RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CANXP27824 592 aaKnown RBP9.83□□□□□ -0.84
CDH13-214ENST00000569455 RARSP54136 660 aaKnown RBP9.83□□□□□ -0.84
CDH13-214ENST00000569455 C1QTNF8P60827 252 aa9.83□□□□□ -0.84
CDH13-214ENST00000569455 FAM98CQ17RN3 349 aaKnown RBP9.83□□□□□ -0.84
CDH13-214ENST00000569455 AKAP4Q5JQC9 854 aa9.83□□□□□ -0.84
CDH13-214ENST00000569455 BABAM1Q9NWV8 329 aa9.83□□□□□ -0.84
CDH13-214ENST00000569455 PPP4R2Q9NY27 417 aa9.83□□□□□ -0.84
CDH13-214ENST00000569455 SPG7Q9UQ90 795 aa9.83□□□□□ -0.84
CDH13-214ENST00000569455 OVOS2A0A0G2JMS6 1433 aa9.82□□□□□ -0.84
CDH13-214ENST00000569455 ALDH1L2Q3SY69 923 aa9.82□□□□□ -0.84
CDH13-214ENST00000569455 USP35Q9P2H5 1018 aa9.82□□□□□ -0.84
CDH13-214ENST00000569455 PPP1R1BQ9UD71 204 aaPredicted RBP9.82□□□□□ -0.84
CDH13-214ENST00000569455 BCL9O00512 1426 aa9.82□□□□□ -0.84
CDH13-214ENST00000569455 A0A0G2JS52 829 aa9.81□□□□□ -0.84
CDH13-214ENST00000569455 EXOC5O00471 708 aa9.81□□□□□ -0.84
CDH13-214ENST00000569455 BCAR3O75815 825 aa9.81□□□□□ -0.84
CDH13-214ENST00000569455 MS4A1P11836 297 aa9.81□□□□□ -0.84
CDH13-214ENST00000569455 MYT1Q01538 1121 aa9.81□□□□□ -0.84
CDH13-214ENST00000569455 DDB1Q16531 1140 aa9.81□□□□□ -0.84
CDH13-214ENST00000569455 TSPYL4Q9UJ04 414 aa9.81□□□□□ -0.84
CDH13-214ENST00000569455 MEGF6O75095 1541 aa9.81□□□□□ -0.84
CDH13-214ENST00000569455 SCN11AQ9UI33 1791 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 CEMIPQ8WUJ3 1361 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 PLIN1O60240 522 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 HSP90AB1P08238 724 aaKnown RBP9.8□□□□□ -0.84
CDH13-214ENST00000569455 TEFQ10587 303 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 PDE3AQ14432 1141 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 TAF7Q15545 349 aaPredicted RBP9.8□□□□□ -0.84
CDH13-214ENST00000569455 EZH2Q15910 746 aaKnown RBP9.8□□□□□ -0.84
CDH13-214ENST00000569455 TWISTNBQ3B726 338 aaPredicted RBP9.8□□□□□ -0.84
CDH13-214ENST00000569455 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
CDH13-214ENST00000569455 IL17REQ8NFR9 667 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 SMC4Q9NTJ3 1288 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 RREB1Q92766 1687 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 ADAMTS7Q9UKP4 1686 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 SOS1Q07889 1333 aaPredicted RBP9.8□□□□□ -0.84
CDH13-214ENST00000569455 KIF16BQ96L93 1317 aa9.8□□□□□ -0.84
CDH13-214ENST00000569455 KDM3BQ7LBC6 1761 aa9.79□□□□□ -0.84
CDH13-214ENST00000569455 IPO8O15397 1037 aaKnown RBP9.79□□□□□ -0.84
CDH13-214ENST00000569455 VAMP4O75379 141 aa9.79□□□□□ -0.84
CDH13-214ENST00000569455 ZKSCAN2Q63HK3 967 aa9.79□□□□□ -0.84
CDH13-214ENST00000569455 FAM196AQ6ZSG2 479 aa9.79□□□□□ -0.84
CDH13-214ENST00000569455 IFNL2Q8IZJ0 200 aa9.79□□□□□ -0.84
CDH13-214ENST00000569455 SSH1Q8WYL5 1049 aa9.79□□□□□ -0.84
CDH13-214ENST00000569455 FRAT1Q92837 279 aaPredicted RBP9.79□□□□□ -0.84
CDH13-214ENST00000569455 TNS2Q63HR2 1409 aa9.79□□□□□ -0.84
CDH13-214ENST00000569455 CACNA1FO60840 1977 aa9.79□□□□□ -0.84
CDH13-214ENST00000569455 SIPA1L3O60292 1781 aaPredicted RBP9.78□□□□□ -0.84
CDH13-214ENST00000569455 RNMTO43148 476 aaKnown RBP9.78□□□□□ -0.84
CDH13-214ENST00000569455 BRPF1P55201 1214 aaPredicted RBP9.78□□□□□ -0.84
CDH13-214ENST00000569455 MPRIPQ6WCQ1 1025 aa9.78□□□□□ -0.84
CDH13-214ENST00000569455 BCL2L13Q9BXK5 485 aa9.78□□□□□ -0.84
CDH13-214ENST00000569455 CHMP4AQ9BY43 222 aa9.78□□□□□ -0.84
CDH13-214ENST00000569455 SPON1Q9HCB6 807 aa9.78□□□□□ -0.84
CDH13-214ENST00000569455 NUP188Q5SRE5 1749 aa9.78□□□□□ -0.84
CDH13-214ENST00000569455 PCDH11XQ9BZA7 1347 aa9.78□□□□□ -0.84
CDH13-214ENST00000569455 PCDH11YQ9BZA8 1340 aa9.78□□□□□ -0.84
CDH13-214ENST00000569455 PHKG2P15735 406 aa9.77□□□□□ -0.85
CDH13-214ENST00000569455 C8orf58Q8NAV2 365 aa9.77□□□□□ -0.85
CDH13-214ENST00000569455 EXOC6Q8TAG9 804 aa9.77□□□□□ -0.85
CDH13-214ENST00000569455 ZCRB1Q8TBF4 217 aaKnown RBP9.77□□□□□ -0.85
CDH13-214ENST00000569455 CAMKK2Q96RR4 588 aa9.77□□□□□ -0.85
CDH13-214ENST00000569455 CRBNQ96SW2 442 aa9.77□□□□□ -0.85
CDH13-214ENST00000569455 UTRNP46939 3433 aa9.76□□□□□ -0.85
CDH13-214ENST00000569455 CHD4Q14839 1912 aa9.76□□□□□ -0.85
CDH13-214ENST00000569455 ELL2O00472 640 aaPredicted RBP9.76□□□□□ -0.85
CDH13-214ENST00000569455 AAMPQ13685 434 aa9.76□□□□□ -0.85
CDH13-214ENST00000569455 FTSJ3Q8IY81 847 aaKnown RBP9.76□□□□□ -0.85
CDH13-214ENST00000569455 TSPYL6Q8N831 410 aa9.76□□□□□ -0.85
CDH13-214ENST00000569455 DCAF5Q96JK2 942 aa9.76□□□□□ -0.85
CDH13-214ENST00000569455 CCDC136Q96JN2 1154 aa9.76□□□□□ -0.85
CDH13-214ENST00000569455 LGR6Q9HBX8 967 aa9.76□□□□□ -0.85
CDH13-214ENST00000569455 MIS18AQ9NYP9 233 aa9.76□□□□□ -0.85
CDH13-214ENST00000569455 BTBD11A6QL63 1104 aa9.75□□□□□ -0.85
CDH13-214ENST00000569455 KCNQ2O43526 872 aa9.75□□□□□ -0.85
CDH13-214ENST00000569455 C20orf194Q5TEA3 1177 aa9.75□□□□□ -0.85
CDH13-214ENST00000569455 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
CDH13-214ENST00000569455 MRPL50Q8N5N7 158 aaKnown RBP9.75□□□□□ -0.85
CDH13-214ENST00000569455 ARHGAP45Q92619 1136 aa9.75□□□□□ -0.85
CDH13-214ENST00000569455 SHANK3Q9BYB0 1731 aa9.75□□□□□ -0.85
CDH13-214ENST00000569455 MRC1P22897 1456 aa9.74□□□□□ -0.85
CDH13-214ENST00000569455 CYP27B1O15528 508 aa9.74□□□□□ -0.85
CDH13-214ENST00000569455 HOXB7P09629 217 aa9.74□□□□□ -0.85
CDH13-214ENST00000569455 NKX1-1Q15270 411 aaPredicted RBP9.74□□□□□ -0.85
CDH13-214ENST00000569455 FAM182BQ5T319 152 aa9.74□□□□□ -0.85
CDH13-214ENST00000569455 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
CDH13-214ENST00000569455 ATF7IPQ6VMQ6 1270 aa9.74□□□□□ -0.85
CDH13-214ENST00000569455 MARCH10Q8NA82 808 aaPredicted RBP9.74□□□□□ -0.85
CDH13-214ENST00000569455 STK31Q9BXU1 1019 aa9.74□□□□□ -0.85
CDH13-214ENST00000569455 API5Q9BZZ5 524 aaKnown RBP9.74□□□□□ -0.85
CDH13-214ENST00000569455 NOB1Q9ULX3 412 aaKnown RBP9.74□□□□□ -0.85
CDH13-214ENST00000569455 SBF2Q86WG5 1849 aa9.74□□□□□ -0.85
CDH13-214ENST00000569455 CEP350Q5VT06 3117 aa9.73□□□□□ -0.85
CDH13-214ENST00000569455 KDM6AO15550 1401 aaPredicted RBP9.73□□□□□ -0.85
CDH13-214ENST00000569455 KAT6BQ8WYB5 2073 aa9.73□□□□□ -0.85
CDH13-214ENST00000569455 HMGB2P26583 209 aaKnown RBP9.73□□□□□ -0.85
CDH13-214ENST00000569455 CCDC30Q5VVM6 783 aa9.73□□□□□ -0.85
CDH13-214ENST00000569455 B4GALNT3Q6L9W6 998 aa9.73□□□□□ -0.85
CDH13-214ENST00000569455 PANK1Q8TE04 598 aa9.73□□□□□ -0.85
CDH13-214ENST00000569455 CHMP4BQ9H444 224 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms