RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
KLHDC4-216ENST00000566561 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
KLHDC4-216ENST00000566561 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
KLHDC4-216ENST00000566561 ITGB4P16144 1822 aa16.73■□□□□ 0.27
KLHDC4-216ENST00000566561 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
KLHDC4-216ENST00000566561 ASAP1Q9ULH1 1129 aa16.73■□□□□ 0.27
KLHDC4-216ENST00000566561 NPC1L1Q9UHC9 1359 aa16.73■□□□□ 0.27
KLHDC4-216ENST00000566561 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
KLHDC4-216ENST00000566561 ERVV-2B6SEH9 535 aa16.72■□□□□ 0.27
KLHDC4-216ENST00000566561 HMOX1P09601 288 aa16.72■□□□□ 0.27
KLHDC4-216ENST00000566561 SIK1P57059 783 aa16.72■□□□□ 0.27
KLHDC4-216ENST00000566561 CABP4P57796 275 aa16.72■□□□□ 0.27
KLHDC4-216ENST00000566561 AK7Q96M32 723 aa16.72■□□□□ 0.27
KLHDC4-216ENST00000566561 C4BP0C0L5 1744 aa16.72■□□□□ 0.27
KLHDC4-216ENST00000566561 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.27
KLHDC4-216ENST00000566561 MSL1Q68DK7 614 aa16.71■□□□□ 0.27
KLHDC4-216ENST00000566561 COL23A1Q86Y22 540 aaPredicted RBP16.71■□□□□ 0.27
KLHDC4-216ENST00000566561 KDRP35968 1356 aa16.71■□□□□ 0.27
KLHDC4-216ENST00000566561 ATP6V1AP38606 617 aa16.7■□□□□ 0.26
KLHDC4-216ENST00000566561 FLAD1Q8NFF5 587 aa16.7■□□□□ 0.26
KLHDC4-216ENST00000566561 GPBP1L1Q9HC44 474 aaPredicted RBP16.7■□□□□ 0.26
KLHDC4-216ENST00000566561 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
KLHDC4-216ENST00000566561 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
KLHDC4-216ENST00000566561 CD2APQ9Y5K6 639 aa16.69■□□□□ 0.26
KLHDC4-216ENST00000566561 ADCY9O60503 1353 aa16.68■□□□□ 0.26
KLHDC4-216ENST00000566561 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
KLHDC4-216ENST00000566561 PHF14O94880 888 aa16.68■□□□□ 0.26
KLHDC4-216ENST00000566561 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
KLHDC4-216ENST00000566561 KDM6AO15550 1401 aaPredicted RBP16.68■□□□□ 0.26
KLHDC4-216ENST00000566561 AKAP4Q5JQC9 854 aa16.67■□□□□ 0.26
KLHDC4-216ENST00000566561 ITPK1Q13572 414 aa16.66■□□□□ 0.26
KLHDC4-216ENST00000566561 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
KLHDC4-216ENST00000566561 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
KLHDC4-216ENST00000566561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
KLHDC4-216ENST00000566561 GNPATO15228 680 aa16.65■□□□□ 0.26
KLHDC4-216ENST00000566561 SMIM5Q71RC9 77 aa16.65■□□□□ 0.26
KLHDC4-216ENST00000566561 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
KLHDC4-216ENST00000566561 HSPA6P17066 643 aa16.63■□□□□ 0.25
KLHDC4-216ENST00000566561 SSFA2P28290 1259 aa16.63■□□□□ 0.25
KLHDC4-216ENST00000566561 MTHFSDQ2M296 383 aaKnown RBP16.63■□□□□ 0.25
KLHDC4-216ENST00000566561 AMIGO3Q86WK7 504 aa16.63■□□□□ 0.25
KLHDC4-216ENST00000566561 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
KLHDC4-216ENST00000566561 ZNF526Q8TF50 670 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-216ENST00000566561 SLC4A9Q96Q91 983 aa16.62■□□□□ 0.25
KLHDC4-216ENST00000566561 LGR6Q9HBX8 967 aa16.62■□□□□ 0.25
KLHDC4-216ENST00000566561 PPP2R1AP30153 589 aa16.61■□□□□ 0.25
KLHDC4-216ENST00000566561 RTCBQ9Y3I0 505 aaKnown RBP16.61■□□□□ 0.25
KLHDC4-216ENST00000566561 KIF13BQ9NQT8 1826 aa16.61■□□□□ 0.25
KLHDC4-216ENST00000566561 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
KLHDC4-216ENST00000566561 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
KLHDC4-216ENST00000566561 SLC52A2Q9HAB3 445 aa16.6■□□□□ 0.25
KLHDC4-216ENST00000566561 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
KLHDC4-216ENST00000566561 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.24
KLHDC4-216ENST00000566561 RC3H1Q5TC82 1133 aaKnown RBP16.58■□□□□ 0.24
KLHDC4-216ENST00000566561 N4BP2Q86UW6 1770 aaPredicted RBP16.57■□□□□ 0.24
KLHDC4-216ENST00000566561 CNTNAP4Q9C0A0 1308 aa16.57■□□□□ 0.24
KLHDC4-216ENST00000566561 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
KLHDC4-216ENST00000566561 RPS6KA4O75676 772 aa16.56■□□□□ 0.24
KLHDC4-216ENST00000566561 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
KLHDC4-216ENST00000566561 PRKAR2BP31323 418 aa16.56■□□□□ 0.24
KLHDC4-216ENST00000566561 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
KLHDC4-216ENST00000566561 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
KLHDC4-216ENST00000566561 KIAA1551Q9HCM1 1747 aa16.56■□□□□ 0.24
KLHDC4-216ENST00000566561 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
KLHDC4-216ENST00000566561 RFC4P35249 363 aa16.55■□□□□ 0.24
KLHDC4-216ENST00000566561 CRKLP46109 303 aaKnown RBP16.55■□□□□ 0.24
KLHDC4-216ENST00000566561 SLC39A6Q13433 755 aa16.55■□□□□ 0.24
KLHDC4-216ENST00000566561 ARHGEF1Q92888 912 aaKnown RBP16.55■□□□□ 0.24
KLHDC4-216ENST00000566561 ADRA2BP18089 450 aa16.54■□□□□ 0.24
KLHDC4-216ENST00000566561 TEFQ10587 303 aa16.54■□□□□ 0.24
KLHDC4-216ENST00000566561 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
KLHDC4-216ENST00000566561 BRCA1P38398 1863 aaKnown RBP16.54■□□□□ 0.24
KLHDC4-216ENST00000566561 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
KLHDC4-216ENST00000566561 DNAJC10Q8IXB1 793 aa16.52■□□□□ 0.24
KLHDC4-216ENST00000566561 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.24
KLHDC4-216ENST00000566561 NLGN1Q8N2Q7 840 aa16.52■□□□□ 0.24
KLHDC4-216ENST00000566561 IL17REQ8NFR9 667 aa16.52■□□□□ 0.24
KLHDC4-216ENST00000566561 PXDNLA1KZ92 1463 aa16.52■□□□□ 0.23
KLHDC4-216ENST00000566561 MRC1P22897 1456 aa16.52■□□□□ 0.23
KLHDC4-216ENST00000566561 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.23
KLHDC4-216ENST00000566561 ARFGEF1Q9Y6D6 1849 aa16.52■□□□□ 0.23
KLHDC4-216ENST00000566561 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
KLHDC4-216ENST00000566561 COL5A3P25940 1745 aaPredicted RBP16.51■□□□□ 0.23
KLHDC4-216ENST00000566561 WDR90Q96KV7 1748 aa16.51■□□□□ 0.23
KLHDC4-216ENST00000566561 KIF3CO14782 793 aa16.51■□□□□ 0.23
KLHDC4-216ENST00000566561 FCHSD2O94868 740 aa16.51■□□□□ 0.23
KLHDC4-216ENST00000566561 MMP10P09238 476 aa16.51■□□□□ 0.23
KLHDC4-216ENST00000566561 APLP1P51693 650 aa16.5■□□□□ 0.23
KLHDC4-216ENST00000566561 INTS5Q6P9B9 1019 aaKnown RBP16.5■□□□□ 0.23
KLHDC4-216ENST00000566561 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
KLHDC4-216ENST00000566561 C4AP0C0L4 1744 aa16.5■□□□□ 0.23
KLHDC4-216ENST00000566561 GYS1P13807 737 aa16.49■□□□□ 0.23
KLHDC4-216ENST00000566561 C10orf71Q711Q0 1435 aa16.48■□□□□ 0.23
KLHDC4-216ENST00000566561 NEFMP07197 916 aa16.48■□□□□ 0.23
KLHDC4-216ENST00000566561 CYP19A1P11511 503 aaPredicted RBP16.48■□□□□ 0.23
KLHDC4-216ENST00000566561 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
KLHDC4-216ENST00000566561 VSIG10Q8N0Z9 540 aa16.48■□□□□ 0.23
KLHDC4-216ENST00000566561 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
KLHDC4-216ENST00000566561 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
KLHDC4-216ENST00000566561 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms