RNA–Protein interactions for RNA: ENST00000566101.1

LINC01477-201, Transcript of long intergenic non-protein coding RNA 1477, humanhuman

TSL 1 (best) BASIC

Gene LINC01477, Length 1,226 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01477-201ENST00000566101 SNRPBP14678 240 aaKnown RBP12.66□□□□□ -0.38
LINC01477-201ENST00000566101 VRTNQ9H8Y1 702 aa12.66□□□□□ -0.38
LINC01477-201ENST00000566101 RASA1P20936 1047 aa12.65□□□□□ -0.38
LINC01477-201ENST00000566101 DNAAF2Q9NVR5 837 aaKnown RBP12.65□□□□□ -0.38
LINC01477-201ENST00000566101 GDF10P55107 478 aa12.64□□□□□ -0.39
LINC01477-201ENST00000566101 PSME1Q06323 249 aa12.64□□□□□ -0.39
LINC01477-201ENST00000566101 CLN3Q13286 438 aa12.64□□□□□ -0.39
LINC01477-201ENST00000566101 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
LINC01477-201ENST00000566101 TPCN2Q8NHX9 752 aa12.64□□□□□ -0.39
LINC01477-201ENST00000566101 SOS2Q07890 1332 aaPredicted RBP12.63□□□□□ -0.39
LINC01477-201ENST00000566101 FIGNL2A6NMB9 653 aa12.63□□□□□ -0.39
LINC01477-201ENST00000566101 PTK7Q13308 1070 aa12.63□□□□□ -0.39
LINC01477-201ENST00000566101 TRIM50Q86XT4 487 aa12.63□□□□□ -0.39
LINC01477-201ENST00000566101 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC01477-201ENST00000566101 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
LINC01477-201ENST00000566101 POLMQ9NP87 494 aaPredicted RBP12.63□□□□□ -0.39
LINC01477-201ENST00000566101 HRH3Q9Y5N1 445 aa12.63□□□□□ -0.39
LINC01477-201ENST00000566101 FANCD2Q9BXW9 1451 aa12.63□□□□□ -0.39
LINC01477-201ENST00000566101 CCDC102BQ68D86 513 aa12.62□□□□□ -0.39
LINC01477-201ENST00000566101 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
LINC01477-201ENST00000566101 XAGE2Q96GT9 111 aa12.62□□□□□ -0.39
LINC01477-201ENST00000566101 TRIM47Q96LD4 638 aa12.62□□□□□ -0.39
LINC01477-201ENST00000566101 SERTAD1Q9UHV2 236 aa12.62□□□□□ -0.39
LINC01477-201ENST00000566101 DNMT3LQ9UJW3 386 aa12.62□□□□□ -0.39
LINC01477-201ENST00000566101 INHAP05111 366 aa12.61□□□□□ -0.39
LINC01477-201ENST00000566101 TTLL8A6PVC2 850 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 SFI1A8K8P3 1242 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L15C9J2P7 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L10C9JJH3 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L13C9JLJ4 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L11C9JVI0 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L21D6R901 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L18D6R9N7 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L22D6RA61 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L17D6RBQ6 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L19D6RCP7 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L20D6RJB6 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 USP17L24Q0WX57 530 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 RNF217Q8TC41 542 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 ESYT1Q9BSJ8 1104 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 ZNF358Q9NW07 568 aa12.6□□□□□ -0.39
LINC01477-201ENST00000566101 URB2Q14146 1524 aaKnown RBP12.6□□□□□ -0.39
LINC01477-201ENST00000566101 CFTRP13569 1480 aa12.59□□□□□ -0.39
LINC01477-201ENST00000566101 C11orf95C9JLR9 678 aaPredicted RBP12.59□□□□□ -0.39
LINC01477-201ENST00000566101 ATP1A2P50993 1020 aa12.59□□□□□ -0.39
LINC01477-201ENST00000566101 CENPCQ03188 943 aa12.59□□□□□ -0.39
LINC01477-201ENST00000566101 LARGE2Q8N3Y3 721 aa12.59□□□□□ -0.39
LINC01477-201ENST00000566101 PBXIP1Q96AQ6 731 aa12.59□□□□□ -0.39
LINC01477-201ENST00000566101 LGR5O75473 907 aa12.58□□□□□ -0.4
LINC01477-201ENST00000566101 DPYDQ12882 1025 aa12.58□□□□□ -0.4
LINC01477-201ENST00000566101 LARP1Q6PKG0 1096 aaKnown RBP12.58□□□□□ -0.4
LINC01477-201ENST00000566101 SIX5Q8N196 739 aa12.58□□□□□ -0.4
LINC01477-201ENST00000566101 NLRP3Q96P20 1036 aa12.58□□□□□ -0.4
LINC01477-201ENST00000566101 ARXQ96QS3 562 aa12.58□□□□□ -0.4
LINC01477-201ENST00000566101 FHDC1Q9C0D6 1143 aaPredicted RBP12.58□□□□□ -0.4
LINC01477-201ENST00000566101 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
LINC01477-201ENST00000566101 FAM196BA6NMK8 535 aa12.57□□□□□ -0.4
LINC01477-201ENST00000566101 RNF144AP50876 292 aaPredicted RBP12.57□□□□□ -0.4
LINC01477-201ENST00000566101 SENP2Q9HC62 589 aa12.57□□□□□ -0.4
LINC01477-201ENST00000566101 ZMIZ1Q9ULJ6 1067 aa12.57□□□□□ -0.4
LINC01477-201ENST00000566101 WASLO00401 505 aaPredicted RBP12.56□□□□□ -0.4
LINC01477-201ENST00000566101 ESCO1Q5FWF5 840 aa12.56□□□□□ -0.4
LINC01477-201ENST00000566101 GRIP2Q9C0E4 1043 aa12.56□□□□□ -0.4
LINC01477-201ENST00000566101 USP3Q9Y6I4 520 aa12.56□□□□□ -0.4
LINC01477-201ENST00000566101 PRICKLE2Q7Z3G6 844 aa12.55□□□□□ -0.4
LINC01477-201ENST00000566101 ANKMY2Q8IV38 441 aa12.55□□□□□ -0.4
LINC01477-201ENST00000566101 TNS4Q8IZW8 715 aa12.55□□□□□ -0.4
LINC01477-201ENST00000566101 MAN1A2O60476 641 aa12.54□□□□□ -0.4
LINC01477-201ENST00000566101 ZNF787Q6DD87 383 aa12.54□□□□□ -0.4
LINC01477-201ENST00000566101 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
LINC01477-201ENST00000566101 STK32AQ8WU08 396 aa12.54□□□□□ -0.4
LINC01477-201ENST00000566101 SLC4A9Q96Q91 983 aa12.54□□□□□ -0.4
LINC01477-201ENST00000566101 NOVA2Q9UNW9 492 aaKnown RBP12.54□□□□□ -0.4
LINC01477-201ENST00000566101 RIMBP3CA6NJZ7 1639 aa12.53□□□□□ -0.4
LINC01477-201ENST00000566101 RIMBP3BA6NNM3 1639 aa12.53□□□□□ -0.4
LINC01477-201ENST00000566101 RIMBP3Q9UFD9 1639 aa12.53□□□□□ -0.4
LINC01477-201ENST00000566101 TLR1Q15399 786 aa12.53□□□□□ -0.4
LINC01477-201ENST00000566101 KIFC2Q96AC6 838 aa12.53□□□□□ -0.4
LINC01477-201ENST00000566101 ATG7O95352 703 aa12.52□□□□□ -0.41
LINC01477-201ENST00000566101 RHOQP17081 205 aa12.52□□□□□ -0.41
LINC01477-201ENST00000566101 SMTNP53814 917 aa12.52□□□□□ -0.41
LINC01477-201ENST00000566101 EPHA4P54764 986 aa12.52□□□□□ -0.41
LINC01477-201ENST00000566101 SLC27A3Q5K4L6 730 aa12.52□□□□□ -0.41
LINC01477-201ENST00000566101 GAS2L2Q8NHY3 880 aa12.52□□□□□ -0.41
LINC01477-201ENST00000566101 POU4F2Q12837 409 aa12.51□□□□□ -0.41
LINC01477-201ENST00000566101 TBCELQ5QJ74 424 aa12.51□□□□□ -0.41
LINC01477-201ENST00000566101 RSF1Q96T23 1441 aaPredicted RBP12.51□□□□□ -0.41
LINC01477-201ENST00000566101 A6NJY4 79 aa12.5□□□□□ -0.41
LINC01477-201ENST00000566101 GPC1P35052 558 aa12.5□□□□□ -0.41
LINC01477-201ENST00000566101 SEC13P55735 322 aa12.5□□□□□ -0.41
LINC01477-201ENST00000566101 IQSEC3Q9UPP2 1182 aaPredicted RBP12.5□□□□□ -0.41
LINC01477-201ENST00000566101 LYSMD3Q7Z3D4 306 aa12.49□□□□□ -0.41
LINC01477-201ENST00000566101 ZNF295-AS1Q8N0V1 137 aa12.49□□□□□ -0.41
LINC01477-201ENST00000566101 ZSCAN10Q96SZ4 725 aaPredicted RBP12.49□□□□□ -0.41
LINC01477-201ENST00000566101 CARNS1A5YM72 827 aa12.48□□□□□ -0.41
LINC01477-201ENST00000566101 MTFR1Q15390 333 aa12.48□□□□□ -0.41
LINC01477-201ENST00000566101 SENP3-EIF4A1A0A087X0R7 540 aa12.47□□□□□ -0.41
LINC01477-201ENST00000566101 PHKA2P46019 1235 aa12.47□□□□□ -0.41
LINC01477-201ENST00000566101 FOXK2Q01167 660 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms