RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 MRS2Q9HD23 443 aa12.52□□□□□ -0.41
UBR1-210ENST00000569337 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
UBR1-210ENST00000569337 NFATC2IPQ8NCF5 419 aa12.51□□□□□ -0.41
UBR1-210ENST00000569337 FLAD1Q8NFF5 587 aa12.51□□□□□ -0.41
UBR1-210ENST00000569337 AK7Q96M32 723 aa12.51□□□□□ -0.41
UBR1-210ENST00000569337 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
UBR1-210ENST00000569337 KDM6AO15550 1401 aaPredicted RBP12.5□□□□□ -0.41
UBR1-210ENST00000569337 TOGARAM1Q9Y4F4 1720 aa12.49□□□□□ -0.41
UBR1-210ENST00000569337 RNMTO43148 476 aaKnown RBP12.49□□□□□ -0.41
UBR1-210ENST00000569337 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
UBR1-210ENST00000569337 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBR1-210ENST00000569337 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
UBR1-210ENST00000569337 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
UBR1-210ENST00000569337 LGR6Q9HBX8 967 aa12.49□□□□□ -0.41
UBR1-210ENST00000569337 CASZ1Q86V15 1759 aa12.48□□□□□ -0.41
UBR1-210ENST00000569337 LY75O60449 1722 aa12.48□□□□□ -0.41
UBR1-210ENST00000569337 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
UBR1-210ENST00000569337 POLD1P28340 1107 aa12.48□□□□□ -0.41
UBR1-210ENST00000569337 ITPK1Q13572 414 aa12.48□□□□□ -0.41
UBR1-210ENST00000569337 LINC00116Q8NCU8 138 aa12.48□□□□□ -0.41
UBR1-210ENST00000569337 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
UBR1-210ENST00000569337 ARXQ96QS3 562 aa12.48□□□□□ -0.41
UBR1-210ENST00000569337 SGIP1Q9BQI5 828 aa12.48□□□□□ -0.41
UBR1-210ENST00000569337 SLC52A2Q9HAB3 445 aa12.48□□□□□ -0.41
UBR1-210ENST00000569337 PHF14O94880 888 aa12.47□□□□□ -0.41
UBR1-210ENST00000569337 PRKAR2BP31323 418 aa12.47□□□□□ -0.41
UBR1-210ENST00000569337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.46□□□□□ -0.41
UBR1-210ENST00000569337 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
UBR1-210ENST00000569337 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
UBR1-210ENST00000569337 GNPATO15228 680 aa12.46□□□□□ -0.41
UBR1-210ENST00000569337 FCHSD2O94868 740 aa12.46□□□□□ -0.41
UBR1-210ENST00000569337 SSFA2P28290 1259 aa12.46□□□□□ -0.41
UBR1-210ENST00000569337 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
UBR1-210ENST00000569337 FHDC1Q9C0D6 1143 aaPredicted RBP12.46□□□□□ -0.41
UBR1-210ENST00000569337 RSPH6AQ9H0K4 717 aa12.46□□□□□ -0.41
UBR1-210ENST00000569337 ADAMTS8Q9UP79 889 aa12.46□□□□□ -0.41
UBR1-210ENST00000569337 SMIM5Q71RC9 77 aa12.45□□□□□ -0.42
UBR1-210ENST00000569337 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
UBR1-210ENST00000569337 SYT17Q9BSW7 474 aa12.45□□□□□ -0.42
UBR1-210ENST00000569337 ITGB4P16144 1822 aa12.45□□□□□ -0.42
UBR1-210ENST00000569337 NEFMP07197 916 aa12.44□□□□□ -0.42
UBR1-210ENST00000569337 TEFQ10587 303 aa12.44□□□□□ -0.42
UBR1-210ENST00000569337 RC3H1Q5TC82 1133 aaKnown RBP12.44□□□□□ -0.42
UBR1-210ENST00000569337 MSL1Q68DK7 614 aa12.44□□□□□ -0.42
UBR1-210ENST00000569337 AMIGO3Q86WK7 504 aa12.44□□□□□ -0.42
UBR1-210ENST00000569337 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
UBR1-210ENST00000569337 RTCBQ9Y3I0 505 aaKnown RBP12.44□□□□□ -0.42
UBR1-210ENST00000569337 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
UBR1-210ENST00000569337 SLC39A6Q13433 755 aa12.43□□□□□ -0.42
UBR1-210ENST00000569337 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
UBR1-210ENST00000569337 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
UBR1-210ENST00000569337 TRAPPC3LQ5T215 181 aa12.42□□□□□ -0.42
UBR1-210ENST00000569337 RTF1Q92541 710 aaKnown RBP12.42□□□□□ -0.42
UBR1-210ENST00000569337 C4BP0C0L5 1744 aa12.42□□□□□ -0.42
UBR1-210ENST00000569337 C5P01031 1676 aa12.42□□□□□ -0.42
UBR1-210ENST00000569337 CNTNAP4Q9C0A0 1308 aa12.41□□□□□ -0.42
UBR1-210ENST00000569337 RPS6KA4O75676 772 aa12.41□□□□□ -0.42
UBR1-210ENST00000569337 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
UBR1-210ENST00000569337 WDR43Q15061 677 aaKnown RBP eCLIP12.41□□□□□ -0.42
UBR1-210ENST00000569337 TTC5Q8N0Z6 440 aa12.41□□□□□ -0.42
UBR1-210ENST00000569337 PLEKHF1Q96S99 279 aa12.41□□□□□ -0.42
UBR1-210ENST00000569337 PNNQ9H307 717 aaKnown RBP12.41□□□□□ -0.42
UBR1-210ENST00000569337 DNAJC10Q8IXB1 793 aa12.4□□□□□ -0.42
UBR1-210ENST00000569337 CCDC146Q8IYE0 955 aa12.4□□□□□ -0.42
UBR1-210ENST00000569337 ARHGEF1Q92888 912 aaKnown RBP12.4□□□□□ -0.42
UBR1-210ENST00000569337 DLG5Q8TDM6 1919 aa12.39□□□□□ -0.43
UBR1-210ENST00000569337 SENP3-EIF4A1A0A087X0R7 540 aa12.39□□□□□ -0.43
UBR1-210ENST00000569337 RFC4P35249 363 aa12.39□□□□□ -0.43
UBR1-210ENST00000569337 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
UBR1-210ENST00000569337 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
UBR1-210ENST00000569337 MRC1P22897 1456 aa12.39□□□□□ -0.43
UBR1-210ENST00000569337 BTBD11A6QL63 1104 aa12.38□□□□□ -0.43
UBR1-210ENST00000569337 HTATSF1O43719 755 aaKnown RBP12.38□□□□□ -0.43
UBR1-210ENST00000569337 ZNF790Q6PG37 636 aa12.38□□□□□ -0.43
UBR1-210ENST00000569337 MCM10Q7L590 875 aa12.38□□□□□ -0.43
UBR1-210ENST00000569337 NLGN1Q8N2Q7 840 aa12.38□□□□□ -0.43
UBR1-210ENST00000569337 CEMIPQ8WUJ3 1361 aa12.38□□□□□ -0.43
UBR1-210ENST00000569337 TAF1LQ8IZX4 1826 aa12.37□□□□□ -0.43
UBR1-210ENST00000569337 CYP19A1P11511 503 aaPredicted RBP12.37□□□□□ -0.43
UBR1-210ENST00000569337 INTS5Q6P9B9 1019 aaKnown RBP12.37□□□□□ -0.43
UBR1-210ENST00000569337 CCDC87Q9NVE4 849 aa12.37□□□□□ -0.43
UBR1-210ENST00000569337 VIRMAQ69YN4 1812 aaKnown RBP12.37□□□□□ -0.43
UBR1-210ENST00000569337 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
UBR1-210ENST00000569337 SCN11AQ9UI33 1791 aa12.36□□□□□ -0.43
UBR1-210ENST00000569337 STARD3NLO95772 234 aa12.36□□□□□ -0.43
UBR1-210ENST00000569337 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
UBR1-210ENST00000569337 RUNDC1Q96C34 613 aa12.36□□□□□ -0.43
UBR1-210ENST00000569337 ZNF496Q96IT1 587 aaPredicted RBP12.36□□□□□ -0.43
UBR1-210ENST00000569337 FMNL2Q96PY5 1086 aa12.36□□□□□ -0.43
UBR1-210ENST00000569337 TEX13AQ9BXU3 409 aaPredicted RBP12.36□□□□□ -0.43
UBR1-210ENST00000569337 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
UBR1-210ENST00000569337 MMP10P09238 476 aa12.35□□□□□ -0.43
UBR1-210ENST00000569337 GYS1P13807 737 aa12.35□□□□□ -0.43
UBR1-210ENST00000569337 GPR162Q16538 588 aa12.35□□□□□ -0.43
UBR1-210ENST00000569337 PELP1Q8IZL8 1130 aaKnown RBP12.35□□□□□ -0.43
UBR1-210ENST00000569337 NLGN2Q8NFZ4 835 aa12.35□□□□□ -0.43
UBR1-210ENST00000569337 CD2APQ9Y5K6 639 aa12.35□□□□□ -0.43
UBR1-210ENST00000569337 ZNF831Q5JPB2 1677 aa12.35□□□□□ -0.43
UBR1-210ENST00000569337 HEG1Q9ULI3 1381 aa12.34□□□□□ -0.43
UBR1-210ENST00000569337 APAF1O14727 1248 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms