RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 LINC00116Q8NCU8 138 aa37.69■■■■□ 3.62
UBFD1-206ENST00000566669 C1orf141Q5JVX7 400 aa37.68■■■■□ 3.62
UBFD1-206ENST00000566669 AMER1Q5JTC6 1135 aaPredicted RBP37.67■■■■□ 3.62
UBFD1-206ENST00000566669 UBR3Q6ZT12 1888 aa37.67■■■■□ 3.62
UBFD1-206ENST00000566669 PHF14O94880 888 aa37.66■■■■□ 3.62
UBFD1-206ENST00000566669 KDRP35968 1356 aa37.66■■■■□ 3.62
UBFD1-206ENST00000566669 KIF7Q2M1P5 1343 aa37.65■■■■□ 3.62
UBFD1-206ENST00000566669 GNPATO15228 680 aa37.64■■■■□ 3.62
UBFD1-206ENST00000566669 CABP4P57796 275 aa37.64■■■■□ 3.62
UBFD1-206ENST00000566669 ITPK1Q13572 414 aa37.64■■■■□ 3.62
UBFD1-206ENST00000566669 ZNF831Q5JPB2 1677 aa37.63■■■■□ 3.62
UBFD1-206ENST00000566669 MTHFSP49914 203 aa37.63■■■■□ 3.61
UBFD1-206ENST00000566669 IL13P35225 146 aa37.62■■■■□ 3.61
UBFD1-206ENST00000566669 SULT6B1Q6IMI4 303 aa37.62■■■■□ 3.61
UBFD1-206ENST00000566669 RC3H1Q5TC82 1133 aaKnown RBP37.61■■■■□ 3.61
UBFD1-206ENST00000566669 GOLGB1Q14789 3259 aaKnown RBP37.6■■■■□ 3.61
UBFD1-206ENST00000566669 ADRA2BP18089 450 aa37.6■■■■□ 3.61
UBFD1-206ENST00000566669 AMIGO3Q86WK7 504 aa37.6■■■■□ 3.61
UBFD1-206ENST00000566669 RTCBQ9Y3I0 505 aaKnown RBP37.6■■■■□ 3.61
UBFD1-206ENST00000566669 AEBP1Q8IUX7 1158 aa37.58■■■■□ 3.61
UBFD1-206ENST00000566669 KDM6AO15550 1401 aaPredicted RBP37.58■■■■□ 3.61
UBFD1-206ENST00000566669 RBM42Q9BTD8 480 aaKnown RBP37.57■■■■□ 3.6
UBFD1-206ENST00000566669 TRAPPC3LQ5T215 181 aa37.56■■■■□ 3.6
UBFD1-206ENST00000566669 CNTNAP4Q9C0A0 1308 aa37.56■■■■□ 3.6
UBFD1-206ENST00000566669 YBX3P16989 372 aaKnown RBP eCLIP37.54■■■■□ 3.6
UBFD1-206ENST00000566669 NLGN1Q8N2Q7 840 aa37.53■■■■□ 3.6
UBFD1-206ENST00000566669 PER1O15534 1290 aaPredicted RBP37.52■■■■□ 3.6
UBFD1-206ENST00000566669 AKAP4Q5JQC9 854 aa37.51■■■■□ 3.6
UBFD1-206ENST00000566669 NPC1L1Q9UHC9 1359 aa37.5■■■■□ 3.59
UBFD1-206ENST00000566669 NFATC2IPQ8NCF5 419 aa37.49■■■■□ 3.59
UBFD1-206ENST00000566669 SLC4A9Q96Q91 983 aa37.49■■■■□ 3.59
UBFD1-206ENST00000566669 RPS6KA4O75676 772 aa37.48■■■■□ 3.59
UBFD1-206ENST00000566669 SMIM5Q71RC9 77 aa37.47■■■■□ 3.59
UBFD1-206ENST00000566669 RFC4P35249 363 aa37.45■■■■□ 3.59
UBFD1-206ENST00000566669 DIAPH1O60610 1272 aaKnown RBP37.44■■■■□ 3.58
UBFD1-206ENST00000566669 MMP10P09238 476 aa37.44■■■■□ 3.58
UBFD1-206ENST00000566669 COL5A3P25940 1745 aaPredicted RBP37.42■■■■□ 3.58
UBFD1-206ENST00000566669 PTCD1O75127 700 aaKnown RBP37.42■■■■□ 3.58
UBFD1-206ENST00000566669 ARHGEF1Q92888 912 aaKnown RBP37.42■■■■□ 3.58
UBFD1-206ENST00000566669 C1QTNF8P60827 252 aa37.4■■■■□ 3.58
UBFD1-206ENST00000566669 CC2D1BQ5T0F9 858 aaKnown RBP37.4■■■■□ 3.58
UBFD1-206ENST00000566669 GIGYF1O75420 1035 aaPredicted RBP37.39■■■■□ 3.58
UBFD1-206ENST00000566669 SLC52A2Q9HAB3 445 aa37.39■■■■□ 3.58
UBFD1-206ENST00000566669 TGFB2P61812 414 aa37.38■■■■□ 3.57
UBFD1-206ENST00000566669 CICQ96RK0 1608 aaPredicted RBP37.37■■■■□ 3.57
UBFD1-206ENST00000566669 SCN11AQ9UI33 1791 aa37.37■■■■□ 3.57
UBFD1-206ENST00000566669 CRKLP46109 303 aaKnown RBP37.36■■■■□ 3.57
UBFD1-206ENST00000566669 CCDC87Q9NVE4 849 aa37.36■■■■□ 3.57
UBFD1-206ENST00000566669 HMOX1P09601 288 aa37.35■■■■□ 3.57
UBFD1-206ENST00000566669 GYS1P13807 737 aa37.35■■■■□ 3.57
UBFD1-206ENST00000566669 PARP3Q9Y6F1 533 aa37.33■■■■□ 3.57
UBFD1-206ENST00000566669 MRC1P22897 1456 aa37.33■■■■□ 3.57
UBFD1-206ENST00000566669 RNMTO43148 476 aaKnown RBP37.32■■■■□ 3.56
UBFD1-206ENST00000566669 C10orf71Q711Q0 1435 aa37.29■■■■□ 3.56
UBFD1-206ENST00000566669 LGR6Q9HBX8 967 aa37.29■■■■□ 3.56
UBFD1-206ENST00000566669 MTHFSDQ2M296 383 aaKnown RBP37.28■■■■□ 3.56
UBFD1-206ENST00000566669 KIF13BQ9NQT8 1826 aa37.28■■■■□ 3.56
UBFD1-206ENST00000566669 VSIG10Q8N0Z9 540 aa37.27■■■■□ 3.56
UBFD1-206ENST00000566669 USP42Q9H9J4 1324 aaKnown RBP37.27■■■■□ 3.56
UBFD1-206ENST00000566669 PXDNLA1KZ92 1463 aa37.26■■■■□ 3.56
UBFD1-206ENST00000566669 MYH14Q7Z406 1995 aaKnown RBP37.26■■■■□ 3.56
UBFD1-206ENST00000566669 ATP10DQ9P241 1426 aa37.26■■■■□ 3.55
UBFD1-206ENST00000566669 C4AP0C0L4 1744 aa37.25■■■■□ 3.55
UBFD1-206ENST00000566669 GAS2L2Q8NHY3 880 aa37.24■■■■□ 3.55
UBFD1-206ENST00000566669 ADCY9O60503 1353 aa37.24■■■■□ 3.55
UBFD1-206ENST00000566669 TJP1Q07157 1748 aa37.24■■■■□ 3.55
UBFD1-206ENST00000566669 INTS5Q6P9B9 1019 aaKnown RBP37.23■■■■□ 3.55
UBFD1-206ENST00000566669 CFAP53Q96M91 514 aa37.23■■■■□ 3.55
UBFD1-206ENST00000566669 ADAMTS7Q9UKP4 1686 aa37.22■■■■□ 3.55
UBFD1-206ENST00000566669 GPBP1L1Q9HC44 474 aaPredicted RBP37.22■■■■□ 3.55
UBFD1-206ENST00000566669 COL3A1P02461 1466 aaPredicted RBP37.21■■■■□ 3.55
UBFD1-206ENST00000566669 U2SURPO15042 1029 aaKnown RBP37.21■■■■□ 3.55
UBFD1-206ENST00000566669 ZPR1O75312 459 aa37.21■■■■□ 3.55
UBFD1-206ENST00000566669 DNAJC10Q8IXB1 793 aa37.21■■■■□ 3.55
UBFD1-206ENST00000566669 SENP3-EIF4A1A0A087X0R7 540 aa37.2■■■■□ 3.55
UBFD1-206ENST00000566669 CYP19A1P11511 503 aaPredicted RBP37.19■■■■□ 3.54
UBFD1-206ENST00000566669 TTC5Q8N0Z6 440 aa37.18■■■■□ 3.54
UBFD1-206ENST00000566669 SOS1Q07889 1333 aaPredicted RBP37.17■■■■□ 3.54
UBFD1-206ENST00000566669 GNAT3A8MTJ3 354 aa37.17■■■■□ 3.54
UBFD1-206ENST00000566669 A0A0G2JLW4 131 aa37.16■■■■□ 3.54
UBFD1-206ENST00000566669 SLC39A6Q13433 755 aa37.16■■■■□ 3.54
UBFD1-206ENST00000566669 BCS1LQ9Y276 419 aa37.16■■■■□ 3.54
UBFD1-206ENST00000566669 TEFQ10587 303 aa37.15■■■■□ 3.54
UBFD1-206ENST00000566669 FKBP8Q14318 412 aa37.15■■■■□ 3.54
UBFD1-206ENST00000566669 SRP68Q9UHB9 627 aaKnown RBP37.15■■■■□ 3.54
UBFD1-206ENST00000566669 WWC3Q9ULE0 1092 aa37.15■■■■□ 3.54
UBFD1-206ENST00000566669 NUDCQ9Y266 331 aa37.15■■■■□ 3.54
UBFD1-206ENST00000566669 KCPQ6ZWJ8 1503 aa37.15■■■■□ 3.54
UBFD1-206ENST00000566669 STARD3NLO95772 234 aa37.13■■■■□ 3.53
UBFD1-206ENST00000566669 DPEP1P16444 411 aa37.13■■■■□ 3.53
UBFD1-206ENST00000566669 TEX13AQ9BXU3 409 aaPredicted RBP37.13■■■■□ 3.53
UBFD1-206ENST00000566669 NARFQ9UHQ1 456 aa37.12■■■■□ 3.53
UBFD1-206ENST00000566669 KIAA1551Q9HCM1 1747 aa37.12■■■■□ 3.53
UBFD1-206ENST00000566669 PIM2Q9P1W9 311 aa37.11■■■■□ 3.53
UBFD1-206ENST00000566669 COL15A1P39059 1388 aa37.1■■■■□ 3.53
UBFD1-206ENST00000566669 TM4SF1P30408 202 aa37.1■■■■□ 3.53
UBFD1-206ENST00000566669 FCHSD2O94868 740 aa37.09■■■■□ 3.53
UBFD1-206ENST00000566669 CNGB1Q14028 1251 aaPredicted RBP37.09■■■■□ 3.53
UBFD1-206ENST00000566669 USPL1Q5W0Q7 1092 aa37.09■■■■□ 3.53
UBFD1-206ENST00000566669 VIRMAQ69YN4 1812 aaKnown RBP37.08■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms