RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 PTPRTO14522 1441 aa13.78□□□□□ -0.2
UBFD1-205ENST00000566136 PIK3CDO00329 1044 aa13.78□□□□□ -0.2
UBFD1-205ENST00000566136 RTL5Q5HYW3 569 aaPredicted RBP13.78□□□□□ -0.2
UBFD1-205ENST00000566136 PPP2R2DQ66LE6 453 aa13.78□□□□□ -0.2
UBFD1-205ENST00000566136 MYO3AQ8NEV4 1616 aa13.77□□□□□ -0.2
UBFD1-205ENST00000566136 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
UBFD1-205ENST00000566136 SOX12O15370 315 aa13.77□□□□□ -0.21
UBFD1-205ENST00000566136 PPP1R18Q6NYC8 613 aa13.77□□□□□ -0.21
UBFD1-205ENST00000566136 FILIP1Q7Z7B0 1213 aa13.77□□□□□ -0.21
UBFD1-205ENST00000566136 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
UBFD1-205ENST00000566136 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
UBFD1-205ENST00000566136 MTMR3Q13615 1198 aa13.76□□□□□ -0.21
UBFD1-205ENST00000566136 NOVA2Q9UNW9 492 aaKnown RBP13.76□□□□□ -0.21
UBFD1-205ENST00000566136 NUP155O75694 1391 aa13.76□□□□□ -0.21
UBFD1-205ENST00000566136 SHANK2Q9UPX8 1470 aa13.76□□□□□ -0.21
UBFD1-205ENST00000566136 RHBDL3P58872 404 aa13.75□□□□□ -0.21
UBFD1-205ENST00000566136 PCDH12Q9NPG4 1184 aa13.75□□□□□ -0.21
UBFD1-205ENST00000566136 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
UBFD1-205ENST00000566136 ATP2B1P20020 1258 aa13.75□□□□□ -0.21
UBFD1-205ENST00000566136 ARID4AP29374 1257 aaPredicted RBP13.75□□□□□ -0.21
UBFD1-205ENST00000566136 CEP170BQ9Y4F5 1589 aaPredicted RBP13.75□□□□□ -0.21
UBFD1-205ENST00000566136 KDM5DQ9BY66 1539 aa13.75□□□□□ -0.21
UBFD1-205ENST00000566136 MAST1Q9Y2H9 1570 aa13.75□□□□□ -0.21
UBFD1-205ENST00000566136 ABL1P00519 1130 aa13.74□□□□□ -0.21
UBFD1-205ENST00000566136 CBLBQ13191 982 aa13.74□□□□□ -0.21
UBFD1-205ENST00000566136 CCDC181Q5TID7 509 aa13.74□□□□□ -0.21
UBFD1-205ENST00000566136 MAMSTRQ6ZN01 415 aa13.74□□□□□ -0.21
UBFD1-205ENST00000566136 KIF15Q9NS87 1388 aa13.74□□□□□ -0.21
UBFD1-205ENST00000566136 RBM10P98175 930 aaKnown RBP13.74□□□□□ -0.21
UBFD1-205ENST00000566136 ZNF710Q8N1W2 664 aa13.74□□□□□ -0.21
UBFD1-205ENST00000566136 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
UBFD1-205ENST00000566136 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
UBFD1-205ENST00000566136 CRTC2Q53ET0 693 aaPredicted RBP13.73□□□□□ -0.21
UBFD1-205ENST00000566136 DEPDC4Q8N2C3 294 aa13.73□□□□□ -0.21
UBFD1-205ENST00000566136 RPS6KC1Q96S38 1066 aa13.73□□□□□ -0.21
UBFD1-205ENST00000566136 MAF1Q9H063 256 aa13.73□□□□□ -0.21
UBFD1-205ENST00000566136 PCDHB15Q9Y5E8 787 aa13.73□□□□□ -0.21
UBFD1-205ENST00000566136 WDHD1O75717 1129 aaPredicted RBP13.73□□□□□ -0.21
UBFD1-205ENST00000566136 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
UBFD1-205ENST00000566136 TNRQ92752 1358 aa13.72□□□□□ -0.21
UBFD1-205ENST00000566136 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
UBFD1-205ENST00000566136 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
UBFD1-205ENST00000566136 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
UBFD1-205ENST00000566136 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
UBFD1-205ENST00000566136 TSR2Q969E8 191 aaKnown RBP13.72□□□□□ -0.21
UBFD1-205ENST00000566136 CUEDC1Q9NWM3 386 aaPredicted RBP13.72□□□□□ -0.21
UBFD1-205ENST00000566136 JDP2Q8WYK2 163 aa13.72□□□□□ -0.21
UBFD1-205ENST00000566136 GNL3LQ9NVN8 582 aaKnown RBP13.72□□□□□ -0.21
UBFD1-205ENST00000566136 A2ML1A8K2U0 1454 aa13.71□□□□□ -0.21
UBFD1-205ENST00000566136 H3BRB1 525 aa13.71□□□□□ -0.21
UBFD1-205ENST00000566136 TUT1Q9H6E5 874 aaKnown RBP13.71□□□□□ -0.21
UBFD1-205ENST00000566136 MRPL58Q14197 206 aaKnown RBP13.7□□□□□ -0.22
UBFD1-205ENST00000566136 CCDC184Q52MB2 194 aa13.7□□□□□ -0.22
UBFD1-205ENST00000566136 TRIM34Q9BYJ4 488 aa13.7□□□□□ -0.22
UBFD1-205ENST00000566136 PLA2R1Q13018 1463 aa13.7□□□□□ -0.22
UBFD1-205ENST00000566136 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
UBFD1-205ENST00000566136 LTBP4Q8N2S1 1624 aa13.7□□□□□ -0.22
UBFD1-205ENST00000566136 LGR5O75473 907 aa13.7□□□□□ -0.22
UBFD1-205ENST00000566136 MAPK1P28482 360 aa13.7□□□□□ -0.22
UBFD1-205ENST00000566136 UBA5Q9GZZ9 404 aa13.7□□□□□ -0.22
UBFD1-205ENST00000566136 GPHNQ9NQX3 736 aaPredicted RBP13.7□□□□□ -0.22
UBFD1-205ENST00000566136 RNF17Q9BXT8 1623 aaKnown RBP13.69□□□□□ -0.22
UBFD1-205ENST00000566136 SPATA31E1Q6ZUB1 1445 aa13.69□□□□□ -0.22
UBFD1-205ENST00000566136 BIRC2Q13490 618 aa13.69□□□□□ -0.22
UBFD1-205ENST00000566136 RIC3Q7Z5B4 369 aa13.69□□□□□ -0.22
UBFD1-205ENST00000566136 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
UBFD1-205ENST00000566136 IBSPP21815 317 aaPredicted RBP13.69□□□□□ -0.22
UBFD1-205ENST00000566136 ENOX2Q16206 610 aaKnown RBP13.69□□□□□ -0.22
UBFD1-205ENST00000566136 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
UBFD1-205ENST00000566136 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
UBFD1-205ENST00000566136 ZNF335Q9H4Z2 1342 aaPredicted RBP13.69□□□□□ -0.22
UBFD1-205ENST00000566136 ABCC3O15438 1527 aa13.68□□□□□ -0.22
UBFD1-205ENST00000566136 MCCP23508 829 aa13.68□□□□□ -0.22
UBFD1-205ENST00000566136 C4orf46Q504U0 113 aa13.68□□□□□ -0.22
UBFD1-205ENST00000566136 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
UBFD1-205ENST00000566136 B4GALNT3Q6L9W6 998 aa13.68□□□□□ -0.22
UBFD1-205ENST00000566136 DUOX2Q9NRD8 1548 aa13.67□□□□□ -0.22
UBFD1-205ENST00000566136 MROH1Q8NDA8 1641 aa13.67□□□□□ -0.22
UBFD1-205ENST00000566136 SCAMP3O14828 347 aaKnown RBP13.67□□□□□ -0.22
UBFD1-205ENST00000566136 NDUFB9Q9Y6M9 179 aa13.67□□□□□ -0.22
UBFD1-205ENST00000566136 EIF2AK4Q9P2K8 1649 aaKnown RBP13.67□□□□□ -0.22
UBFD1-205ENST00000566136 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
UBFD1-205ENST00000566136 TMC2Q8TDI7 906 aa13.66□□□□□ -0.22
UBFD1-205ENST00000566136 NPDC1Q9NQX5 325 aaPredicted RBP13.66□□□□□ -0.22
UBFD1-205ENST00000566136 S100BP04271 92 aaPredicted RBP13.66□□□□□ -0.22
UBFD1-205ENST00000566136 NDUFV2P19404 249 aa13.66□□□□□ -0.22
UBFD1-205ENST00000566136 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
UBFD1-205ENST00000566136 USP47Q96K76 1375 aa13.65□□□□□ -0.22
UBFD1-205ENST00000566136 BDNFP23560 247 aa13.65□□□□□ -0.22
UBFD1-205ENST00000566136 ZNF746Q6NUN9 644 aaPredicted RBP13.65□□□□□ -0.22
UBFD1-205ENST00000566136 TMEM87AQ8NBN3 555 aa13.65□□□□□ -0.22
UBFD1-205ENST00000566136 DDX56Q9NY93 547 aaKnown RBP13.65□□□□□ -0.22
UBFD1-205ENST00000566136 TTF2Q9UNY4 1162 aaKnown RBP13.65□□□□□ -0.22
UBFD1-205ENST00000566136 MAP9Q49MG5 647 aa13.65□□□□□ -0.22
UBFD1-205ENST00000566136 CEP152O94986 1710 aa13.64□□□□□ -0.23
UBFD1-205ENST00000566136 CNGB1Q14028 1251 aaPredicted RBP13.64□□□□□ -0.23
UBFD1-205ENST00000566136 PCDHGB7Q9Y5F8 929 aa13.64□□□□□ -0.23
UBFD1-205ENST00000566136 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
UBFD1-205ENST00000566136 PRKRIP1Q9H875 184 aaPredicted RBP13.64□□□□□ -0.23
UBFD1-205ENST00000566136 ZC3H13Q5T200 1668 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms