00000569637 YY1P25490 414 aa19.7■□□□□ 0.74
NIP7-208ENST00000569637 RFC4P35249 363 aa19.7■□□□□ 0.74
NIP7-208ENST00000569637 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
NIP7-208ENST00000569637 VSIG10Q8N0Z9 540 aa19.7■□□□□ 0.74
NIP7-208ENST00000569637 NLGN2Q8NFZ4 835 aa19.7■□□□□ 0.74
NIP7-208ENST00000569637 ARHGEF1Q92888 912 aaKnown RBP19.7■□□□□ 0.74
NIP7-208ENST00000569637 GPR162Q16538 588 aa19.69■□□□□ 0.74
NIP7-208ENST00000569637 DNAJC10Q8IXB1 793 aa19.69■□□□□ 0.74
NIP7-208ENST00000569637 NEFMP07197 916 aa19.68■□□□□ 0.74
NIP7-208ENST00000569637 NLGN1Q8N2Q7 840 aa19.68■□□□□ 0.74
NIP7-208ENST00000569637 CCDC87Q9NVE4 849 aa19.68■□□□□ 0.74
NIP7-208ENST00000569637 ZNF790Q6PG37 636 aa19.67■□□□□ 0.74
NIP7-208ENST00000569637 RTF1Q92541 710 aaKnown RBP19.67■□□□□ 0.74
NIP7-208ENST00000569637 MMP10P09238 476 aa19.66■□□□□ 0.74
NIP7-208ENST00000569637 CYP19A1P11511 503 aaPredicted RBP19.66■□□□□ 0.74
NIP7-208ENST00000569637 INTS5Q6P9B9 1019 aaKnown RBP19.66■□□□□ 0.74
NIP7-208ENST00000569637 GYS1P13807 737 aa19.65■□□□□ 0.74
NIP7-208ENST00000569637 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
NIP7-208ENST00000569637 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
NIP7-208ENST00000569637 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
NIP7-208ENST00000569637 HTATSF1O43719 755 aaKnown RBP19.64■□□□□ 0.73
NIP7-208ENST00000569637 PNNQ9H307 717 aaKnown RBP19.64■□□□□ 0.73
NIP7-208ENST00000569637 SOS1Q07889 1333 aaPredicted RBP19.64■□□□□ 0.73
NIP7-208ENST00000569637 MYBBP1AQ9BQG0 1328 aaKnown RBP19.64■□□□□ 0.73
NIP7-208ENST00000569637 USP42Q9H9J4 1324 aaKnown RBP19.64■□□□□ 0.73
NIP7-208ENST00000569637 KIAA1551Q9HCM1 1747 aa19.64■□□□□ 0.73
NIP7-208ENST00000569637 N4BP2Q86UW6 1770 aaPredicted RBP19.63■□□□□ 0.73
NIP7-208ENST00000569637 COL15A1P39059 1388 aa19.63■□□□□ 0.73
NIP7-208ENST00000569637 BTBD11A6QL63 1104 aa19.63■□□□□ 0.73
NIP7-208ENST00000569637 ZNF496Q96IT1 587 aaPredicted RBP19.63■□□□□ 0.73
NIP7-208ENST00000569637 TEX13AQ9BXU3 409 aaPredicted RBP19.63■□□□□ 0.73
NIP7-208ENST00000569637 STARD3NLO95772 234 aa19.62■□□□□ 0.73
NIP7-208ENST00000569637 MCM10Q7L590 875 aa19.62■□□□□ 0.73
NIP7-208ENST00000569637 FMNL2Q96PY5 1086 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms