RNA–Protein interactions for RNA: ENST00000568693.1

E2F4-211, Transcript of E2F transcription factor 4, human

TSL 2

Gene E2F4, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
E2F4-211	ENST00000568693	SPATA31A5	Q5VU36	1347 aa		10.8	□□□□□ -0.68
E2F4-211	ENST00000568693	SPATA31A7	Q8IWB4	1347 aa		10.8	□□□□□ -0.68
E2F4-211	ENST00000568693	SHANK3	Q9BYB0	1731 aa		10.79	□□□□□ -0.68
E2F4-211	ENST00000568693	TNS2	Q63HR2	1409 aa		10.79	□□□□□ -0.68
E2F4-211	ENST00000568693	C1orf141	Q5JVX7	400 aa		10.79	□□□□□ -0.68
E2F4-211	ENST00000568693	MCM10	Q7L590	875 aa		10.79	□□□□□ -0.68
E2F4-211	ENST00000568693	THUMPD2	Q9BTF0	503 aa	Known RBP	10.79	□□□□□ -0.68
E2F4-211	ENST00000568693	IFT57	Q9NWB7	429 aa		10.79	□□□□□ -0.68
E2F4-211	ENST00000568693	PCDH11X	Q9BZA7	1347 aa		10.79	□□□□□ -0.68
E2F4-211	ENST00000568693	PCDH11Y	Q9BZA8	1340 aa		10.79	□□□□□ -0.68
E2F4-211	ENST00000568693	ZNF853	P0CG23	659 aa		10.78	□□□□□ -0.68
E2F4-211	ENST00000568693	DCTN1	Q14203	1278 aa		10.78	□□□□□ -0.68
E2F4-211	ENST00000568693	FAM98C	Q17RN3	349 aa	Known RBP	10.78	□□□□□ -0.68
E2F4-211	ENST00000568693	KRT27	Q7Z3Y8	459 aa		10.78	□□□□□ -0.68
E2F4-211	ENST00000568693	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.78	□□□□□ -0.68
E2F4-211	ENST00000568693	USP35	Q9P2H5	1018 aa		10.78	□□□□□ -0.68
E2F4-211	ENST00000568693	THSD7A	Q9UPZ6	1657 aa		10.78	□□□□□ -0.68
E2F4-211	ENST00000568693	FANCI	Q9NVI1	1328 aa		10.78	□□□□□ -0.68
E2F4-211	ENST00000568693	KDM6A	O15550	1401 aa	Predicted RBP	10.77	□□□□□ -0.68
E2F4-211	ENST00000568693	MRC1	P22897	1456 aa		10.77	□□□□□ -0.69
E2F4-211	ENST00000568693	PHKG2	P15735	406 aa		10.77	□□□□□ -0.69
E2F4-211	ENST00000568693	GNAI1	P63096	354 aa		10.77	□□□□□ -0.69
E2F4-211	ENST00000568693	BARGIN	Q6ZT62	677 aa		10.77	□□□□□ -0.69
E2F4-211	ENST00000568693	IFNL2	Q8IZJ0	200 aa		10.77	□□□□□ -0.69
E2F4-211	ENST00000568693	ZCRB1	Q8TBF4	217 aa	Known RBP	10.77	□□□□□ -0.69
E2F4-211	ENST00000568693	CFAP44	Q96MT7	982 aa		10.77	□□□□□ -0.69
E2F4-211	ENST00000568693	EP400	Q96L91	3159 aa		10.76	□□□□□ -0.69
E2F4-211	ENST00000568693		A0A0G2JS52	829 aa		10.76	□□□□□ -0.69
E2F4-211	ENST00000568693	CYP27B1	O15528	508 aa		10.76	□□□□□ -0.69
E2F4-211	ENST00000568693	HSP90AB1	P08238	724 aa	Known RBP	10.76	□□□□□ -0.69
E2F4-211	ENST00000568693	MYT1	Q01538	1121 aa		10.76	□□□□□ -0.69
E2F4-211	ENST00000568693	IL17RE	Q8NFR9	667 aa		10.76	□□□□□ -0.69
E2F4-211	ENST00000568693	SCN11A	Q9UI33	1791 aa		10.75	□□□□□ -0.69
E2F4-211	ENST00000568693	RNMT	O43148	476 aa	Known RBP	10.75	□□□□□ -0.69
E2F4-211	ENST00000568693	MPRIP	Q6WCQ1	1025 aa		10.75	□□□□□ -0.69
E2F4-211	ENST00000568693	TSR2	Q969E8	191 aa	Known RBP	10.75	□□□□□ -0.69
E2F4-211	ENST00000568693	DCAF5	Q96JK2	942 aa		10.75	□□□□□ -0.69
E2F4-211	ENST00000568693	BABAM1	Q9NWV8	329 aa		10.75	□□□□□ -0.69
E2F4-211	ENST00000568693	SIPA1L3	O60292	1781 aa	Predicted RBP	10.75	□□□□□ -0.69
E2F4-211	ENST00000568693	VIRMA	Q69YN4	1812 aa	Known RBP	10.74	□□□□□ -0.69
E2F4-211	ENST00000568693	CHL1	O00533	1208 aa		10.74	□□□□□ -0.69
E2F4-211	ENST00000568693	CT47B1	P0C2W7	299 aa	Predicted RBP	10.74	□□□□□ -0.69
E2F4-211	ENST00000568693	NKX1-1	Q15270	411 aa	Predicted RBP	10.74	□□□□□ -0.69
E2F4-211	ENST00000568693	MBIP	Q9NS73	344 aa		10.74	□□□□□ -0.69
E2F4-211	ENST00000568693	TEF	Q10587	303 aa		10.73	□□□□□ -0.69
E2F4-211	ENST00000568693	TAF7	Q15545	349 aa	Predicted RBP	10.73	□□□□□ -0.69
E2F4-211	ENST00000568693	LGR6	Q9HBX8	967 aa		10.73	□□□□□ -0.69
E2F4-211	ENST00000568693	TSPYL4	Q9UJ04	414 aa		10.73	□□□□□ -0.69
E2F4-211	ENST00000568693	RCAN3	Q9UKA8	241 aa		10.73	□□□□□ -0.69
E2F4-211	ENST00000568693	LAS1L	Q9Y4W2	734 aa	Known RBP	10.73	□□□□□ -0.69
E2F4-211	ENST00000568693	KDM3B	Q7LBC6	1761 aa		10.72	□□□□□ -0.69
E2F4-211	ENST00000568693	EXOSC9	Q06265	439 aa	Known RBP	10.72	□□□□□ -0.69
E2F4-211	ENST00000568693	EXOC5	O00471	708 aa		10.71	□□□□□ -0.69
E2F4-211	ENST00000568693	SF3B2	Q13435	895 aa	Known RBP	10.71	□□□□□ -0.69
E2F4-211	ENST00000568693	DDB1	Q16531	1140 aa		10.71	□□□□□ -0.69
E2F4-211	ENST00000568693	FAM182B	Q5T319	152 aa		10.71	□□□□□ -0.69
E2F4-211	ENST00000568693	RNF123	Q5XPI4	1314 aa		10.71	□□□□□ -0.69
E2F4-211	ENST00000568693	DEFB132	Q7Z7B7	95 aa		10.71	□□□□□ -0.69
E2F4-211	ENST00000568693	DDX54	Q8TDD1	881 aa	Known RBP	10.71	□□□□□ -0.69
E2F4-211	ENST00000568693	SLC52A2	Q9HAB3	445 aa		10.71	□□□□□ -0.69
E2F4-211	ENST00000568693	TOGARAM1	Q9Y4F4	1720 aa		10.71	□□□□□ -0.69
E2F4-211	ENST00000568693	TNS1	Q9HBL0	1735 aa	Known RBP	10.7	□□□□□ -0.7
E2F4-211	ENST00000568693	ERVV-2	B6SEH9	535 aa		10.7	□□□□□ -0.7
E2F4-211	ENST00000568693	PAPPA	Q13219	1627 aa		10.69	□□□□□ -0.7
E2F4-211	ENST00000568693	SOS1	Q07889	1333 aa	Predicted RBP	10.69	□□□□□ -0.7
E2F4-211	ENST00000568693	BTBD11	A6QL63	1104 aa		10.69	□□□□□ -0.7
E2F4-211	ENST00000568693	ZNF428	Q96B54	188 aa		10.69	□□□□□ -0.7
E2F4-211	ENST00000568693	MIS18A	Q9NYP9	233 aa		10.69	□□□□□ -0.7
E2F4-211	ENST00000568693	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.69	□□□□□ -0.7
E2F4-211	ENST00000568693	RARS	P54136	660 aa	Known RBP	10.68	□□□□□ -0.7
E2F4-211	ENST00000568693	CABP4	P57796	275 aa		10.68	□□□□□ -0.7
E2F4-211	ENST00000568693	TWISTNB	Q3B726	338 aa	Predicted RBP	10.68	□□□□□ -0.7
E2F4-211	ENST00000568693	C8orf58	Q8NAV2	365 aa		10.68	□□□□□ -0.7
E2F4-211	ENST00000568693	DOT1L	Q8TEK3	1739 aa		10.67	□□□□□ -0.7
E2F4-211	ENST00000568693	BAG6	P46379	1132 aa		10.67	□□□□□ -0.7
E2F4-211	ENST00000568693	RRP1	P56182	461 aa	Known RBP	10.67	□□□□□ -0.7
E2F4-211	ENST00000568693	FAM196A	Q6ZSG2	479 aa		10.67	□□□□□ -0.7
E2F4-211	ENST00000568693	KLHL34	Q8N239	644 aa		10.67	□□□□□ -0.7
E2F4-211	ENST00000568693	TSPYL6	Q8N831	410 aa		10.67	□□□□□ -0.7
E2F4-211	ENST00000568693	NFATC2IP	Q8NCF5	419 aa		10.67	□□□□□ -0.7
E2F4-211	ENST00000568693	BCL9	O00512	1426 aa		10.67	□□□□□ -0.7
E2F4-211	ENST00000568693	VAMP4	O75379	141 aa		10.66	□□□□□ -0.7
E2F4-211	ENST00000568693	HOXB7	P09629	217 aa		10.66	□□□□□ -0.7
E2F4-211	ENST00000568693	EIF4A1	P60842	406 aa	Known RBP	10.66	□□□□□ -0.7
E2F4-211	ENST00000568693	KRT24	Q2M2I5	525 aa		10.66	□□□□□ -0.7
E2F4-211	ENST00000568693	ALDH1L2	Q3SY69	923 aa		10.66	□□□□□ -0.7
E2F4-211	ENST00000568693	ZNF790	Q6PG37	636 aa		10.66	□□□□□ -0.7
E2F4-211	ENST00000568693	MARCH10	Q8NA82	808 aa	Predicted RBP	10.66	□□□□□ -0.7
E2F4-211	ENST00000568693	SPOCK2	Q92563	424 aa		10.66	□□□□□ -0.7
E2F4-211	ENST00000568693	UBR2	Q8IWV8	1755 aa		10.66	□□□□□ -0.7
E2F4-211	ENST00000568693	HEG1	Q9ULI3	1381 aa		10.65	□□□□□ -0.7
E2F4-211	ENST00000568693	TMOD3	Q9NYL9	352 aa		10.65	□□□□□ -0.7
E2F4-211	ENST00000568693	ITGB4	P16144	1822 aa		10.65	□□□□□ -0.71
E2F4-211	ENST00000568693	KCP	Q6ZWJ8	1503 aa		10.64	□□□□□ -0.71
E2F4-211	ENST00000568693	ELL2	O00472	640 aa	Predicted RBP	10.64	□□□□□ -0.71
E2F4-211	ENST00000568693	KCNQ3	O43525	872 aa		10.64	□□□□□ -0.71
E2F4-211	ENST00000568693	BCAR3	O75815	825 aa		10.64	□□□□□ -0.71
E2F4-211	ENST00000568693	TRIM37	O94972	964 aa		10.64	□□□□□ -0.71
E2F4-211	ENST00000568693	NEFL	P07196	543 aa		10.64	□□□□□ -0.71
E2F4-211	ENST00000568693	BRPF1	P55201	1214 aa	Predicted RBP	10.64	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms