RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 EIF4A1P60842 406 aaKnown RBP19.63■□□□□ 0.73
SNX20-204ENST00000568993 CHRNA2Q15822 529 aa19.63■□□□□ 0.73
SNX20-204ENST00000568993 CHMP4AQ9BY43 222 aa19.63■□□□□ 0.73
SNX20-204ENST00000568993 SIPA1L3O60292 1781 aaPredicted RBP19.63■□□□□ 0.73
SNX20-204ENST00000568993 TATP17735 454 aaPredicted RBP19.63■□□□□ 0.73
SNX20-204ENST00000568993 ABCA3Q99758 1704 aa19.62■□□□□ 0.73
SNX20-204ENST00000568993 C8orf34Q49A92 452 aa19.62■□□□□ 0.73
SNX20-204ENST00000568993 G2E3Q7L622 706 aa19.61■□□□□ 0.73
SNX20-204ENST00000568993 CSB-PGBD3P0DP91 1061 aa19.61■□□□□ 0.73
SNX20-204ENST00000568993 SPG7Q9UQ90 795 aa19.61■□□□□ 0.73
SNX20-204ENST00000568993 MEGF6O75095 1541 aa19.6■□□□□ 0.73
SNX20-204ENST00000568993 BTBD11A6QL63 1104 aa19.6■□□□□ 0.73
SNX20-204ENST00000568993 PKD1L3Q7Z443 1732 aa19.59■□□□□ 0.73
SNX20-204ENST00000568993 SCN11AQ9UI33 1791 aa19.59■□□□□ 0.73
SNX20-204ENST00000568993 HEG1Q9ULI3 1381 aa19.59■□□□□ 0.73
SNX20-204ENST00000568993 CCT4P50991 539 aaKnown RBP19.58■□□□□ 0.73
SNX20-204ENST00000568993 FLIIQ13045 1269 aa19.58■□□□□ 0.73
SNX20-204ENST00000568993 GCC1Q96CN9 775 aa19.58■□□□□ 0.73
SNX20-204ENST00000568993 PRDM11Q9NQV5 511 aa19.58■□□□□ 0.73
SNX20-204ENST00000568993 HDGFL1Q5TGJ6 251 aa19.58■□□□□ 0.72
SNX20-204ENST00000568993 SIRT2Q8IXJ6 389 aa19.58■□□□□ 0.72
SNX20-204ENST00000568993 WDR17Q8IZU2 1322 aa19.57■□□□□ 0.72
SNX20-204ENST00000568993 PHKG2P15735 406 aa19.57■□□□□ 0.72
SNX20-204ENST00000568993 ANP32AP39687 249 aaKnown RBP19.57■□□□□ 0.72
SNX20-204ENST00000568993 NUCB1Q02818 461 aa19.56■□□□□ 0.72
SNX20-204ENST00000568993 N4BP2Q86UW6 1770 aaPredicted RBP19.56■□□□□ 0.72
SNX20-204ENST00000568993 KCNQ3O43525 872 aa19.56■□□□□ 0.72
SNX20-204ENST00000568993 IFNL2Q8IZJ0 200 aa19.56■□□□□ 0.72
SNX20-204ENST00000568993 C1orf115Q9H7X2 142 aa19.56■□□□□ 0.72
SNX20-204ENST00000568993 COL5A2P05997 1499 aaPredicted RBP19.56■□□□□ 0.72
SNX20-204ENST00000568993 KDM6AO15550 1401 aaPredicted RBP19.55■□□□□ 0.72
SNX20-204ENST00000568993 PXDNLA1KZ92 1463 aa19.54■□□□□ 0.72
SNX20-204ENST00000568993 RPAP2Q8IXW5 612 aaPredicted RBP19.54■□□□□ 0.72
SNX20-204ENST00000568993 ATP10DQ9P241 1426 aa19.54■□□□□ 0.72
SNX20-204ENST00000568993 F6X3S4 739 aa19.53■□□□□ 0.72
SNX20-204ENST00000568993 MSH5O43196 834 aa19.53■□□□□ 0.72
SNX20-204ENST00000568993 ANKRD44Q8N8A2 993 aa19.53■□□□□ 0.72
SNX20-204ENST00000568993 MRC1P22897 1456 aa19.53■□□□□ 0.72
SNX20-204ENST00000568993 FKBP5Q13451 457 aaPredicted RBP19.52■□□□□ 0.72
SNX20-204ENST00000568993 NECTIN2Q92692 538 aa19.52■□□□□ 0.72
SNX20-204ENST00000568993 DCAF5Q96JK2 942 aa19.52■□□□□ 0.72
SNX20-204ENST00000568993 SLC52A2Q9HAB3 445 aa19.52■□□□□ 0.72
SNX20-204ENST00000568993 LTBP4Q8N2S1 1624 aa19.52■□□□□ 0.72
SNX20-204ENST00000568993 PARP4Q9UKK3 1724 aaKnown RBP19.52■□□□□ 0.72
SNX20-204ENST00000568993 GIGYF1O75420 1035 aaPredicted RBP19.52■□□□□ 0.72
SNX20-204ENST00000568993 HSP90AB1P08238 724 aaKnown RBP19.52■□□□□ 0.72
SNX20-204ENST00000568993 CYP27B1O15528 508 aa19.51■□□□□ 0.71
SNX20-204ENST00000568993 CHD1LQ86WJ1 897 aa19.51■□□□□ 0.71
SNX20-204ENST00000568993 MEIS3Q99687 375 aa19.51■□□□□ 0.71
SNX20-204ENST00000568993 AHDC1Q5TGY3 1603 aaPredicted RBP19.51■□□□□ 0.71
SNX20-204ENST00000568993 SLC4A10Q6U841 1118 aa19.51■□□□□ 0.71
SNX20-204ENST00000568993 IPO9Q96P70 1041 aaKnown RBP19.51■□□□□ 0.71
SNX20-204ENST00000568993 CARD10Q9BWT7 1032 aa19.51■□□□□ 0.71
SNX20-204ENST00000568993 CEP85Q6P2H3 762 aa19.5■□□□□ 0.71
SNX20-204ENST00000568993 DCTPP1Q9H773 170 aa19.5■□□□□ 0.71
SNX20-204ENST00000568993 ROBO1Q9Y6N7 1651 aa19.5■□□□□ 0.71
SNX20-204ENST00000568993 EIF2S2P20042 333 aaKnown RBP19.49■□□□□ 0.71
SNX20-204ENST00000568993 TOM1L2Q6ZVM7 507 aa19.49■□□□□ 0.71
SNX20-204ENST00000568993 ZNF790Q6PG37 636 aa19.48■□□□□ 0.71
SNX20-204ENST00000568993 PHAXQ9H814 394 aaKnown RBP19.48■□□□□ 0.71
SNX20-204ENST00000568993 CHPF2Q9P2E5 772 aa19.48■□□□□ 0.71
SNX20-204ENST00000568993 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
SNX20-204ENST00000568993 GNAI3P08754 354 aa19.47■□□□□ 0.71
SNX20-204ENST00000568993 COL22A1Q8NFW1 1626 aaPredicted RBP19.46■□□□□ 0.71
SNX20-204ENST00000568993 ANKRD45Q5TZF3 282 aa19.46■□□□□ 0.71
SNX20-204ENST00000568993 NFATC2IPQ8NCF5 419 aa19.46■□□□□ 0.71
SNX20-204ENST00000568993 LNPKQ9C0E8 428 aa19.46■□□□□ 0.71
SNX20-204ENST00000568993 GNAI2P04899 355 aa19.45■□□□□ 0.7
SNX20-204ENST00000568993 ZCRB1Q8TBF4 217 aaKnown RBP19.45■□□□□ 0.7
SNX20-204ENST00000568993 PCDH11XQ9BZA7 1347 aa19.45■□□□□ 0.7
SNX20-204ENST00000568993 PCDH11YQ9BZA8 1340 aa19.45■□□□□ 0.7
SNX20-204ENST00000568993 EIF5BO60841 1220 aaKnown RBP19.44■□□□□ 0.7
SNX20-204ENST00000568993 IL2RBP14784 551 aa19.44■□□□□ 0.7
SNX20-204ENST00000568993 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
SNX20-204ENST00000568993 NKX1-1Q15270 411 aaPredicted RBP19.44■□□□□ 0.7
SNX20-204ENST00000568993 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
SNX20-204ENST00000568993 COL14A1Q05707 1796 aaKnown RBP19.43■□□□□ 0.7
SNX20-204ENST00000568993 HMMRO75330 724 aa19.42■□□□□ 0.7
SNX20-204ENST00000568993 EVA1CP58658 441 aa19.42■□□□□ 0.7
SNX20-204ENST00000568993 USP44Q9H0E7 712 aa19.42■□□□□ 0.7
SNX20-204ENST00000568993 HYPKQ9NX55 129 aa19.42■□□□□ 0.7
SNX20-204ENST00000568993 SLC39A6Q13433 755 aa19.42■□□□□ 0.7
SNX20-204ENST00000568993 DNAAF4Q8WXU2 420 aa19.42■□□□□ 0.7
SNX20-204ENST00000568993 SRCIN1Q9C0H9 1055 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 DDX21Q9NR30 783 aaKnown RBP eCLIP19.41■□□□□ 0.7
SNX20-204ENST00000568993 SHANK3Q9BYB0 1731 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 ADCY9O60503 1353 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 C5P01031 1676 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 PRAMEF22A3QJZ6 481 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 PI4KAP2A4QPH2 592 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 ERVV-2B6SEH9 535 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 CABP4P57796 275 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 BEND3Q5T5X7 828 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 PI4KAP1Q8N8J0 262 aa19.41■□□□□ 0.7
SNX20-204ENST00000568993 STRN4Q9NRL3 753 aa19.4■□□□□ 0.7
SNX20-204ENST00000568993 SEC24BO95487 1268 aa19.39■□□□□ 0.69
SNX20-204ENST00000568993 PDIA6Q15084 440 aa19.39■□□□□ 0.69
SNX20-204ENST00000568993 ZNF496Q96IT1 587 aaPredicted RBP19.39■□□□□ 0.69
SNX20-204ENST00000568993 ATP8B2P98198 1209 aa19.39■□□□□ 0.69
SNX20-204ENST00000568993 PROSER3Q2NL68 480 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms