RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 PHF14O94880 888 aa22.51■■□□□ 1.19
CDR2-207ENST00000569045 SSFA2P28290 1259 aa22.51■■□□□ 1.19
CDR2-207ENST00000569045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.5■■□□□ 1.19
CDR2-207ENST00000569045 PER1O15534 1290 aaPredicted RBP22.5■■□□□ 1.19
CDR2-207ENST00000569045 KDRP35968 1356 aa22.5■■□□□ 1.19
CDR2-207ENST00000569045 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
CDR2-207ENST00000569045 LINC00116Q8NCU8 138 aa22.49■■□□□ 1.19
CDR2-207ENST00000569045 RBM42Q9BTD8 480 aaKnown RBP22.49■■□□□ 1.19
CDR2-207ENST00000569045 GNPATO15228 680 aa22.48■■□□□ 1.19
CDR2-207ENST00000569045 DIAPH1O60610 1272 aaKnown RBP22.47■■□□□ 1.19
CDR2-207ENST00000569045 ITPK1Q13572 414 aa22.47■■□□□ 1.19
CDR2-207ENST00000569045 NPC1L1Q9UHC9 1359 aa22.46■■□□□ 1.19
CDR2-207ENST00000569045 KDM6AO15550 1401 aaPredicted RBP22.46■■□□□ 1.19
CDR2-207ENST00000569045 UBR3Q6ZT12 1888 aa22.45■■□□□ 1.19
CDR2-207ENST00000569045 CNGB1Q14028 1251 aaPredicted RBP22.45■■□□□ 1.18
CDR2-207ENST00000569045 UTRNP46939 3433 aa22.44■■□□□ 1.18
CDR2-207ENST00000569045 AKAP4Q5JQC9 854 aa22.44■■□□□ 1.18
CDR2-207ENST00000569045 NLGN2Q8NFZ4 835 aa22.44■■□□□ 1.18
CDR2-207ENST00000569045 RTCBQ9Y3I0 505 aaKnown RBP22.44■■□□□ 1.18
CDR2-207ENST00000569045 CD2APQ9Y5K6 639 aa22.44■■□□□ 1.18
CDR2-207ENST00000569045 HMOX1P09601 288 aa22.43■■□□□ 1.18
CDR2-207ENST00000569045 NFATC2IPQ8NCF5 419 aa22.43■■□□□ 1.18
CDR2-207ENST00000569045 CHD4Q14839 1912 aa22.42■■□□□ 1.18
CDR2-207ENST00000569045 TRAPPC3LQ5T215 181 aa22.42■■□□□ 1.18
CDR2-207ENST00000569045 AMIGO3Q86WK7 504 aa22.42■■□□□ 1.18
CDR2-207ENST00000569045 GRIN3BO60391 1043 aa22.41■■□□□ 1.18
CDR2-207ENST00000569045 RC3H1Q5TC82 1133 aaKnown RBP22.41■■□□□ 1.18
CDR2-207ENST00000569045 ZNF831Q5JPB2 1677 aa22.41■■□□□ 1.18
CDR2-207ENST00000569045 PTCD1O75127 700 aaKnown RBP22.4■■□□□ 1.18
CDR2-207ENST00000569045 ADRA2BP18089 450 aa22.4■■□□□ 1.18
CDR2-207ENST00000569045 SMIM5Q71RC9 77 aa22.4■■□□□ 1.18
CDR2-207ENST00000569045 CNTNAP4Q9C0A0 1308 aa22.38■■□□□ 1.17
CDR2-207ENST00000569045 SLC4A9Q96Q91 983 aa22.38■■□□□ 1.17
CDR2-207ENST00000569045 U2SURPO15042 1029 aaKnown RBP22.37■■□□□ 1.17
CDR2-207ENST00000569045 RFC4P35249 363 aa22.37■■□□□ 1.17
CDR2-207ENST00000569045 CFAP53Q96M91 514 aa22.37■■□□□ 1.17
CDR2-207ENST00000569045 SCN11AQ9UI33 1791 aa22.36■■□□□ 1.17
CDR2-207ENST00000569045 RPS6KA4O75676 772 aa22.36■■□□□ 1.17
CDR2-207ENST00000569045 NLGN1Q8N2Q7 840 aa22.36■■□□□ 1.17
CDR2-207ENST00000569045 ZNF784Q8NCA9 323 aaPredicted RBP22.36■■□□□ 1.17
CDR2-207ENST00000569045 SLC52A2Q9HAB3 445 aa22.36■■□□□ 1.17
CDR2-207ENST00000569045 GOLGB1Q14789 3259 aaKnown RBP22.36■■□□□ 1.17
CDR2-207ENST00000569045 RNMTO43148 476 aaKnown RBP22.34■■□□□ 1.17
CDR2-207ENST00000569045 MTHFSDQ2M296 383 aaKnown RBP22.34■■□□□ 1.17
CDR2-207ENST00000569045 COL5A3P25940 1745 aaPredicted RBP22.34■■□□□ 1.17
CDR2-207ENST00000569045 MMP10P09238 476 aa22.33■■□□□ 1.17
CDR2-207ENST00000569045 ARHGEF1Q92888 912 aaKnown RBP22.33■■□□□ 1.17
CDR2-207ENST00000569045 LGR6Q9HBX8 967 aa22.33■■□□□ 1.17
CDR2-207ENST00000569045 CRKLP46109 303 aaKnown RBP22.32■■□□□ 1.16
CDR2-207ENST00000569045 YBX3P16989 372 aaKnown RBP eCLIP22.31■■□□□ 1.16
CDR2-207ENST00000569045 GAS2L2Q8NHY3 880 aa22.31■■□□□ 1.16
CDR2-207ENST00000569045 NUDCQ9Y266 331 aa22.31■■□□□ 1.16
CDR2-207ENST00000569045 COL3A1P02461 1466 aaPredicted RBP22.29■■□□□ 1.16
CDR2-207ENST00000569045 MRC1P22897 1456 aa22.28■■□□□ 1.16
CDR2-207ENST00000569045 PARP3Q9Y6F1 533 aa22.28■■□□□ 1.16
CDR2-207ENST00000569045 GNAT3A8MTJ3 354 aa22.27■■□□□ 1.16
CDR2-207ENST00000569045 GYS1P13807 737 aa22.27■■□□□ 1.16
CDR2-207ENST00000569045 TEFQ10587 303 aa22.27■■□□□ 1.16
CDR2-207ENST00000569045 TTC5Q8N0Z6 440 aa22.27■■□□□ 1.16
CDR2-207ENST00000569045 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
CDR2-207ENST00000569045 SLC39A6Q13433 755 aa22.26■■□□□ 1.15
CDR2-207ENST00000569045 MYH14Q7Z406 1995 aaKnown RBP22.25■■□□□ 1.15
CDR2-207ENST00000569045 CICQ96RK0 1608 aaPredicted RBP22.25■■□□□ 1.15
CDR2-207ENST00000569045 DNAJC10Q8IXB1 793 aa22.25■■□□□ 1.15
CDR2-207ENST00000569045 TJP1Q07157 1748 aa22.25■■□□□ 1.15
CDR2-207ENST00000569045 VIRMAQ69YN4 1812 aaKnown RBP22.24■■□□□ 1.15
CDR2-207ENST00000569045 ZPR1O75312 459 aa22.24■■□□□ 1.15
CDR2-207ENST00000569045 TGFB2P61812 414 aa22.24■■□□□ 1.15
CDR2-207ENST00000569045 VSIG10Q8N0Z9 540 aa22.24■■□□□ 1.15
CDR2-207ENST00000569045 PPP2R1AP30153 589 aa22.23■■□□□ 1.15
CDR2-207ENST00000569045 INTS5Q6P9B9 1019 aaKnown RBP22.23■■□□□ 1.15
CDR2-207ENST00000569045 ADAMTS7Q9UKP4 1686 aa22.23■■□□□ 1.15
CDR2-207ENST00000569045 U2AF1L5P0DN76 240 aaPredicted RBP22.22■■□□□ 1.15
CDR2-207ENST00000569045 PRKAR2BP31323 418 aa22.22■■□□□ 1.15
CDR2-207ENST00000569045 U2AF1Q01081 240 aaKnown RBP eCLIP22.22■■□□□ 1.15
CDR2-207ENST00000569045 USP42Q9H9J4 1324 aaKnown RBP22.22■■□□□ 1.15
CDR2-207ENST00000569045 C4AP0C0L4 1744 aa22.21■■□□□ 1.15
CDR2-207ENST00000569045 STARD3NLO95772 234 aa22.21■■□□□ 1.15
CDR2-207ENST00000569045 CYP19A1P11511 503 aaPredicted RBP22.21■■□□□ 1.15
CDR2-207ENST00000569045 WWC3Q9ULE0 1092 aa22.21■■□□□ 1.15
CDR2-207ENST00000569045 SRP68Q9UHB9 627 aaKnown RBP22.2■■□□□ 1.14
CDR2-207ENST00000569045 TEX13AQ9BXU3 409 aaPredicted RBP22.19■■□□□ 1.14
CDR2-207ENST00000569045 RSPH6AQ9H0K4 717 aa22.19■■□□□ 1.14
CDR2-207ENST00000569045 C10orf71Q711Q0 1435 aa22.19■■□□□ 1.14
CDR2-207ENST00000569045 KCPQ6ZWJ8 1503 aa22.19■■□□□ 1.14
CDR2-207ENST00000569045 SOS1Q07889 1333 aaPredicted RBP22.18■■□□□ 1.14
CDR2-207ENST00000569045 FKBP8Q14318 412 aa22.18■■□□□ 1.14
CDR2-207ENST00000569045 IL17REQ8NFR9 667 aa22.18■■□□□ 1.14
CDR2-207ENST00000569045 RTF1Q92541 710 aaKnown RBP22.18■■□□□ 1.14
CDR2-207ENST00000569045 GIGYF1O75420 1035 aaPredicted RBP22.17■■□□□ 1.14
CDR2-207ENST00000569045 FCHSD2O94868 740 aa22.17■■□□□ 1.14
CDR2-207ENST00000569045 NEFMP07197 916 aa22.17■■□□□ 1.14
CDR2-207ENST00000569045 ZNF790Q6PG37 636 aa22.17■■□□□ 1.14
CDR2-207ENST00000569045 KIF13BQ9NQT8 1826 aa22.17■■□□□ 1.14
CDR2-207ENST00000569045 PXDNLA1KZ92 1463 aa22.16■■□□□ 1.14
CDR2-207ENST00000569045 A0A0G2JLW4 131 aa22.16■■□□□ 1.14
CDR2-207ENST00000569045 USPL1Q5W0Q7 1092 aa22.16■■□□□ 1.14
CDR2-207ENST00000569045 PHACTR3Q96KR7 559 aa22.16■■□□□ 1.14
CDR2-207ENST00000569045 COL15A1P39059 1388 aa22.15■■□□□ 1.14
CDR2-207ENST00000569045 NPM2Q86SE8 214 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms