RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
CFDP1-207ENST00000566901 RTF1Q92541 710 aaKnown RBP16.26■□□□□ 0.19
CFDP1-207ENST00000566901 FANCIQ9NVI1 1328 aa16.25■□□□□ 0.19
CFDP1-207ENST00000566901 AKAP4Q5JQC9 854 aa16.25■□□□□ 0.19
CFDP1-207ENST00000566901 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
CFDP1-207ENST00000566901 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
CFDP1-207ENST00000566901 CEMIPQ8WUJ3 1361 aa16.25■□□□□ 0.19
CFDP1-207ENST00000566901 EZH2Q15910 746 aaKnown RBP16.24■□□□□ 0.19
CFDP1-207ENST00000566901 FAM196AQ6ZSG2 479 aa16.24■□□□□ 0.19
CFDP1-207ENST00000566901 TOM1L2Q6ZVM7 507 aa16.24■□□□□ 0.19
CFDP1-207ENST00000566901 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
CFDP1-207ENST00000566901 WNK3Q9BYP7 1800 aa16.24■□□□□ 0.19
CFDP1-207ENST00000566901 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
CFDP1-207ENST00000566901 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
CFDP1-207ENST00000566901 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
CFDP1-207ENST00000566901 APBA3O96018 575 aa16.22■□□□□ 0.19
CFDP1-207ENST00000566901 LARP1Q6PKG0 1096 aaKnown RBP16.22■□□□□ 0.19
CFDP1-207ENST00000566901 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
CFDP1-207ENST00000566901 CHL1O00533 1208 aa16.2■□□□□ 0.18
CFDP1-207ENST00000566901 NEFLP07196 543 aa16.2■□□□□ 0.18
CFDP1-207ENST00000566901 IL2RBP14784 551 aa16.2■□□□□ 0.18
CFDP1-207ENST00000566901 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
CFDP1-207ENST00000566901 THUMPD2Q9BTF0 503 aaKnown RBP16.2■□□□□ 0.18
CFDP1-207ENST00000566901 SUPT16HQ9Y5B9 1047 aaKnown RBP16.2■□□□□ 0.18
CFDP1-207ENST00000566901 MRC1P22897 1456 aa16.2■□□□□ 0.18
CFDP1-207ENST00000566901 RREB1Q92766 1687 aa16.2■□□□□ 0.18
CFDP1-207ENST00000566901 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
CFDP1-207ENST00000566901 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
CFDP1-207ENST00000566901 DCTN1Q14203 1278 aa16.19■□□□□ 0.18
CFDP1-207ENST00000566901 MCM10Q7L590 875 aa16.19■□□□□ 0.18
CFDP1-207ENST00000566901 THRAP3Q9Y2W1 955 aaKnown RBP16.19■□□□□ 0.18
CFDP1-207ENST00000566901 SHANK3Q9BYB0 1731 aa16.19■□□□□ 0.18
CFDP1-207ENST00000566901 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
CFDP1-207ENST00000566901 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
CFDP1-207ENST00000566901 SCN11AQ9UI33 1791 aa16.18■□□□□ 0.18
CFDP1-207ENST00000566901 IFNL2Q8IZJ0 200 aa16.18■□□□□ 0.18
CFDP1-207ENST00000566901 IL17REQ8NFR9 667 aa16.18■□□□□ 0.18
CFDP1-207ENST00000566901 TSR2Q969E8 191 aaKnown RBP16.18■□□□□ 0.18
CFDP1-207ENST00000566901 CDCA7Q9BWT1 371 aaPredicted RBP16.18■□□□□ 0.18
CFDP1-207ENST00000566901 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
CFDP1-207ENST00000566901 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
CFDP1-207ENST00000566901 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
CFDP1-207ENST00000566901 PHKG2P15735 406 aa16.17■□□□□ 0.18
CFDP1-207ENST00000566901 SOS1Q07889 1333 aaPredicted RBP16.17■□□□□ 0.18
CFDP1-207ENST00000566901 RRP1P56182 461 aaKnown RBP16.16■□□□□ 0.18
CFDP1-207ENST00000566901 EXOSC9Q06265 439 aaKnown RBP16.16■□□□□ 0.18
CFDP1-207ENST00000566901 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
CFDP1-207ENST00000566901 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
CFDP1-207ENST00000566901 BARGINQ6ZT62 677 aa16.16■□□□□ 0.18
CFDP1-207ENST00000566901 CAMKK2Q96RR4 588 aa16.16■□□□□ 0.18
CFDP1-207ENST00000566901 KDM3BQ7LBC6 1761 aa16.15■□□□□ 0.18
CFDP1-207ENST00000566901 KDM6AO15550 1401 aaPredicted RBP16.15■□□□□ 0.18
CFDP1-207ENST00000566901 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
CFDP1-207ENST00000566901 TAF7Q15545 349 aaPredicted RBP16.15■□□□□ 0.18
CFDP1-207ENST00000566901 TNS2Q63HR2 1409 aa16.15■□□□□ 0.18
CFDP1-207ENST00000566901 ZCRB1Q8TBF4 217 aaKnown RBP16.15■□□□□ 0.18
CFDP1-207ENST00000566901 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
CFDP1-207ENST00000566901 CYP27B1O15528 508 aa16.14■□□□□ 0.17
CFDP1-207ENST00000566901 RARSP54136 660 aaKnown RBP16.14■□□□□ 0.17
CFDP1-207ENST00000566901 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
CFDP1-207ENST00000566901 DCAF5Q96JK2 942 aa16.14■□□□□ 0.17
CFDP1-207ENST00000566901 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.17
CFDP1-207ENST00000566901 TEFQ10587 303 aa16.13■□□□□ 0.17
CFDP1-207ENST00000566901 NKX1-1Q15270 411 aaPredicted RBP16.13■□□□□ 0.17
CFDP1-207ENST00000566901 ALDH1L2Q3SY69 923 aa16.13■□□□□ 0.17
CFDP1-207ENST00000566901 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
CFDP1-207ENST00000566901 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
CFDP1-207ENST00000566901 BRPF1P55201 1214 aaPredicted RBP16.12■□□□□ 0.17
CFDP1-207ENST00000566901 SBF2Q86WG5 1849 aa16.11■□□□□ 0.17
CFDP1-207ENST00000566901 MPRIPQ6WCQ1 1025 aa16.11■□□□□ 0.17
CFDP1-207ENST00000566901 LGR6Q9HBX8 967 aa16.11■□□□□ 0.17
CFDP1-207ENST00000566901 KAT6BQ8WYB5 2073 aa16.1■□□□□ 0.17
CFDP1-207ENST00000566901 VAMP4O75379 141 aa16.09■□□□□ 0.17
CFDP1-207ENST00000566901 HOXB7P09629 217 aa16.09■□□□□ 0.17
CFDP1-207ENST00000566901 TWISTNBQ3B726 338 aaPredicted RBP16.09■□□□□ 0.17
CFDP1-207ENST00000566901 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
CFDP1-207ENST00000566901 ERVV-2B6SEH9 535 aa16.08■□□□□ 0.16
CFDP1-207ENST00000566901 CHMP4AQ9BY43 222 aa16.08■□□□□ 0.16
CFDP1-207ENST00000566901 KIF16BQ96L93 1317 aa16.08■□□□□ 0.16
CFDP1-207ENST00000566901 DDB1Q16531 1140 aa16.07■□□□□ 0.16
CFDP1-207ENST00000566901 C8orf58Q8NAV2 365 aa16.07■□□□□ 0.16
CFDP1-207ENST00000566901 PAPPAQ13219 1627 aa16.07■□□□□ 0.16
CFDP1-207ENST00000566901 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
CFDP1-207ENST00000566901 RGPD4Q7Z3J3 1758 aa16.07■□□□□ 0.16
CFDP1-207ENST00000566901 TOGARAM1Q9Y4F4 1720 aa16.06■□□□□ 0.16
CFDP1-207ENST00000566901 HEG1Q9ULI3 1381 aa16.06■□□□□ 0.16
CFDP1-207ENST00000566901 FKBP8Q14318 412 aa16.06■□□□□ 0.16
CFDP1-207ENST00000566901 SPON1Q9HCB6 807 aa16.06■□□□□ 0.16
CFDP1-207ENST00000566901 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
CFDP1-207ENST00000566901 EXOC5O00471 708 aa16.05■□□□□ 0.16
CFDP1-207ENST00000566901 BCAR3O75815 825 aa16.05■□□□□ 0.16
CFDP1-207ENST00000566901 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
CFDP1-207ENST00000566901 TSPYL6Q8N831 410 aa16.05■□□□□ 0.16
CFDP1-207ENST00000566901 SSH1Q8WYL5 1049 aa16.05■□□□□ 0.16
CFDP1-207ENST00000566901 SMC4Q9NTJ3 1288 aa16.05■□□□□ 0.16
CFDP1-207ENST00000566901 MS4A1P11836 297 aa16.04■□□□□ 0.16
CFDP1-207ENST00000566901 YY1P25490 414 aa16.04■□□□□ 0.16
CFDP1-207ENST00000566901 EIF4A1P60842 406 aaKnown RBP16.04■□□□□ 0.16
CFDP1-207ENST00000566901 MIS18AQ9NYP9 233 aa16.04■□□□□ 0.16
CFDP1-207ENST00000566901 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms