RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CABP4P57796 275 aa25.29■■□□□ 1.64
LINC01238-205ENST00000567549 ZNF831Q5JPB2 1677 aa25.29■■□□□ 1.64
LINC01238-205ENST00000567549 GNPATO15228 680 aa25.28■■□□□ 1.64
LINC01238-205ENST00000567549 NLGN2Q8NFZ4 835 aa25.28■■□□□ 1.64
LINC01238-205ENST00000567549 MTHFSP49914 203 aa25.27■■□□□ 1.64
LINC01238-205ENST00000567549 ATG3Q9NT62 314 aa25.27■■□□□ 1.64
LINC01238-205ENST00000567549 LINC00116Q8NCU8 138 aa25.26■■□□□ 1.63
LINC01238-205ENST00000567549 RTCBQ9Y3I0 505 aaKnown RBP25.26■■□□□ 1.63
LINC01238-205ENST00000567549 ADRA2BP18089 450 aa25.25■■□□□ 1.63
LINC01238-205ENST00000567549 RBM42Q9BTD8 480 aaKnown RBP25.25■■□□□ 1.63
LINC01238-205ENST00000567549 SULT6B1Q6IMI4 303 aa25.24■■□□□ 1.63
LINC01238-205ENST00000567549 KDRP35968 1356 aa25.23■■□□□ 1.63
LINC01238-205ENST00000567549 KIF7Q2M1P5 1343 aa25.23■■□□□ 1.63
LINC01238-205ENST00000567549 RC3H1Q5TC82 1133 aaKnown RBP25.23■■□□□ 1.63
LINC01238-205ENST00000567549 AMER1Q5JTC6 1135 aaPredicted RBP25.22■■□□□ 1.63
LINC01238-205ENST00000567549 TRAPPC3LQ5T215 181 aa25.22■■□□□ 1.63
LINC01238-205ENST00000567549 ITPK1Q13572 414 aa25.21■■□□□ 1.63
LINC01238-205ENST00000567549 CNTNAP4Q9C0A0 1308 aa25.2■■□□□ 1.62
LINC01238-205ENST00000567549 IL13P35225 146 aa25.2■■□□□ 1.62
LINC01238-205ENST00000567549 NLGN1Q8N2Q7 840 aa25.2■■□□□ 1.62
LINC01238-205ENST00000567549 KDM6AO15550 1401 aaPredicted RBP25.19■■□□□ 1.62
LINC01238-205ENST00000567549 AKAP4Q5JQC9 854 aa25.18■■□□□ 1.62
LINC01238-205ENST00000567549 UTRNP46939 3433 aa25.18■■□□□ 1.62
LINC01238-205ENST00000567549 RFC4P35249 363 aa25.17■■□□□ 1.62
LINC01238-205ENST00000567549 AEBP1Q8IUX7 1158 aa25.17■■□□□ 1.62
LINC01238-205ENST00000567549 YBX3P16989 372 aaKnown RBP eCLIP25.16■■□□□ 1.62
LINC01238-205ENST00000567549 COL5A3P25940 1745 aaPredicted RBP25.15■■□□□ 1.62
LINC01238-205ENST00000567549 GIGYF1O75420 1035 aaPredicted RBP25.15■■□□□ 1.62
LINC01238-205ENST00000567549 RPS6KA4O75676 772 aa25.15■■□□□ 1.62
LINC01238-205ENST00000567549 SCN11AQ9UI33 1791 aa25.14■■□□□ 1.62
LINC01238-205ENST00000567549 DIAPH1O60610 1272 aaKnown RBP25.14■■□□□ 1.62
LINC01238-205ENST00000567549 AMIGO3Q86WK7 504 aa25.14■■□□□ 1.62
LINC01238-205ENST00000567549 NFATC2IPQ8NCF5 419 aa25.14■■□□□ 1.62
LINC01238-205ENST00000567549 NPC1L1Q9UHC9 1359 aa25.14■■□□□ 1.61
LINC01238-205ENST00000567549 MMP10P09238 476 aa25.13■■□□□ 1.61
LINC01238-205ENST00000567549 PTCD1O75127 700 aaKnown RBP25.12■■□□□ 1.61
LINC01238-205ENST00000567549 CCDC87Q9NVE4 849 aa25.11■■□□□ 1.61
LINC01238-205ENST00000567549 PER1O15534 1290 aaPredicted RBP25.1■■□□□ 1.61
LINC01238-205ENST00000567549 C1QTNF8P60827 252 aa25.1■■□□□ 1.61
LINC01238-205ENST00000567549 TGFB2P61812 414 aa25.1■■□□□ 1.61
LINC01238-205ENST00000567549 CC2D1BQ5T0F9 858 aaKnown RBP25.1■■□□□ 1.61
LINC01238-205ENST00000567549 ARHGEF1Q92888 912 aaKnown RBP25.1■■□□□ 1.61
LINC01238-205ENST00000567549 PARP3Q9Y6F1 533 aa25.1■■□□□ 1.61
LINC01238-205ENST00000567549 CICQ96RK0 1608 aaPredicted RBP25.1■■□□□ 1.61
LINC01238-205ENST00000567549 SLC52A2Q9HAB3 445 aa25.09■■□□□ 1.61
LINC01238-205ENST00000567549 CRKLP46109 303 aaKnown RBP25.08■■□□□ 1.61
LINC01238-205ENST00000567549 SMIM5Q71RC9 77 aa25.08■■□□□ 1.61
LINC01238-205ENST00000567549 SLC4A9Q96Q91 983 aa25.08■■□□□ 1.61
LINC01238-205ENST00000567549 GOLGB1Q14789 3259 aaKnown RBP25.07■■□□□ 1.6
LINC01238-205ENST00000567549 HMOX1P09601 288 aa25.06■■□□□ 1.6
LINC01238-205ENST00000567549 KIF13BQ9NQT8 1826 aa25.06■■□□□ 1.6
LINC01238-205ENST00000567549 GYS1P13807 737 aa25.05■■□□□ 1.6
LINC01238-205ENST00000567549 MRC1P22897 1456 aa25.04■■□□□ 1.6
LINC01238-205ENST00000567549 RNMTO43148 476 aaKnown RBP25.04■■□□□ 1.6
LINC01238-205ENST00000567549 CFAP53Q96M91 514 aa25.04■■□□□ 1.6
LINC01238-205ENST00000567549 MYH14Q7Z406 1995 aaKnown RBP25.04■■□□□ 1.6
LINC01238-205ENST00000567549 C4AP0C0L4 1744 aa25.03■■□□□ 1.6
LINC01238-205ENST00000567549 SENP3-EIF4A1A0A087X0R7 540 aa25.03■■□□□ 1.6
LINC01238-205ENST00000567549 GPBP1L1Q9HC44 474 aaPredicted RBP25.03■■□□□ 1.6
LINC01238-205ENST00000567549 VIRMAQ69YN4 1812 aaKnown RBP25.02■■□□□ 1.6
LINC01238-205ENST00000567549 ZPR1O75312 459 aa25.02■■□□□ 1.6
LINC01238-205ENST00000567549 GAS2L2Q8NHY3 880 aa25.02■■□□□ 1.6
LINC01238-205ENST00000567549 C10orf71Q711Q0 1435 aa25.02■■□□□ 1.6
LINC01238-205ENST00000567549 ATP10DQ9P241 1426 aa25.02■■□□□ 1.6
LINC01238-205ENST00000567549 TTC5Q8N0Z6 440 aa25.01■■□□□ 1.59
LINC01238-205ENST00000567549 VSIG10Q8N0Z9 540 aa25.01■■□□□ 1.59
LINC01238-205ENST00000567549 TJP1Q07157 1748 aa25■■□□□ 1.59
LINC01238-205ENST00000567549 U2SURPO15042 1029 aaKnown RBP25■■□□□ 1.59
LINC01238-205ENST00000567549 USP42Q9H9J4 1324 aaKnown RBP25■■□□□ 1.59
LINC01238-205ENST00000567549 PXDNLA1KZ92 1463 aa24.99■■□□□ 1.59
LINC01238-205ENST00000567549 MTHFSDQ2M296 383 aaKnown RBP24.99■■□□□ 1.59
LINC01238-205ENST00000567549 NUDCQ9Y266 331 aa24.99■■□□□ 1.59
LINC01238-205ENST00000567549 LGR6Q9HBX8 967 aa24.98■■□□□ 1.59
LINC01238-205ENST00000567549 TEFQ10587 303 aa24.97■■□□□ 1.59
LINC01238-205ENST00000567549 BCS1LQ9Y276 419 aa24.97■■□□□ 1.59
LINC01238-205ENST00000567549 ADAMTS7Q9UKP4 1686 aa24.97■■□□□ 1.59
LINC01238-205ENST00000567549 ADCY9O60503 1353 aa24.96■■□□□ 1.59
LINC01238-205ENST00000567549 GNAT3A8MTJ3 354 aa24.96■■□□□ 1.59
LINC01238-205ENST00000567549 STARD3NLO95772 234 aa24.95■■□□□ 1.58
LINC01238-205ENST00000567549 INTS5Q6P9B9 1019 aaKnown RBP24.95■■□□□ 1.58
LINC01238-205ENST00000567549 DNAJC10Q8IXB1 793 aa24.95■■□□□ 1.58
LINC01238-205ENST00000567549 TEX13AQ9BXU3 409 aaPredicted RBP24.95■■□□□ 1.58
LINC01238-205ENST00000567549 WWC3Q9ULE0 1092 aa24.94■■□□□ 1.58
LINC01238-205ENST00000567549 N4BP2Q86UW6 1770 aaPredicted RBP24.94■■□□□ 1.58
LINC01238-205ENST00000567549 A0A0G2JLW4 131 aa24.93■■□□□ 1.58
LINC01238-205ENST00000567549 FCHSD2O94868 740 aa24.93■■□□□ 1.58
LINC01238-205ENST00000567549 CYP19A1P11511 503 aaPredicted RBP24.93■■□□□ 1.58
LINC01238-205ENST00000567549 NPM2Q86SE8 214 aaKnown RBP24.93■■□□□ 1.58
LINC01238-205ENST00000567549 PIM2Q9P1W9 311 aa24.93■■□□□ 1.58
LINC01238-205ENST00000567549 COL3A1P02461 1466 aaPredicted RBP24.93■■□□□ 1.58
LINC01238-205ENST00000567549 SOS1Q07889 1333 aaPredicted RBP24.92■■□□□ 1.58
LINC01238-205ENST00000567549 SLC39A6Q13433 755 aa24.92■■□□□ 1.58
LINC01238-205ENST00000567549 CNGB1Q14028 1251 aaPredicted RBP24.92■■□□□ 1.58
LINC01238-205ENST00000567549 SRP68Q9UHB9 627 aaKnown RBP24.92■■□□□ 1.58
LINC01238-205ENST00000567549 A0A087WZG4 1122 aa24.91■■□□□ 1.58
LINC01238-205ENST00000567549 DPEP1P16444 411 aa24.91■■□□□ 1.58
LINC01238-205ENST00000567549 FKBP8Q14318 412 aa24.91■■□□□ 1.58
LINC01238-205ENST00000567549 KIAA1551Q9HCM1 1747 aa24.91■■□□□ 1.58
LINC01238-205ENST00000567549 COL15A1P39059 1388 aa24.91■■□□□ 1.58
LINC01238-205ENST00000567549 KCPQ6ZWJ8 1503 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms