RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 IPO8O15397 1037 aaKnown RBP16.16■□□□□ 0.18
GGA2-213ENST00000568922 HSPA1LP34931 641 aa16.16■□□□□ 0.18
GGA2-213ENST00000568922 KRT24Q2M2I5 525 aa16.16■□□□□ 0.18
GGA2-213ENST00000568922 MRPL50Q8N5N7 158 aaKnown RBP16.16■□□□□ 0.18
GGA2-213ENST00000568922 THRAP3Q9Y2W1 955 aaKnown RBP16.16■□□□□ 0.18
GGA2-213ENST00000568922 SLC52A2Q9HAB3 445 aa16.15■□□□□ 0.18
GGA2-213ENST00000568922 NKX1-1Q15270 411 aaPredicted RBP16.15■□□□□ 0.18
GGA2-213ENST00000568922 CDCA7Q9BWT1 371 aaPredicted RBP16.15■□□□□ 0.18
GGA2-213ENST00000568922 SPATA31A1Q5TZJ5 1347 aa16.14■□□□□ 0.17
GGA2-213ENST00000568922 NOB1Q9ULX3 412 aaKnown RBP16.14■□□□□ 0.17
GGA2-213ENST00000568922 LRP6O75581 1613 aa16.14■□□□□ 0.17
GGA2-213ENST00000568922 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.13■□□□□ 0.17
GGA2-213ENST00000568922 EIF4A1P60842 406 aaKnown RBP16.13■□□□□ 0.17
GGA2-213ENST00000568922 ATF7IPQ6VMQ6 1270 aa16.13■□□□□ 0.17
GGA2-213ENST00000568922 ARHGAP45Q92619 1136 aa16.13■□□□□ 0.17
GGA2-213ENST00000568922 HOXB7P09629 217 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 UNC5CLQ8IV45 518 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 NGLY1Q96IV0 654 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 C8orf37Q96NL8 207 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 SPATA31A5Q5VU36 1347 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 SPATA31A7Q8IWB4 1347 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 CACNA1FO60840 1977 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 TRIM27P14373 513 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 DZIP1LQ8IYY4 767 aaKnown RBP16.12■□□□□ 0.17
GGA2-213ENST00000568922 DDX54Q8TDD1 881 aaKnown RBP16.12■□□□□ 0.17
GGA2-213ENST00000568922 PANK1Q8TE04 598 aa16.12■□□□□ 0.17
GGA2-213ENST00000568922 CABP4P57796 275 aa16.11■□□□□ 0.17
GGA2-213ENST00000568922 CCDC30Q5VVM6 783 aa16.11■□□□□ 0.17
GGA2-213ENST00000568922 FTSJ3Q8IY81 847 aaKnown RBP16.11■□□□□ 0.17
GGA2-213ENST00000568922 FNBP4Q8N3X1 1017 aaPredicted RBP16.11■□□□□ 0.17
GGA2-213ENST00000568922 NFATC2IPQ8NCF5 419 aa16.11■□□□□ 0.17
GGA2-213ENST00000568922 BCL9LQ86UU0 1499 aa16.11■□□□□ 0.17
GGA2-213ENST00000568922 ERVV-2B6SEH9 535 aa16.1■□□□□ 0.17
GGA2-213ENST00000568922 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
GGA2-213ENST00000568922 TNS2Q63HR2 1409 aa16.1■□□□□ 0.17
GGA2-213ENST00000568922 EXOC5O00471 708 aa16.1■□□□□ 0.17
GGA2-213ENST00000568922 TCERG1O14776 1098 aaKnown RBP16.1■□□□□ 0.17
GGA2-213ENST00000568922 KCNQ3O43525 872 aa16.1■□□□□ 0.17
GGA2-213ENST00000568922 BARGINQ6ZT62 677 aa16.1■□□□□ 0.17
GGA2-213ENST00000568922 TOGARAM1Q9Y4F4 1720 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 RLBP1P12271 317 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 AAMPQ13685 434 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 VPS72Q15906 364 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 ZNF790Q6PG37 636 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 CLUAP1Q96AJ1 413 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 TNNQ9UQP3 1299 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 COG6Q9Y2V7 657 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 CCDC9Q9Y3X0 531 aaKnown RBP16.09■□□□□ 0.17
GGA2-213ENST00000568922 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
GGA2-213ENST00000568922 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.17
GGA2-213ENST00000568922 MEX3CQ5U5Q3 659 aaKnown RBP16.08■□□□□ 0.16
GGA2-213ENST00000568922 PTPRCP08575 1304 aa16.07■□□□□ 0.16
GGA2-213ENST00000568922 PAPPAQ13219 1627 aa16.07■□□□□ 0.16
GGA2-213ENST00000568922 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
GGA2-213ENST00000568922 MVPQ14764 893 aaKnown RBP16.07■□□□□ 0.16
GGA2-213ENST00000568922 HDGFL1Q5TGJ6 251 aa16.06■□□□□ 0.16
GGA2-213ENST00000568922 TTC5Q8N0Z6 440 aa16.06■□□□□ 0.16
GGA2-213ENST00000568922 USP21Q9UK80 565 aa16.06■□□□□ 0.16
GGA2-213ENST00000568922 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
GGA2-213ENST00000568922 DDB1Q16531 1140 aa16.05■□□□□ 0.16
GGA2-213ENST00000568922 UBR2Q8IWV8 1755 aa16.05■□□□□ 0.16
GGA2-213ENST00000568922 ITGB4P16144 1822 aa16.05■□□□□ 0.16
GGA2-213ENST00000568922 SLC39A6Q13433 755 aa16.05■□□□□ 0.16
GGA2-213ENST00000568922 ABCC4O15439 1325 aa16.05■□□□□ 0.16
GGA2-213ENST00000568922 C5P01031 1676 aa16.04■□□□□ 0.16
GGA2-213ENST00000568922 DDX19BQ9UMR2 479 aa16.04■□□□□ 0.16
GGA2-213ENST00000568922 TMEM57Q8N5G2 664 aa16.03■□□□□ 0.16
GGA2-213ENST00000568922 LAMB4A4D0S4 1761 aa16.03■□□□□ 0.16
GGA2-213ENST00000568922 EIF2S2P20042 333 aaKnown RBP16.03■□□□□ 0.16
GGA2-213ENST00000568922 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
GGA2-213ENST00000568922 NECTIN2Q92692 538 aa16.03■□□□□ 0.16
GGA2-213ENST00000568922 FMNL2Q96PY5 1086 aa16.03■□□□□ 0.16
GGA2-213ENST00000568922 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
GGA2-213ENST00000568922 RGS12O14924 1447 aa16.02■□□□□ 0.16
GGA2-213ENST00000568922 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.16
GGA2-213ENST00000568922 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
GGA2-213ENST00000568922 DOT1LQ8TEK3 1739 aa16.02■□□□□ 0.15
GGA2-213ENST00000568922 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
GGA2-213ENST00000568922 AFF2P51816 1311 aa16.01■□□□□ 0.15
GGA2-213ENST00000568922 SNRPA1P09661 255 aaKnown RBP16.01■□□□□ 0.15
GGA2-213ENST00000568922 G2E3Q7L622 706 aa16.01■□□□□ 0.15
GGA2-213ENST00000568922 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
GGA2-213ENST00000568922 GLI3P10071 1580 aa16.01■□□□□ 0.15
GGA2-213ENST00000568922 FLIIQ13045 1269 aa16■□□□□ 0.15
GGA2-213ENST00000568922 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
GGA2-213ENST00000568922 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
GGA2-213ENST00000568922 THSD7AQ9UPZ6 1657 aa16■□□□□ 0.15
GGA2-213ENST00000568922 CHPF2Q9P2E5 772 aa15.99■□□□□ 0.15
GGA2-213ENST00000568922 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
GGA2-213ENST00000568922 PRAMEF22A3QJZ6 481 aa15.98■□□□□ 0.15
GGA2-213ENST00000568922 INTS3Q68E01 1043 aaKnown RBP15.98■□□□□ 0.15
GGA2-213ENST00000568922 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
GGA2-213ENST00000568922 TRPC5Q9UL62 973 aaPredicted RBP15.98■□□□□ 0.15
GGA2-213ENST00000568922 BCL9O00512 1426 aa15.98■□□□□ 0.15
GGA2-213ENST00000568922 ATRNO75882 1429 aa15.98■□□□□ 0.15
GGA2-213ENST00000568922 MARCH10Q8NA82 808 aaPredicted RBP15.97■□□□□ 0.15
GGA2-213ENST00000568922 PIGBQ92521 554 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms