RNA–Protein interactions for RNA: ENST00000566523.1

CCP110-208, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 818 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-208ENST00000566523 SLURP2P0DP57 97 aa12.79□□□□□ -0.36
CCP110-208ENST00000566523 C4orf17Q53FE4 359 aa12.79□□□□□ -0.36
CCP110-208ENST00000566523 TMEM214Q6NUQ4 689 aaKnown RBP12.79□□□□□ -0.36
CCP110-208ENST00000566523 PPARGC1BQ86YN6 1023 aaKnown RBP12.79□□□□□ -0.36
CCP110-208ENST00000566523 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
CCP110-208ENST00000566523 H7C1W4 665 aa12.78□□□□□ -0.36
CCP110-208ENST00000566523 PHKA2P46019 1235 aa12.78□□□□□ -0.36
CCP110-208ENST00000566523 TLR1Q15399 786 aa12.78□□□□□ -0.36
CCP110-208ENST00000566523 EML3Q32P44 896 aa12.78□□□□□ -0.36
CCP110-208ENST00000566523 GNASQ5JWF2 1037 aa12.78□□□□□ -0.36
CCP110-208ENST00000566523 FNBP4Q8N3X1 1017 aaPredicted RBP12.78□□□□□ -0.36
CCP110-208ENST00000566523 TMEM229AB2RXF0 380 aa12.77□□□□□ -0.37
CCP110-208ENST00000566523 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.37
CCP110-208ENST00000566523 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
CCP110-208ENST00000566523 RHBDD1Q8TEB9 315 aa12.76□□□□□ -0.37
CCP110-208ENST00000566523 NOD1Q9Y239 953 aa12.76□□□□□ -0.37
CCP110-208ENST00000566523 A0A1B0GTH6 734 aa12.75□□□□□ -0.37
CCP110-208ENST00000566523 THBS1P07996 1170 aa12.75□□□□□ -0.37
CCP110-208ENST00000566523 NCOA4Q13772 614 aa12.75□□□□□ -0.37
CCP110-208ENST00000566523 UCN2Q96RP3 112 aa12.75□□□□□ -0.37
CCP110-208ENST00000566523 USP17L5A8MUK1 530 aa12.74□□□□□ -0.37
CCP110-208ENST00000566523 GPR25O00155 361 aa12.74□□□□□ -0.37
CCP110-208ENST00000566523 SMTNP53814 917 aa12.74□□□□□ -0.37
CCP110-208ENST00000566523 GTPBP3Q969Y2 492 aaKnown RBP12.74□□□□□ -0.37
CCP110-208ENST00000566523 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
CCP110-208ENST00000566523 ZNF385CQ66K41 422 aaPredicted RBP12.73□□□□□ -0.37
CCP110-208ENST00000566523 FOXR1Q6PIV2 292 aa12.73□□□□□ -0.37
CCP110-208ENST00000566523 PROSER2Q86WR7 435 aaPredicted RBP12.73□□□□□ -0.37
CCP110-208ENST00000566523 NUCKS1Q9H1E3 243 aaKnown RBP12.73□□□□□ -0.37
CCP110-208ENST00000566523 GTF2IP78347 998 aa12.72□□□□□ -0.37
CCP110-208ENST00000566523 SRSF11Q05519 484 aaKnown RBP12.72□□□□□ -0.37
CCP110-208ENST00000566523 DEPDC4Q8N2C3 294 aa12.72□□□□□ -0.37
CCP110-208ENST00000566523 WHAMMQ8TF30 809 aa12.72□□□□□ -0.37
CCP110-208ENST00000566523 GPAMQ9HCL2 828 aa12.72□□□□□ -0.37
CCP110-208ENST00000566523 SERTAD1Q9UHV2 236 aa12.72□□□□□ -0.37
CCP110-208ENST00000566523 ADAMTS2O95450 1211 aa12.71□□□□□ -0.37
CCP110-208ENST00000566523 MTFR1Q15390 333 aa12.71□□□□□ -0.37
CCP110-208ENST00000566523 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
CCP110-208ENST00000566523 PLEKHM2Q8IWE5 1019 aa12.71□□□□□ -0.37
CCP110-208ENST00000566523 MSX1P28360 303 aa12.7□□□□□ -0.38
CCP110-208ENST00000566523 ZNF295-AS1Q8N0V1 137 aa12.7□□□□□ -0.38
CCP110-208ENST00000566523 MBIPQ9NS73 344 aa12.7□□□□□ -0.38
CCP110-208ENST00000566523 IQSEC3Q9UPP2 1182 aaPredicted RBP12.69□□□□□ -0.38
CCP110-208ENST00000566523 A6NJR5 290 aa12.68□□□□□ -0.38
CCP110-208ENST00000566523 A6NJY4 79 aa12.68□□□□□ -0.38
CCP110-208ENST00000566523 ATP9BO43861 1147 aa12.68□□□□□ -0.38
CCP110-208ENST00000566523 UBAP2LQ14157 1087 aaKnown RBP12.68□□□□□ -0.38
CCP110-208ENST00000566523 TRERF1Q96PN7 1200 aa12.68□□□□□ -0.38
CCP110-208ENST00000566523 USP17L3A6NCW0 530 aa12.67□□□□□ -0.38
CCP110-208ENST00000566523 USP17L4A6NCW7 530 aa12.67□□□□□ -0.38
CCP110-208ENST00000566523 CDK2AP1O14519 115 aa12.67□□□□□ -0.38
CCP110-208ENST00000566523 PLA2G4AP47712 749 aa12.67□□□□□ -0.38
CCP110-208ENST00000566523 USP17L2Q6R6M4 530 aa12.67□□□□□ -0.38
CCP110-208ENST00000566523 USP17L1Q7RTZ2 530 aa12.67□□□□□ -0.38
CCP110-208ENST00000566523 NIFKQ9BYG3 293 aaKnown RBP12.67□□□□□ -0.38
CCP110-208ENST00000566523 RUBCNLQ9H714 662 aa12.67□□□□□ -0.38
CCP110-208ENST00000566523 USP3Q9Y6I4 520 aa12.67□□□□□ -0.38
CCP110-208ENST00000566523 ARHGEF15O94989 841 aa12.66□□□□□ -0.38
CCP110-208ENST00000566523 LBRQ14739 615 aaKnown RBP12.66□□□□□ -0.38
CCP110-208ENST00000566523 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCP110-208ENST00000566523 GLMNQ92990 594 aa12.66□□□□□ -0.38
CCP110-208ENST00000566523 ZNF358Q9NW07 568 aa12.66□□□□□ -0.38
CCP110-208ENST00000566523 BACH1O14867 736 aa12.65□□□□□ -0.38
CCP110-208ENST00000566523 ZBTB7BO15156 539 aaPredicted RBP12.65□□□□□ -0.38
CCP110-208ENST00000566523 LYPD4Q6UWN0 246 aa12.65□□□□□ -0.38
CCP110-208ENST00000566523 SVOPQ8N4V2 548 aa12.65□□□□□ -0.38
CCP110-208ENST00000566523 CFHR5Q9BXR6 569 aa12.65□□□□□ -0.38
CCP110-208ENST00000566523 ADAMTS8Q9UP79 889 aa12.65□□□□□ -0.38
CCP110-208ENST00000566523 IGF1RP08069 1367 aa12.65□□□□□ -0.38
CCP110-208ENST00000566523 CSB-PGBD3P0DP91 1061 aa12.64□□□□□ -0.39
CCP110-208ENST00000566523 TRIM50Q86XT4 487 aa12.64□□□□□ -0.39
CCP110-208ENST00000566523 PGBD3Q8N328 593 aa12.64□□□□□ -0.39
CCP110-208ENST00000566523 CRISPLD1Q9H336 500 aa12.64□□□□□ -0.39
CCP110-208ENST00000566523 PSME1Q06323 249 aa12.63□□□□□ -0.39
CCP110-208ENST00000566523 ATP4AP20648 1035 aa12.62□□□□□ -0.39
CCP110-208ENST00000566523 CLDN10P78369 228 aa12.62□□□□□ -0.39
CCP110-208ENST00000566523 C1orf216Q8TAB5 229 aa12.62□□□□□ -0.39
CCP110-208ENST00000566523 SCHIP1Q9P0W5 487 aaPredicted RBP12.62□□□□□ -0.39
CCP110-208ENST00000566523 KIAA1024Q9UPX6 916 aa12.62□□□□□ -0.39
CCP110-208ENST00000566523 CELA2BP08218 269 aaPredicted RBP12.61□□□□□ -0.39
CCP110-208ENST00000566523 MX2P20592 715 aa12.61□□□□□ -0.39
CCP110-208ENST00000566523 EPHA4P54764 986 aa12.61□□□□□ -0.39
CCP110-208ENST00000566523 ATP1A2P50993 1020 aa12.6□□□□□ -0.39
CCP110-208ENST00000566523 FOXK2Q01167 660 aa12.6□□□□□ -0.39
CCP110-208ENST00000566523 EFHC2Q5JST6 749 aa12.6□□□□□ -0.39
CCP110-208ENST00000566523 NDFIP2Q9NV92 336 aa12.6□□□□□ -0.39
CCP110-208ENST00000566523 MKRN1Q9UHC7 482 aaKnown RBP12.6□□□□□ -0.39
CCP110-208ENST00000566523 AIDAQ96BJ3 306 aa12.59□□□□□ -0.39
CCP110-208ENST00000566523 DNAAF2Q9NVR5 837 aaKnown RBP12.59□□□□□ -0.39
CCP110-208ENST00000566523 TFIP11Q9UBB9 837 aaKnown RBP12.59□□□□□ -0.39
CCP110-208ENST00000566523 CCDC102BQ68D86 513 aa12.58□□□□□ -0.4
CCP110-208ENST00000566523 TPCN2Q8NHX9 752 aa12.58□□□□□ -0.4
CCP110-208ENST00000566523 CABP1Q9NZU7 370 aa12.58□□□□□ -0.4
CCP110-208ENST00000566523 PHF24Q9UPV7 400 aa12.58□□□□□ -0.4
CCP110-208ENST00000566523 KCNMA1Q12791 1236 aa12.57□□□□□ -0.4
CCP110-208ENST00000566523 LARGE2Q8N3Y3 721 aa12.57□□□□□ -0.4
CCP110-208ENST00000566523 OGFOD1Q8N543 542 aa12.57□□□□□ -0.4
CCP110-208ENST00000566523 ACDQ96AP0 544 aa12.57□□□□□ -0.4
CCP110-208ENST00000566523 ZDHHC3Q9NYG2 299 aa12.57□□□□□ -0.4
CCP110-208ENST00000566523 MAFBQ9Y5Q3 323 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms