RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 CDCA8Q53HL2 280 aa22.48■■□□□ 1.19
EDC3-212ENST00000566828 KDRP35968 1356 aa22.48■■□□□ 1.19
EDC3-212ENST00000566828 KIF3CO14782 793 aa22.47■■□□□ 1.19
EDC3-212ENST00000566828 ATP6V1AP38606 617 aa22.47■■□□□ 1.19
EDC3-212ENST00000566828 EYA1Q99502 592 aa22.47■■□□□ 1.19
EDC3-212ENST00000566828 C10orf71Q711Q0 1435 aa22.47■■□□□ 1.19
EDC3-212ENST00000566828 MMP10P09238 476 aa22.46■■□□□ 1.19
EDC3-212ENST00000566828 PHKG2P15735 406 aa22.46■■□□□ 1.19
EDC3-212ENST00000566828 WASHC2AQ641Q2 1341 aa22.45■■□□□ 1.18
EDC3-212ENST00000566828 ARFGEF1Q9Y6D6 1849 aa22.45■■□□□ 1.18
EDC3-212ENST00000566828 IFNL2Q8IZJ0 200 aa22.44■■□□□ 1.18
EDC3-212ENST00000566828 ATG3Q9NT62 314 aa22.43■■□□□ 1.18
EDC3-212ENST00000566828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.43■■□□□ 1.183e-7■■■□□ 15.5
EDC3-212ENST00000566828 WDR90Q96KV7 1748 aa22.43■■□□□ 1.18
EDC3-212ENST00000566828 MYH14Q7Z406 1995 aaKnown RBP22.42■■□□□ 1.18
EDC3-212ENST00000566828 BCS1LQ9Y276 419 aa22.41■■□□□ 1.18
EDC3-212ENST00000566828 TJP1Q07157 1748 aa22.4■■□□□ 1.18
EDC3-212ENST00000566828 POLKQ9UBT6 870 aa22.39■■□□□ 1.17
EDC3-212ENST00000566828 RTCBQ9Y3I0 505 aaKnown RBP22.39■■□□□ 1.17
EDC3-212ENST00000566828 A0A0G2JLW4 131 aa22.38■■□□□ 1.17
EDC3-212ENST00000566828 EIF4A2Q14240 407 aaKnown RBP22.38■■□□□ 1.17
EDC3-212ENST00000566828 SLC4A9Q96Q91 983 aa22.38■■□□□ 1.17
EDC3-212ENST00000566828 KDM6AO15550 1401 aaPredicted RBP22.38■■□□□ 1.17
EDC3-212ENST00000566828 RBM42Q9BTD8 480 aaKnown RBP22.37■■□□□ 1.17
EDC3-212ENST00000566828 PLEKHG2Q9H7P9 1386 aa22.37■■□□□ 1.17
EDC3-212ENST00000566828 TNNT2P45379 298 aaPredicted RBP22.36■■□□□ 1.17
EDC3-212ENST00000566828 TGFB2P61812 414 aa22.36■■□□□ 1.17
EDC3-212ENST00000566828 TRAPPC3LQ5T215 181 aa22.36■■□□□ 1.17
EDC3-212ENST00000566828 CNTNAP4Q9C0A0 1308 aa22.35■■□□□ 1.17
EDC3-212ENST00000566828 DPEP1P16444 411 aa22.34■■□□□ 1.17
EDC3-212ENST00000566828 APLP1P51693 650 aa22.34■■□□□ 1.17
EDC3-212ENST00000566828 NLGN1Q8N2Q7 840 aa22.34■■□□□ 1.17
EDC3-212ENST00000566828 ARHGEF1Q92888 912 aaKnown RBP22.34■■□□□ 1.17
EDC3-212ENST00000566828 CCDC87Q9NVE4 849 aa22.34■■□□□ 1.17
EDC3-212ENST00000566828 GYS1P13807 737 aa22.33■■□□□ 1.17
EDC3-212ENST00000566828 ARHGAP27Q6ZUM4 889 aa22.33■■□□□ 1.17
EDC3-212ENST00000566828 NMRK2Q9NPI5 230 aa22.33■■□□□ 1.17
EDC3-212ENST00000566828 VIRMAQ69YN4 1812 aaKnown RBP22.33■■□□□ 1.16
EDC3-212ENST00000566828 TNRC6CQ9HCJ0 1690 aaKnown RBP22.33■■□□□ 1.16
EDC3-212ENST00000566828 SCN11AQ9UI33 1791 aa22.33■■□□□ 1.16
EDC3-212ENST00000566828 FCHSD2O94868 740 aa22.32■■□□□ 1.16
EDC3-212ENST00000566828 ADRA2BP18089 450 aa22.32■■□□□ 1.16
EDC3-212ENST00000566828 POLR3GLQ9BT43 218 aa22.32■■□□□ 1.16
EDC3-212ENST00000566828 ADAMTS7Q9UKP4 1686 aa22.32■■□□□ 1.16
EDC3-212ENST00000566828 ERVV-2B6SEH9 535 aa22.31■■□□□ 1.16
EDC3-212ENST00000566828 TOMM70O94826 608 aa22.31■■□□□ 1.16
EDC3-212ENST00000566828 RFC4P35249 363 aa22.31■■□□□ 1.16
EDC3-212ENST00000566828 PARP3Q9Y6F1 533 aa22.31■■□□□ 1.16
EDC3-212ENST00000566828 SBF1O95248 1867 aa22.3■■□□□ 1.16
EDC3-212ENST00000566828 RC3H1Q5TC82 1133 aaKnown RBP22.3■■□□□ 1.16
EDC3-212ENST00000566828 DCAF5Q96JK2 942 aa22.3■■□□□ 1.16
EDC3-212ENST00000566828 RPS6KA4O75676 772 aa22.29■■□□□ 1.16
EDC3-212ENST00000566828 ZNF530Q6P9A1 599 aaPredicted RBP22.29■■□□□ 1.16
EDC3-212ENST00000566828 KCPQ6ZWJ8 1503 aa22.29■■□□□ 1.16
EDC3-212ENST00000566828 HSP90AB1P08238 724 aaKnown RBP22.28■■□□□ 1.16
EDC3-212ENST00000566828 CABP4P57796 275 aa22.27■■□□□ 1.16
EDC3-212ENST00000566828 DLEC1Q9Y238 1755 aa22.27■■□□□ 1.16
EDC3-212ENST00000566828 AFDNP55196 1824 aaKnown RBP22.27■■□□□ 1.15
EDC3-212ENST00000566828 C9orf131Q5VYM1 1079 aa22.26■■□□□ 1.15
EDC3-212ENST00000566828 SRP68Q9UHB9 627 aaKnown RBP22.26■■□□□ 1.15
EDC3-212ENST00000566828 PTCD1O75127 700 aaKnown RBP22.25■■□□□ 1.15
EDC3-212ENST00000566828 KCNA3P22001 575 aa22.25■■□□□ 1.15
EDC3-212ENST00000566828 PLEKHO1Q53GL0 409 aaPredicted RBP22.25■■□□□ 1.15
EDC3-212ENST00000566828 DNAJC5GQ8N7S2 189 aa22.25■■□□□ 1.15
EDC3-212ENST00000566828 TIAM2Q8IVF5 1701 aa22.25■■□□□ 1.15
EDC3-212ENST00000566828 CRKLP46109 303 aaKnown RBP22.24■■□□□ 1.15
EDC3-212ENST00000566828 AEBP1Q8IUX7 1158 aa22.24■■□□□ 1.15
EDC3-212ENST00000566828 USP42Q9H9J4 1324 aaKnown RBP22.24■■□□□ 1.15
EDC3-212ENST00000566828 DDR1Q08345 913 aa22.23■■□□□ 1.15
EDC3-212ENST00000566828 HTRA3P83110 453 aa22.22■■□□□ 1.15
EDC3-212ENST00000566828 FKBP8Q14318 412 aa22.22■■□□□ 1.15
EDC3-212ENST00000566828 C16orf71Q8IYS4 520 aaPredicted RBP22.22■■□□□ 1.15
EDC3-212ENST00000566828 RBM46Q8TBY0 533 aaKnown RBP22.22■■□□□ 1.15
EDC3-212ENST00000566828 PIM2Q9P1W9 311 aa22.22■■□□□ 1.15
EDC3-212ENST00000566828 NRXN2Q9P2S2 1712 aa22.21■■□□□ 1.15
EDC3-212ENST00000566828 MTHFSP49914 203 aa22.21■■□□□ 1.15
EDC3-212ENST00000566828 AMOTQ4VCS5 1084 aa22.21■■□□□ 1.15
EDC3-212ENST00000566828 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
EDC3-212ENST00000566828 RNF181Q9P0P0 153 aa22.21■■□□□ 1.15
EDC3-212ENST00000566828 DALRD3Q5D0E6 543 aaKnown RBP22.2■■□□□ 1.14
EDC3-212ENST00000566828 CHRNA5P30532 468 aa22.19■■□□□ 1.14
EDC3-212ENST00000566828 CCDC88AQ3V6T2 1871 aa22.19■■□□□ 1.14
EDC3-212ENST00000566828 MRC1P22897 1456 aa22.18■■□□□ 1.14
EDC3-212ENST00000566828 KDM2BQ8NHM5 1336 aa22.18■■□□□ 1.14
EDC3-212ENST00000566828 NFATC2IPQ8NCF5 419 aa22.18■■□□□ 1.14
EDC3-212ENST00000566828 POLRMTO00411 1230 aaKnown RBP22.16■■□□□ 1.14
EDC3-212ENST00000566828 UBR2Q8IWV8 1755 aa22.15■■□□□ 1.14
EDC3-212ENST00000566828 SULT6B1Q6IMI4 303 aa22.15■■□□□ 1.14
EDC3-212ENST00000566828 KLRG1Q96E93 195 aa22.15■■□□□ 1.14
EDC3-212ENST00000566828 PANK3Q9H999 370 aa22.15■■□□□ 1.14
EDC3-212ENST00000566828 RASSF7Q02833 373 aa22.14■■□□□ 1.13
EDC3-212ENST00000566828 FSTL1Q12841 308 aa22.14■■□□□ 1.13
EDC3-212ENST00000566828 INTS5Q6P9B9 1019 aaKnown RBP22.14■■□□□ 1.13
EDC3-212ENST00000566828 USPL1Q5W0Q7 1092 aa22.13■■□□□ 1.13
EDC3-212ENST00000566828 DNAJC10Q8IXB1 793 aa22.13■■□□□ 1.13
EDC3-212ENST00000566828 RRAGCQ9HB90 399 aa22.13■■□□□ 1.13
EDC3-212ENST00000566828 SOS1Q07889 1333 aaPredicted RBP22.12■■□□□ 1.13
EDC3-212ENST00000566828 MORC1Q86VD1 984 aa22.12■■□□□ 1.13
EDC3-212ENST00000566828 COL15A1P39059 1388 aa22.12■■□□□ 1.13
EDC3-212ENST00000566828 SCN7AQ01118 1682 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms