RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 NOM1Q5C9Z4 860 aaKnown RBP8.37□□□□□ -1.07
CNOT1-209ENST00000566240 RC3H1Q5TC82 1133 aaKnown RBP8.37□□□□□ -1.07
CNOT1-209ENST00000566240 OSBPL3Q9H4L5 887 aa8.37□□□□□ -1.07
CNOT1-209ENST00000566240 TUT1Q9H6E5 874 aaKnown RBP8.37□□□□□ -1.07
CNOT1-209ENST00000566240 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
CNOT1-209ENST00000566240 BACH1O14867 736 aa8.36□□□□□ -1.07
CNOT1-209ENST00000566240 PTCD1O75127 700 aaKnown RBP8.36□□□□□ -1.07
CNOT1-209ENST00000566240 GRM5P41594 1212 aa8.36□□□□□ -1.07
CNOT1-209ENST00000566240 CAPN12Q6ZSI9 719 aa8.36□□□□□ -1.07
CNOT1-209ENST00000566240 GLYCTKQ8IVS8 523 aa8.36□□□□□ -1.07
CNOT1-209ENST00000566240 PURBQ96QR8 312 aaKnown RBP8.36□□□□□ -1.07
CNOT1-209ENST00000566240 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
CNOT1-209ENST00000566240 ST8SIA5O15466 376 aa8.35□□□□□ -1.07
CNOT1-209ENST00000566240 IGFBP4P22692 258 aa8.35□□□□□ -1.07
CNOT1-209ENST00000566240 FSHRP23945 695 aa8.35□□□□□ -1.07
CNOT1-209ENST00000566240 SCNN1DP51172 638 aa8.35□□□□□ -1.07
CNOT1-209ENST00000566240 GDF10P55107 478 aa8.35□□□□□ -1.07
CNOT1-209ENST00000566240 FKBP4Q02790 459 aaKnown RBP eCLIP8.35□□□□□ -1.07
CNOT1-209ENST00000566240 MPNDQ8N594 471 aa8.35□□□□□ -1.07
CNOT1-209ENST00000566240 GAS2L2Q8NHY3 880 aa8.35□□□□□ -1.07
CNOT1-209ENST00000566240 COL26A1Q96A83 441 aa8.35□□□□□ -1.07
CNOT1-209ENST00000566240 DNMT3AQ9Y6K1 912 aaPredicted RBP8.35□□□□□ -1.07
CNOT1-209ENST00000566240 UNCXA6NJT0 531 aa8.34□□□□□ -1.07
CNOT1-209ENST00000566240 WASLO00401 505 aaPredicted RBP8.34□□□□□ -1.07
CNOT1-209ENST00000566240 C21orf2O43822 256 aa8.34□□□□□ -1.07
CNOT1-209ENST00000566240 STAU1O95793 577 aaKnown RBP8.34□□□□□ -1.07
CNOT1-209ENST00000566240 SF3B2Q13435 895 aaKnown RBP8.34□□□□□ -1.07
CNOT1-209ENST00000566240 TNS4Q8IZW8 715 aa8.34□□□□□ -1.07
CNOT1-209ENST00000566240 SCG3Q8WXD2 468 aaKnown RBP8.34□□□□□ -1.07
CNOT1-209ENST00000566240 PKD2L1Q9P0L9 805 aa8.34□□□□□ -1.07
CNOT1-209ENST00000566240 ANKRD33BA6NCL7 494 aa8.33□□□□□ -1.08
CNOT1-209ENST00000566240 FOXO3O43524 673 aa8.33□□□□□ -1.08
CNOT1-209ENST00000566240 INHAP05111 366 aa8.33□□□□□ -1.08
CNOT1-209ENST00000566240 NAA30Q147X3 362 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-209ENST00000566240 ECM1Q16610 540 aa8.33□□□□□ -1.08
CNOT1-209ENST00000566240 ZNF784Q8NCA9 323 aaPredicted RBP8.33□□□□□ -1.08
CNOT1-209ENST00000566240 SERTAD1Q9UHV2 236 aa8.33□□□□□ -1.08
CNOT1-209ENST00000566240 SIAH2O43255 324 aa8.32□□□□□ -1.08
CNOT1-209ENST00000566240 FOXC1Q12948 553 aa8.32□□□□□ -1.08
CNOT1-209ENST00000566240 MTMR3Q13615 1198 aa8.32□□□□□ -1.08
CNOT1-209ENST00000566240 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
CNOT1-209ENST00000566240 BCL2L13Q9BXK5 485 aa8.32□□□□□ -1.08
CNOT1-209ENST00000566240 ETNK1Q9HBU6 452 aa8.32□□□□□ -1.08
CNOT1-209ENST00000566240 AAASQ9NRG9 546 aa8.32□□□□□ -1.08
CNOT1-209ENST00000566240 TLL2Q9Y6L7 1015 aa8.32□□□□□ -1.08
CNOT1-209ENST00000566240 ATAD2Q6PL18 1390 aa8.32□□□□□ -1.08
CNOT1-209ENST00000566240 LILRA1O75019 489 aa8.31□□□□□ -1.08
CNOT1-209ENST00000566240 ADH1CP00326 375 aa8.31□□□□□ -1.08
CNOT1-209ENST00000566240 NR5A1Q13285 461 aa8.31□□□□□ -1.08
CNOT1-209ENST00000566240 PPP1R26Q5T8A7 1209 aaPredicted RBP8.31□□□□□ -1.08
CNOT1-209ENST00000566240 SLC4A9Q96Q91 983 aa8.31□□□□□ -1.08
CNOT1-209ENST00000566240 GNRH1P01148 92 aa8.3□□□□□ -1.08
CNOT1-209ENST00000566240 ZNF16P17020 682 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-209ENST00000566240 MAPK1P28482 360 aa8.3□□□□□ -1.08
CNOT1-209ENST00000566240 EPHA4P54764 986 aa8.3□□□□□ -1.08
CNOT1-209ENST00000566240 ARHGAP4P98171 946 aa8.3□□□□□ -1.08
CNOT1-209ENST00000566240 CYP2U1Q7Z449 544 aa8.3□□□□□ -1.08
CNOT1-209ENST00000566240 NPAS4Q8IUM7 802 aa8.3□□□□□ -1.08
CNOT1-209ENST00000566240 HELQQ8TDG4 1101 aa8.3□□□□□ -1.08
CNOT1-209ENST00000566240 TSPAN10Q9H1Z9 355 aaPredicted RBP8.3□□□□□ -1.08
CNOT1-209ENST00000566240 DCTN4Q9UJW0 460 aa8.3□□□□□ -1.08
CNOT1-209ENST00000566240 ADD1P35611 737 aaKnown RBP8.29□□□□□ -1.08
CNOT1-209ENST00000566240 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
CNOT1-209ENST00000566240 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
CNOT1-209ENST00000566240 VTI1AQ96AJ9 217 aa8.29□□□□□ -1.08
CNOT1-209ENST00000566240 GIPC2Q8TF65 315 aa8.28□□□□□ -1.08
CNOT1-209ENST00000566240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.28□□□□□ -1.085e-7■■■■□ 23.2
CNOT1-209ENST00000566240 A0A1W2PRU2 124 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 WNT7AO00755 349 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 PPP1R12BO60237 982 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-209ENST00000566240 FAM13AO94988 1023 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 NR3C2P08235 984 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 NPR3P17342 541 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 SMTNP53814 917 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 FOXK2Q01167 660 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-209ENST00000566240 MRRFQ96E11 262 aaKnown RBP8.27□□□□□ -1.09
CNOT1-209ENST00000566240 MRGPRX2Q96LB1 330 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 ASB16Q96NS5 453 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
CNOT1-209ENST00000566240 SCHIP1Q9P0W5 487 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-209ENST00000566240 A6NJY4 79 aa8.26□□□□□ -1.09
CNOT1-209ENST00000566240 TBCELQ5QJ74 424 aa8.26□□□□□ -1.09
CNOT1-209ENST00000566240 RAB6BQ9NRW1 208 aa8.26□□□□□ -1.09
CNOT1-209ENST00000566240 TOR4AQ9NXH8 423 aa8.26□□□□□ -1.09
CNOT1-209ENST00000566240 KIAA1522Q9P206 1035 aaPredicted RBP8.26□□□□□ -1.09
CNOT1-209ENST00000566240 DACH1Q9UI36 760 aa8.26□□□□□ -1.09
CNOT1-209ENST00000566240 EMILIN1Q9Y6C2 1016 aa8.26□□□□□ -1.09
CNOT1-209ENST00000566240 MTFR1Q15390 333 aa8.25□□□□□ -1.09
CNOT1-209ENST00000566240 ZNF326Q5BKZ1 582 aaKnown RBP8.25□□□□□ -1.09
CNOT1-209ENST00000566240 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-209ENST00000566240 C16orf46Q6P387 395 aa8.25□□□□□ -1.09
CNOT1-209ENST00000566240 SLC9A9Q8IVB4 645 aa8.25□□□□□ -1.09
CNOT1-209ENST00000566240 CRIPAKQ8N1N5 446 aa8.25□□□□□ -1.09
CNOT1-209ENST00000566240 STAG2Q8N3U4 1231 aa8.25□□□□□ -1.09
CNOT1-209ENST00000566240 XAGE2Q96GT9 111 aa8.25□□□□□ -1.09
CNOT1-209ENST00000566240 SAP130Q9H0E3 1048 aa8.25□□□□□ -1.09
CNOT1-209ENST00000566240 ARHGEF10LQ9HCE6 1279 aa8.25□□□□□ -1.09
CNOT1-209ENST00000566240 TREML4Q6UXN2 200 aa8.24□□□□□ -1.09
CNOT1-209ENST00000566240 C2orf49Q9BVC5 232 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms