RNA–Protein interactions for RNA: ENST00000569261.2

TUBAP4-201, Transcript of tubulin alpha pseudogene 4, humanhuman

BASIC

Gene TUBAP4, Length 416 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAP4-201ENST00000569261 APLP1P51693 650 aa11.19□□□□□ -0.62
TUBAP4-201ENST00000569261 ASAP1Q9ULH1 1129 aa11.19□□□□□ -0.62
TUBAP4-201ENST00000569261 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
TUBAP4-201ENST00000569261 WASHC2AQ641Q2 1341 aa11.18□□□□□ -0.62
TUBAP4-201ENST00000569261 PPM1GO15355 546 aaPredicted RBP11.18□□□□□ -0.62
TUBAP4-201ENST00000569261 PHKG2P15735 406 aa11.18□□□□□ -0.62
TUBAP4-201ENST00000569261 ATP6V1AP38606 617 aa11.18□□□□□ -0.62
TUBAP4-201ENST00000569261 N4BP2Q86UW6 1770 aaPredicted RBP11.18□□□□□ -0.62
TUBAP4-201ENST00000569261 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
TUBAP4-201ENST00000569261 ADRA2BP18089 450 aa11.17□□□□□ -0.62
TUBAP4-201ENST00000569261 TGFB2P61812 414 aa11.17□□□□□ -0.62
TUBAP4-201ENST00000569261 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
TUBAP4-201ENST00000569261 CARD14Q9BXL6 1004 aa11.17□□□□□ -0.62
TUBAP4-201ENST00000569261 BRCA1P38398 1863 aaKnown RBP11.17□□□□□ -0.62
TUBAP4-201ENST00000569261 TOMM70O94826 608 aa11.16□□□□□ -0.62
TUBAP4-201ENST00000569261 NLGN1Q8N2Q7 840 aa11.16□□□□□ -0.62
TUBAP4-201ENST00000569261 EYA1Q99502 592 aa11.16□□□□□ -0.62
TUBAP4-201ENST00000569261 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
TUBAP4-201ENST00000569261 BCS1LQ9Y276 419 aa11.16□□□□□ -0.62
TUBAP4-201ENST00000569261 RTCBQ9Y3I0 505 aaKnown RBP11.16□□□□□ -0.62
TUBAP4-201ENST00000569261 WDR90Q96KV7 1748 aa11.15□□□□□ -0.62
TUBAP4-201ENST00000569261 CNTNAP4Q9C0A0 1308 aa11.15□□□□□ -0.62
TUBAP4-201ENST00000569261 TRAPPC3LQ5T215 181 aa11.15□□□□□ -0.62
TUBAP4-201ENST00000569261 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.62
TUBAP4-201ENST00000569261 ARFGEF1Q9Y6D6 1849 aa11.14□□□□□ -0.63
TUBAP4-201ENST00000569261 A0A0G2JLW4 131 aa11.14□□□□□ -0.63
TUBAP4-201ENST00000569261 RC3H1Q5TC82 1133 aaKnown RBP11.14□□□□□ -0.63
TUBAP4-201ENST00000569261 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
TUBAP4-201ENST00000569261 HSP90AB1P08238 724 aaKnown RBP11.13□□□□□ -0.63
TUBAP4-201ENST00000569261 DPEP1P16444 411 aa11.13□□□□□ -0.63
TUBAP4-201ENST00000569261 ARHGAP27Q6ZUM4 889 aa11.13□□□□□ -0.63
TUBAP4-201ENST00000569261 DNAJC5GQ8N7S2 189 aa11.13□□□□□ -0.63
TUBAP4-201ENST00000569261 RBM46Q8TBY0 533 aaKnown RBP11.13□□□□□ -0.63
TUBAP4-201ENST00000569261 SLC4A9Q96Q91 983 aa11.13□□□□□ -0.63
TUBAP4-201ENST00000569261 NMRK2Q9NPI5 230 aa11.13□□□□□ -0.63
TUBAP4-201ENST00000569261 POLKQ9UBT6 870 aa11.13□□□□□ -0.63
TUBAP4-201ENST00000569261 KDM6AO15550 1401 aaPredicted RBP11.12□□□□□ -0.63
TUBAP4-201ENST00000569261 FCHSD2O94868 740 aa11.12□□□□□ -0.63
TUBAP4-201ENST00000569261 GYS1P13807 737 aa11.12□□□□□ -0.63
TUBAP4-201ENST00000569261 RFC4P35249 363 aa11.12□□□□□ -0.63
TUBAP4-201ENST00000569261 EIF4A2Q14240 407 aaKnown RBP11.12□□□□□ -0.63
TUBAP4-201ENST00000569261 ARHGEF1Q92888 912 aaKnown RBP11.12□□□□□ -0.63
TUBAP4-201ENST00000569261 DCAF5Q96JK2 942 aa11.12□□□□□ -0.63
TUBAP4-201ENST00000569261 PARP3Q9Y6F1 533 aa11.12□□□□□ -0.63
TUBAP4-201ENST00000569261 TNRC6CQ9HCJ0 1690 aaKnown RBP11.11□□□□□ -0.63
TUBAP4-201ENST00000569261 RPS6KA4O75676 772 aa11.11□□□□□ -0.63
TUBAP4-201ENST00000569261 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
TUBAP4-201ENST00000569261 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
TUBAP4-201ENST00000569261 FSTL1Q12841 308 aa11.1□□□□□ -0.63
TUBAP4-201ENST00000569261 C9orf131Q5VYM1 1079 aa11.1□□□□□ -0.63
TUBAP4-201ENST00000569261 MYH14Q7Z406 1995 aaKnown RBP11.1□□□□□ -0.63
TUBAP4-201ENST00000569261 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
TUBAP4-201ENST00000569261 KCPQ6ZWJ8 1503 aa11.09□□□□□ -0.63
TUBAP4-201ENST00000569261 TJP1Q07157 1748 aa11.09□□□□□ -0.63
TUBAP4-201ENST00000569261 KCNA3P22001 575 aa11.09□□□□□ -0.63
TUBAP4-201ENST00000569261 CABP4P57796 275 aa11.09□□□□□ -0.63
TUBAP4-201ENST00000569261 DALRD3Q5D0E6 543 aaKnown RBP11.09□□□□□ -0.63
TUBAP4-201ENST00000569261 ZNF530Q6P9A1 599 aaPredicted RBP11.09□□□□□ -0.63
TUBAP4-201ENST00000569261 PIM2Q9P1W9 311 aa11.09□□□□□ -0.63
TUBAP4-201ENST00000569261 USP42Q9H9J4 1324 aaKnown RBP11.09□□□□□ -0.63
TUBAP4-201ENST00000569261 AMOTQ4VCS5 1084 aa11.08□□□□□ -0.64
TUBAP4-201ENST00000569261 PLEKHO1Q53GL0 409 aaPredicted RBP11.08□□□□□ -0.64
TUBAP4-201ENST00000569261 KLRG1Q96E93 195 aa11.08□□□□□ -0.64
TUBAP4-201ENST00000569261 TNNT2P45379 298 aaPredicted RBP11.07□□□□□ -0.64
TUBAP4-201ENST00000569261 CRKLP46109 303 aaKnown RBP11.07□□□□□ -0.64
TUBAP4-201ENST00000569261 DDR1Q08345 913 aa11.07□□□□□ -0.64
TUBAP4-201ENST00000569261 FKBP8Q14318 412 aa11.07□□□□□ -0.64
TUBAP4-201ENST00000569261 JMYQ8N9B5 988 aa11.07□□□□□ -0.64
TUBAP4-201ENST00000569261 RNF181Q9P0P0 153 aa11.07□□□□□ -0.64
TUBAP4-201ENST00000569261 ZC3H4Q9UPT8 1303 aaKnown RBP11.07□□□□□ -0.64
TUBAP4-201ENST00000569261 ADAMTS7Q9UKP4 1686 aa11.06□□□□□ -0.64
TUBAP4-201ENST00000569261 PTCD1O75127 700 aaKnown RBP11.06□□□□□ -0.64
TUBAP4-201ENST00000569261 MTHFSP49914 203 aa11.06□□□□□ -0.64
TUBAP4-201ENST00000569261 C1orf141Q5JVX7 400 aa11.06□□□□□ -0.64
TUBAP4-201ENST00000569261 SRP68Q9UHB9 627 aaKnown RBP11.06□□□□□ -0.64
TUBAP4-201ENST00000569261 SCN11AQ9UI33 1791 aa11.05□□□□□ -0.64
TUBAP4-201ENST00000569261 SBF1O95248 1867 aa11.04□□□□□ -0.64
TUBAP4-201ENST00000569261 DLEC1Q9Y238 1755 aa11.04□□□□□ -0.64
TUBAP4-201ENST00000569261 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
TUBAP4-201ENST00000569261 CHRNA5P30532 468 aa11.04□□□□□ -0.64
TUBAP4-201ENST00000569261 HTRA3P83110 453 aa11.04□□□□□ -0.64
TUBAP4-201ENST00000569261 SMC1BQ8NDV3 1235 aa11.04□□□□□ -0.64
TUBAP4-201ENST00000569261 COL13A1Q5TAT6 717 aaPredicted RBP11.03□□□□□ -0.64
TUBAP4-201ENST00000569261 AEBP1Q8IUX7 1158 aa11.03□□□□□ -0.64
TUBAP4-201ENST00000569261 NFATC2IPQ8NCF5 419 aa11.03□□□□□ -0.64
TUBAP4-201ENST00000569261 POLR3GLQ9BT43 218 aa11.03□□□□□ -0.64
TUBAP4-201ENST00000569261 MRC1P22897 1456 aa11.03□□□□□ -0.64
TUBAP4-201ENST00000569261 TIAM2Q8IVF5 1701 aa11.03□□□□□ -0.64
TUBAP4-201ENST00000569261 SOS1Q07889 1333 aaPredicted RBP11.03□□□□□ -0.64
TUBAP4-201ENST00000569261 PCNTO95613 3336 aa11.02□□□□□ -0.64
TUBAP4-201ENST00000569261 NRXN2Q9P2S2 1712 aa11.02□□□□□ -0.65
TUBAP4-201ENST00000569261 ZPR1O75312 459 aa11.02□□□□□ -0.65
TUBAP4-201ENST00000569261 TM4SF1P30408 202 aa11.02□□□□□ -0.65
TUBAP4-201ENST00000569261 INTS5Q6P9B9 1019 aaKnown RBP11.02□□□□□ -0.65
TUBAP4-201ENST00000569261 RRAGCQ9HB90 399 aa11.02□□□□□ -0.65
TUBAP4-201ENST00000569261 AFDNP55196 1824 aaKnown RBP11.01□□□□□ -0.65
TUBAP4-201ENST00000569261 LMNB1P20700 586 aa11.01□□□□□ -0.65
TUBAP4-201ENST00000569261 TIMELESSQ9UNS1 1208 aa11.01□□□□□ -0.65
TUBAP4-201ENST00000569261 RASSF7Q02833 373 aa11□□□□□ -0.65
TUBAP4-201ENST00000569261 USPL1Q5W0Q7 1092 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms