RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 GRIN3BO60391 1043 aa15.08■□□□□ 0
CDH3-206ENST00000567674 SSFA2P28290 1259 aa15.08■□□□□ 0
CDH3-206ENST00000567674 CC2D1BQ5T0F9 858 aaKnown RBP15.08■□□□□ 0
CDH3-206ENST00000567674 RC3H1Q5TC82 1133 aaKnown RBP15.08■□□□□ 0
CDH3-206ENST00000567674 CFAP53Q96M91 514 aa15.08■□□□□ 0
CDH3-206ENST00000567674 CABP4P57796 275 aa15.07■□□□□ 0
CDH3-206ENST00000567674 ATG3Q9NT62 314 aa15.07■□□□□ 0
CDH3-206ENST00000567674 TOGARAM1Q9Y4F4 1720 aa15.06■□□□□ 0
CDH3-206ENST00000567674 ADRA2BP18089 450 aa15.06■□□□□ 0
CDH3-206ENST00000567674 AK7Q96M32 723 aa15.06■□□□□ 0
CDH3-206ENST00000567674 NUDCQ9Y266 331 aa15.06■□□□□ 0
CDH3-206ENST00000567674 GPBP1L1Q9HC44 474 aaPredicted RBP15.05■□□□□ -0
CDH3-206ENST00000567674 ASAP1Q9ULH1 1129 aa15.05■□□□□ -0
CDH3-206ENST00000567674 ATP10DQ9P241 1426 aa15.05■□□□□ -0
CDH3-206ENST00000567674 C5P01031 1676 aa15.05■□□□□ -0
CDH3-206ENST00000567674 ATP6V1AP38606 617 aa15.04■□□□□ -0
CDH3-206ENST00000567674 COL23A1Q86Y22 540 aaPredicted RBP15.04■□□□□ -0
CDH3-206ENST00000567674 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
CDH3-206ENST00000567674 KLHL34Q8N239 644 aa15.04■□□□□ -0
CDH3-206ENST00000567674 TAF1LQ8IZX4 1826 aa15.03■□□□□ -0
CDH3-206ENST00000567674 KDM6AO15550 1401 aaPredicted RBP15.03■□□□□ -0
CDH3-206ENST00000567674 GAS2L2Q8NHY3 880 aa15.03■□□□□ -0
CDH3-206ENST00000567674 CNTNAP4Q9C0A0 1308 aa15.02■□□□□ -0
CDH3-206ENST00000567674 VSIG10Q8N0Z9 540 aa15.02■□□□□ -0
CDH3-206ENST00000567674 SLC52A2Q9HAB3 445 aa15.02■□□□□ -0
CDH3-206ENST00000567674 C4BP0C0L5 1744 aa15.02□□□□□ -0.01
CDH3-206ENST00000567674 COL3A1P02461 1466 aaPredicted RBP15.01□□□□□ -0.01
CDH3-206ENST00000567674 FCHSD2O94868 740 aa15.01□□□□□ -0.01
CDH3-206ENST00000567674 KCNQ4P56696 695 aa15.01□□□□□ -0.01
CDH3-206ENST00000567674 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
CDH3-206ENST00000567674 CD2APQ9Y5K6 639 aa15.01□□□□□ -0.01
CDH3-206ENST00000567674 YBX3P16989 372 aaKnown RBP eCLIP15□□□□□ -0.01
CDH3-206ENST00000567674 NLGN2Q8NFZ4 835 aa15□□□□□ -0.01
CDH3-206ENST00000567674 RTCBQ9Y3I0 505 aaKnown RBP15□□□□□ -0.01
CDH3-206ENST00000567674 CICQ96RK0 1608 aaPredicted RBP14.99□□□□□ -0.01
CDH3-206ENST00000567674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.99□□□□□ -0.01
CDH3-206ENST00000567674 RNMTO43148 476 aaKnown RBP14.99□□□□□ -0.01
CDH3-206ENST00000567674 RPS6KA4O75676 772 aa14.99□□□□□ -0.01
CDH3-206ENST00000567674 PPP2R1AP30153 589 aa14.99□□□□□ -0.01
CDH3-206ENST00000567674 MTHFSDQ2M296 383 aaKnown RBP14.99□□□□□ -0.01
CDH3-206ENST00000567674 NLGN1Q8N2Q7 840 aa14.99□□□□□ -0.01
CDH3-206ENST00000567674 LINC00116Q8NCU8 138 aa14.99□□□□□ -0.01
CDH3-206ENST00000567674 PNNQ9H307 717 aaKnown RBP14.99□□□□□ -0.01
CDH3-206ENST00000567674 MRC1P22897 1456 aa14.99□□□□□ -0.01
CDH3-206ENST00000567674 ADAMTS7Q9UKP4 1686 aa14.98□□□□□ -0.01
CDH3-206ENST00000567674 MSH5O43196 834 aa14.98□□□□□ -0.01
CDH3-206ENST00000567674 HTATSF1O43719 755 aaKnown RBP14.98□□□□□ -0.01
CDH3-206ENST00000567674 HMOX1P09601 288 aa14.98□□□□□ -0.01
CDH3-206ENST00000567674 ITPK1Q13572 414 aa14.98□□□□□ -0.01
CDH3-206ENST00000567674 TRAPPC3LQ5T215 181 aa14.98□□□□□ -0.01
CDH3-206ENST00000567674 ADCY9O60503 1353 aa14.98□□□□□ -0.01
CDH3-206ENST00000567674 TUBGCP6Q96RT7 1819 aa14.97□□□□□ -0.01
CDH3-206ENST00000567674 GNAT3A8MTJ3 354 aa14.97□□□□□ -0.01
CDH3-206ENST00000567674 RBM42Q9BTD8 480 aaKnown RBP14.97□□□□□ -0.01
CDH3-206ENST00000567674 SCN11AQ9UI33 1791 aa14.97□□□□□ -0.01
CDH3-206ENST00000567674 UBR3Q6ZT12 1888 aa14.97□□□□□ -0.01
CDH3-206ENST00000567674 U2SURPO15042 1029 aaKnown RBP14.96□□□□□ -0.01
CDH3-206ENST00000567674 GNPATO15228 680 aa14.96□□□□□ -0.01
CDH3-206ENST00000567674 APLP1P51693 650 aa14.96□□□□□ -0.01
CDH3-206ENST00000567674 RALBP1Q15311 655 aa14.96□□□□□ -0.01
CDH3-206ENST00000567674 TEX13AQ9BXU3 409 aaPredicted RBP14.96□□□□□ -0.01
CDH3-206ENST00000567674 SLC4A9Q96Q91 983 aa14.95□□□□□ -0.02
CDH3-206ENST00000567674 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
CDH3-206ENST00000567674 LGR6Q9HBX8 967 aa14.94□□□□□ -0.02
CDH3-206ENST00000567674 CEMIPQ8WUJ3 1361 aa14.94□□□□□ -0.02
CDH3-206ENST00000567674 NEFMP07197 916 aa14.93□□□□□ -0.02
CDH3-206ENST00000567674 RFC4P35249 363 aa14.93□□□□□ -0.02
CDH3-206ENST00000567674 ZEB1P37275 1124 aaPredicted RBP14.93□□□□□ -0.02
CDH3-206ENST00000567674 TEFQ10587 303 aa14.93□□□□□ -0.02
CDH3-206ENST00000567674 ZNF526Q8TF50 670 aaPredicted RBP14.93□□□□□ -0.02
CDH3-206ENST00000567674 COL5A3P25940 1745 aaPredicted RBP14.92□□□□□ -0.02
CDH3-206ENST00000567674 PTCD1O75127 700 aaKnown RBP14.92□□□□□ -0.02
CDH3-206ENST00000567674 DNAJC5GQ8N7S2 189 aa14.92□□□□□ -0.02
CDH3-206ENST00000567674 ARHGEF1Q92888 912 aaKnown RBP14.92□□□□□ -0.02
CDH3-206ENST00000567674 STARD3NLO95772 234 aa14.91□□□□□ -0.02
CDH3-206ENST00000567674 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
CDH3-206ENST00000567674 CRKLP46109 303 aaKnown RBP14.91□□□□□ -0.02
CDH3-206ENST00000567674 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.02
CDH3-206ENST00000567674 TTC5Q8N0Z6 440 aa14.91□□□□□ -0.02
CDH3-206ENST00000567674 IL17REQ8NFR9 667 aa14.91□□□□□ -0.02
CDH3-206ENST00000567674 PHF14O94880 888 aa14.9□□□□□ -0.02
CDH3-206ENST00000567674 PRKAR2BP31323 418 aa14.9□□□□□ -0.02
CDH3-206ENST00000567674 TGFB2P61812 414 aa14.9□□□□□ -0.02
CDH3-206ENST00000567674 ZNF790Q6PG37 636 aa14.9□□□□□ -0.02
CDH3-206ENST00000567674 RTF1Q92541 710 aaKnown RBP14.9□□□□□ -0.02
CDH3-206ENST00000567674 KIF3CO14782 793 aa14.89□□□□□ -0.03
CDH3-206ENST00000567674 CYP19A1P11511 503 aaPredicted RBP14.89□□□□□ -0.03
CDH3-206ENST00000567674 PRELPP51888 382 aa14.89□□□□□ -0.03
CDH3-206ENST00000567674 AMIGO3Q86WK7 504 aa14.89□□□□□ -0.03
CDH3-206ENST00000567674 CCDC87Q9NVE4 849 aa14.89□□□□□ -0.03
CDH3-206ENST00000567674 RGL2O15211 777 aa14.88□□□□□ -0.03
CDH3-206ENST00000567674 CAPN15O75808 1086 aa14.88□□□□□ -0.03
CDH3-206ENST00000567674 GYS1P13807 737 aa14.88□□□□□ -0.03
CDH3-206ENST00000567674 COL13A1Q5TAT6 717 aaPredicted RBP14.88□□□□□ -0.03
CDH3-206ENST00000567674 INTS5Q6P9B9 1019 aaKnown RBP14.88□□□□□ -0.03
CDH3-206ENST00000567674 A0A087WZG4 1122 aa14.87□□□□□ -0.03
CDH3-206ENST00000567674 PHACTR3Q96KR7 559 aa14.87□□□□□ -0.03
CDH3-206ENST00000567674 FMNL2Q96PY5 1086 aa14.87□□□□□ -0.03
CDH3-206ENST00000567674 USP42Q9H9J4 1324 aaKnown RBP14.87□□□□□ -0.03
CDH3-206ENST00000567674 PNISRQ8TF01 805 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms