RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 ZBTB40Q9NUA8 1239 aa13.66□□□□□ -0.22
PDXDC1-214ENST00000566633 WDR17Q8IZU2 1322 aa13.66□□□□□ -0.22
PDXDC1-214ENST00000566633 COL18A1P39060 1754 aa13.65□□□□□ -0.22
PDXDC1-214ENST00000566633 RNMTO43148 476 aaKnown RBP13.65□□□□□ -0.22
PDXDC1-214ENST00000566633 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
PDXDC1-214ENST00000566633 SLC4A3P48751 1232 aa13.65□□□□□ -0.22
PDXDC1-214ENST00000566633 CRYBG1Q9Y4K1 1723 aa13.64□□□□□ -0.23
PDXDC1-214ENST00000566633 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
PDXDC1-214ENST00000566633 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
PDXDC1-214ENST00000566633 CYP27B1O15528 508 aa13.64□□□□□ -0.23
PDXDC1-214ENST00000566633 RTL5Q5HYW3 569 aaPredicted RBP13.64□□□□□ -0.23
PDXDC1-214ENST00000566633 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
PDXDC1-214ENST00000566633 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
PDXDC1-214ENST00000566633 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
PDXDC1-214ENST00000566633 PHKG2P15735 406 aa13.63□□□□□ -0.23
PDXDC1-214ENST00000566633 DEKP35659 375 aaKnown RBP13.63□□□□□ -0.23
PDXDC1-214ENST00000566633 ARHGAP45Q92619 1136 aa13.63□□□□□ -0.23
PDXDC1-214ENST00000566633 DAXXQ9UER7 740 aaPredicted RBP13.63□□□□□ -0.23
PDXDC1-214ENST00000566633 SPG7Q9UQ90 795 aa13.63□□□□□ -0.23
PDXDC1-214ENST00000566633 SLC39A6Q13433 755 aa13.62□□□□□ -0.23
PDXDC1-214ENST00000566633 DDX54Q8TDD1 881 aaKnown RBP13.62□□□□□ -0.23
PDXDC1-214ENST00000566633 EIF2S2P20042 333 aaKnown RBP13.62□□□□□ -0.23
PDXDC1-214ENST00000566633 SMC5Q8IY18 1101 aa13.62□□□□□ -0.23
PDXDC1-214ENST00000566633 NFATC2IPQ8NCF5 419 aa13.62□□□□□ -0.23
PDXDC1-214ENST00000566633 G2E3Q7L622 706 aa13.61□□□□□ -0.23
PDXDC1-214ENST00000566633 PRAMEF22A3QJZ6 481 aa13.61□□□□□ -0.23
PDXDC1-214ENST00000566633 IFNL2Q8IZJ0 200 aa13.61□□□□□ -0.23
PDXDC1-214ENST00000566633 CARD10Q9BWT7 1032 aa13.6□□□□□ -0.23
PDXDC1-214ENST00000566633 EIF4A1P60842 406 aaKnown RBP13.6□□□□□ -0.23
PDXDC1-214ENST00000566633 IL2RBP14784 551 aa13.59□□□□□ -0.23
PDXDC1-214ENST00000566633 ZCRB1Q8TBF4 217 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-214ENST00000566633 ZBTB7BO15156 539 aaPredicted RBP13.59□□□□□ -0.23
PDXDC1-214ENST00000566633 ANXA1P04083 346 aa13.58□□□□□ -0.24
PDXDC1-214ENST00000566633 FAM208AQ9UK61 1670 aaKnown RBP13.58□□□□□ -0.24
PDXDC1-214ENST00000566633 F6X3S4 739 aa13.58□□□□□ -0.24
PDXDC1-214ENST00000566633 LMO7Q8WWI1 1683 aa13.58□□□□□ -0.24
PDXDC1-214ENST00000566633 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
PDXDC1-214ENST00000566633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.241e-10■■□□□ 11.4
PDXDC1-214ENST00000566633 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
PDXDC1-214ENST00000566633 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
PDXDC1-214ENST00000566633 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
PDXDC1-214ENST00000566633 CHMP4BQ9H444 224 aaKnown RBP13.57□□□□□ -0.24
PDXDC1-214ENST00000566633 C1orf115Q9H7X2 142 aa13.57□□□□□ -0.24
PDXDC1-214ENST00000566633 SLC52A2Q9HAB3 445 aa13.57□□□□□ -0.24
PDXDC1-214ENST00000566633 ABCA3Q99758 1704 aa13.56□□□□□ -0.24
PDXDC1-214ENST00000566633 ABCC4O15439 1325 aa13.56□□□□□ -0.24
PDXDC1-214ENST00000566633 NUCB1Q02818 461 aa13.56□□□□□ -0.24
PDXDC1-214ENST00000566633 SLC4A10Q6U841 1118 aa13.56□□□□□ -0.24
PDXDC1-214ENST00000566633 TBC1D32Q96NH3 1257 aa13.56□□□□□ -0.24
PDXDC1-214ENST00000566633 STK31Q9BXU1 1019 aa13.56□□□□□ -0.24
PDXDC1-214ENST00000566633 PHAXQ9H814 394 aaKnown RBP13.56□□□□□ -0.24
PDXDC1-214ENST00000566633 CCDC30Q5VVM6 783 aa13.55□□□□□ -0.24
PDXDC1-214ENST00000566633 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
PDXDC1-214ENST00000566633 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
PDXDC1-214ENST00000566633 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
PDXDC1-214ENST00000566633 CABP4P57796 275 aa13.55□□□□□ -0.24
PDXDC1-214ENST00000566633 BABAM1Q9NWV8 329 aa13.55□□□□□ -0.24
PDXDC1-214ENST00000566633 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
PDXDC1-214ENST00000566633 ZNF790Q6PG37 636 aa13.54□□□□□ -0.24
PDXDC1-214ENST00000566633 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-214ENST00000566633 LRRC37A3O60309 1634 aa13.54□□□□□ -0.24
PDXDC1-214ENST00000566633 C8orf37Q96NL8 207 aa13.54□□□□□ -0.24
PDXDC1-214ENST00000566633 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
PDXDC1-214ENST00000566633 CHPF2Q9P2E5 772 aa13.54□□□□□ -0.24
PDXDC1-214ENST00000566633 COL16A1Q07092 1604 aaPredicted RBP13.54□□□□□ -0.24
PDXDC1-214ENST00000566633 ABCC6O95255 1503 aa13.53□□□□□ -0.24
PDXDC1-214ENST00000566633 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-214ENST00000566633 NFKBIBQ15653 356 aa13.53□□□□□ -0.24
PDXDC1-214ENST00000566633 FLIIQ13045 1269 aa13.53□□□□□ -0.24
PDXDC1-214ENST00000566633 FKBP5Q13451 457 aaPredicted RBP13.53□□□□□ -0.24
PDXDC1-214ENST00000566633 PCDH11XQ9BZA7 1347 aa13.53□□□□□ -0.24
PDXDC1-214ENST00000566633 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
PDXDC1-214ENST00000566633 PIP4K2AP48426 406 aaPredicted RBP13.52□□□□□ -0.24
PDXDC1-214ENST00000566633 CHD1LQ86WJ1 897 aa13.52□□□□□ -0.24
PDXDC1-214ENST00000566633 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.24
PDXDC1-214ENST00000566633 BECN1Q14457 450 aa13.52□□□□□ -0.25
PDXDC1-214ENST00000566633 PROSER3Q2NL68 480 aa13.51□□□□□ -0.25
PDXDC1-214ENST00000566633 SIRT2Q8IXJ6 389 aa13.51□□□□□ -0.25
PDXDC1-214ENST00000566633 GCC1Q96CN9 775 aa13.51□□□□□ -0.25
PDXDC1-214ENST00000566633 HSP90AB1P08238 724 aaKnown RBP13.51□□□□□ -0.25
PDXDC1-214ENST00000566633 NGLY1Q96IV0 654 aa13.51□□□□□ -0.25
PDXDC1-214ENST00000566633 LNPKQ9C0E8 428 aa13.51□□□□□ -0.25
PDXDC1-214ENST00000566633 RGS12O14924 1447 aa13.5□□□□□ -0.25
PDXDC1-214ENST00000566633 TTC5Q8N0Z6 440 aa13.5□□□□□ -0.25
PDXDC1-214ENST00000566633 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
PDXDC1-214ENST00000566633 HSPA1LP34931 641 aa13.5□□□□□ -0.25
PDXDC1-214ENST00000566633 USP16Q9Y5T5 823 aa13.5□□□□□ -0.25
PDXDC1-214ENST00000566633 PTPRCP08575 1304 aa13.49□□□□□ -0.25
PDXDC1-214ENST00000566633 A0A0G2JS52 829 aa13.49□□□□□ -0.25
PDXDC1-214ENST00000566633 INTS3Q68E01 1043 aaKnown RBP13.49□□□□□ -0.25
PDXDC1-214ENST00000566633 EXOC5O00471 708 aa13.48□□□□□ -0.25
PDXDC1-214ENST00000566633 AIMP1Q12904 312 aaKnown RBP13.48□□□□□ -0.25
PDXDC1-214ENST00000566633 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
PDXDC1-214ENST00000566633 SYTL4Q96C24 671 aaPredicted RBP13.48□□□□□ -0.25
PDXDC1-214ENST00000566633 MEIS3Q99687 375 aa13.48□□□□□ -0.25
PDXDC1-214ENST00000566633 MYL6BP14649 208 aa13.48□□□□□ -0.25
PDXDC1-214ENST00000566633 COL22A1Q8NFW1 1626 aaPredicted RBP13.47□□□□□ -0.25
PDXDC1-214ENST00000566633 C22orf23Q9BZE7 217 aa13.47□□□□□ -0.25
PDXDC1-214ENST00000566633 SPATA31A1Q5TZJ5 1347 aa13.47□□□□□ -0.25
PDXDC1-214ENST00000566633 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms