RNA–Protein interactions for RNA: ENST00000566069.5

PALB2-204, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-204ENST00000566069 NR1H3Q13133 447 aa8.23□□□□□ -1.09
PALB2-204ENST00000566069 CNKSR1Q969H4 720 aa8.23□□□□□ -1.09
PALB2-204ENST00000566069 ESYT1Q9BSJ8 1104 aa8.23□□□□□ -1.09
PALB2-204ENST00000566069 GPAMQ9HCL2 828 aa8.23□□□□□ -1.09
PALB2-204ENST00000566069 NSFL1CQ9UNZ2 370 aaKnown RBP8.23□□□□□ -1.09
PALB2-204ENST00000566069 MCCD1P59942 119 aaPredicted RBP8.22□□□□□ -1.09
PALB2-204ENST00000566069 CDCA7Q9BWT1 371 aaPredicted RBP8.22□□□□□ -1.09
PALB2-204ENST00000566069 C2CD2LO14523 706 aa8.21□□□□□ -1.1
PALB2-204ENST00000566069 GNRH1P01148 92 aa8.21□□□□□ -1.1
PALB2-204ENST00000566069 BAG6P46379 1132 aa8.21□□□□□ -1.1
PALB2-204ENST00000566069 XAGE2Q96GT9 111 aa8.21□□□□□ -1.1
PALB2-204ENST00000566069 PCMTD1Q96MG8 357 aaPredicted RBP8.21□□□□□ -1.1
PALB2-204ENST00000566069 LINC00114Q6XXX2 140 aa8.2□□□□□ -1.1
PALB2-204ENST00000566069 EDARADDQ8WWZ3 215 aa8.2□□□□□ -1.1
PALB2-204ENST00000566069 CCDC85AQ96PX6 553 aaPredicted RBP8.2□□□□□ -1.1
PALB2-204ENST00000566069 FHDC1Q9C0D6 1143 aaPredicted RBP8.2□□□□□ -1.1
PALB2-204ENST00000566069 K7ELQ4 463 aaPredicted RBP8.19□□□□□ -1.1
PALB2-204ENST00000566069 SUV39H2Q9H5I1 410 aa8.19□□□□□ -1.1
PALB2-204ENST00000566069 MKL2Q9ULH7 1088 aa8.19□□□□□ -1.1
PALB2-204ENST00000566069 A0A1B0GTH6 734 aa8.18□□□□□ -1.1
PALB2-204ENST00000566069 TSGA10IPQ3SY00 556 aa8.18□□□□□ -1.1
PALB2-204ENST00000566069 C4orf17Q53FE4 359 aa8.18□□□□□ -1.1
PALB2-204ENST00000566069 ZSCAN10Q96SZ4 725 aaPredicted RBP8.18□□□□□ -1.1
PALB2-204ENST00000566069 RUBCNLQ9H714 662 aa8.18□□□□□ -1.1
PALB2-204ENST00000566069 NDFIP2Q9NV92 336 aa8.18□□□□□ -1.1
PALB2-204ENST00000566069 FURINP09958 794 aa8.17□□□□□ -1.1
PALB2-204ENST00000566069 CTBSQ01459 385 aa8.17□□□□□ -1.1
PALB2-204ENST00000566069 CEP126Q9P2H0 1117 aa8.17□□□□□ -1.1
PALB2-204ENST00000566069 GDF2Q9UK05 429 aaPredicted RBP8.17□□□□□ -1.1
PALB2-204ENST00000566069 BNIP3LO60238 219 aa8.16□□□□□ -1.1
PALB2-204ENST00000566069 STAU1O95793 577 aaKnown RBP8.16□□□□□ -1.1
PALB2-204ENST00000566069 MSX1P28360 303 aa8.16□□□□□ -1.1
PALB2-204ENST00000566069 PHF24Q9UPV7 400 aa8.16□□□□□ -1.1
PALB2-204ENST00000566069 LBRQ14739 615 aaKnown RBP8.15□□□□□ -1.1
PALB2-204ENST00000566069 MTMR14Q8NCE2 650 aa8.15□□□□□ -1.1
PALB2-204ENST00000566069 IL27Q8NEV9 243 aa8.15□□□□□ -1.1
PALB2-204ENST00000566069 RRAGCQ9HB90 399 aa8.15□□□□□ -1.1
PALB2-204ENST00000566069 ALYREFQ86V81 257 aaKnown RBP8.14□□□□□ -1.11
PALB2-204ENST00000566069 GOLGA6L1Q8N7Z2 621 aa8.14□□□□□ -1.11
PALB2-204ENST00000566069 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
PALB2-204ENST00000566069 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
PALB2-204ENST00000566069 ESF1Q9H501 851 aaKnown RBP8.14□□□□□ -1.11
PALB2-204ENST00000566069 GGA1Q9UJY5 639 aa8.14□□□□□ -1.11
PALB2-204ENST00000566069 HCN2Q9UL51 889 aa8.14□□□□□ -1.11
PALB2-204ENST00000566069 ATXN7L1Q9ULK2 861 aaPredicted RBP8.14□□□□□ -1.11
PALB2-204ENST00000566069 TMEM214Q6NUQ4 689 aaKnown RBP8.13□□□□□ -1.11
PALB2-204ENST00000566069 PHTF2Q8N3S3 785 aa8.13□□□□□ -1.11
PALB2-204ENST00000566069 Q8N3U1 123 aa8.13□□□□□ -1.11
PALB2-204ENST00000566069 BTBD6Q96KE9 485 aa8.13□□□□□ -1.11
PALB2-204ENST00000566069 ZNF330Q9Y3S2 320 aaPredicted RBP8.13□□□□□ -1.11
PALB2-204ENST00000566069 SOCS7O14512 581 aa8.12□□□□□ -1.11
PALB2-204ENST00000566069 FGFR3P22607 806 aa8.12□□□□□ -1.11
PALB2-204ENST00000566069 ITGB7P26010 798 aa8.12□□□□□ -1.11
PALB2-204ENST00000566069 GRIN2CQ14957 1233 aa8.12□□□□□ -1.11
PALB2-204ENST00000566069 PPARGC1BQ86YN6 1023 aaKnown RBP8.12□□□□□ -1.11
PALB2-204ENST00000566069 BANK1Q8NDB2 785 aa8.12□□□□□ -1.11
PALB2-204ENST00000566069 ZNF592Q92610 1267 aa8.12□□□□□ -1.11
PALB2-204ENST00000566069 SNRKQ9NRH2 765 aa8.12□□□□□ -1.11
PALB2-204ENST00000566069 DNAAF2Q9NVR5 837 aaKnown RBP8.12□□□□□ -1.11
PALB2-204ENST00000566069 C1QTNF9BB2RNN3 333 aa8.11□□□□□ -1.11
PALB2-204ENST00000566069 MYCP01106 439 aaPredicted RBP8.11□□□□□ -1.11
PALB2-204ENST00000566069 BMP4P12644 408 aa8.11□□□□□ -1.11
PALB2-204ENST00000566069 GNASQ5JWF2 1037 aa8.11□□□□□ -1.11
PALB2-204ENST00000566069 SLCO4C1Q6ZQN7 724 aa8.11□□□□□ -1.11
PALB2-204ENST00000566069 CD163Q86VB7 1156 aa8.11□□□□□ -1.11
PALB2-204ENST00000566069 RHBDD1Q8TEB9 315 aa8.11□□□□□ -1.11
PALB2-204ENST00000566069 CRISPLD1Q9H336 500 aa8.11□□□□□ -1.11
PALB2-204ENST00000566069 ETNK1Q9HBU6 452 aa8.11□□□□□ -1.11
PALB2-204ENST00000566069 CSB-PGBD3P0DP91 1061 aa8.1□□□□□ -1.11
PALB2-204ENST00000566069 EPXP11678 715 aa8.1□□□□□ -1.11
PALB2-204ENST00000566069 EFHC2Q5JST6 749 aa8.1□□□□□ -1.11
PALB2-204ENST00000566069 PGBD3Q8N328 593 aa8.1□□□□□ -1.11
PALB2-204ENST00000566069 KLF15Q9UIH9 416 aa8.1□□□□□ -1.11
PALB2-204ENST00000566069 NDUFB9Q9Y6M9 179 aa8.1□□□□□ -1.11
PALB2-204ENST00000566069 ZCCHC2Q9C0B9 1178 aaKnown RBP8.09□□□□□ -1.11
PALB2-204ENST00000566069 GNB5O14775 395 aa8.08□□□□□ -1.12
PALB2-204ENST00000566069 AMPD1P23109 780 aa8.08□□□□□ -1.12
PALB2-204ENST00000566069 CHRNA4P43681 627 aa8.08□□□□□ -1.12
PALB2-204ENST00000566069 DGKGP49619 791 aa8.08□□□□□ -1.12
PALB2-204ENST00000566069 ESCO1Q5FWF5 840 aa8.08□□□□□ -1.12
PALB2-204ENST00000566069 NEURL1BA8MQ27 555 aa8.07□□□□□ -1.12
PALB2-204ENST00000566069 ARAFP10398 606 aa8.07□□□□□ -1.12
PALB2-204ENST00000566069 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
PALB2-204ENST00000566069 CHIC2Q9UKJ5 165 aa8.07□□□□□ -1.12
PALB2-204ENST00000566069 ATP4AP20648 1035 aa8.06□□□□□ -1.12
PALB2-204ENST00000566069 USP4Q13107 963 aa8.06□□□□□ -1.12
PALB2-204ENST00000566069 PCDHGC4Q9Y5F7 938 aa8.06□□□□□ -1.12
PALB2-204ENST00000566069 GTF2E1P29083 439 aaPredicted RBP8.05□□□□□ -1.12
PALB2-204ENST00000566069 SCNN1DP51172 638 aa8.05□□□□□ -1.12
PALB2-204ENST00000566069 TLR1Q15399 786 aa8.05□□□□□ -1.12
PALB2-204ENST00000566069 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
PALB2-204ENST00000566069 NEUROD2Q15784 382 aa8.04□□□□□ -1.12
PALB2-204ENST00000566069 TPRNQ4KMQ1 711 aa8.04□□□□□ -1.12
PALB2-204ENST00000566069 ZNF295-AS1Q8N0V1 137 aa8.04□□□□□ -1.12
PALB2-204ENST00000566069 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.03□□□□□ -1.12
PALB2-204ENST00000566069 TNP2Q05952 138 aa8.03□□□□□ -1.12
PALB2-204ENST00000566069 IRF5Q13568 498 aa8.03□□□□□ -1.12
PALB2-204ENST00000566069 CHSY3Q70JA7 882 aa8.03□□□□□ -1.12
PALB2-204ENST00000566069 FCHSD1Q86WN1 690 aa8.03□□□□□ -1.12
PALB2-204ENST00000566069 DOLKQ9UPQ8 538 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms